FFCP PHASE1:Hg19::chr17:27044525..27044543,-: Difference between revisions
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{{FFCP | 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967835959707,0.322289439867886,0,0.535661815816973,1.05868461514708,0.561689566824178,1.46067277649303,0.458729283404541,0,2.0510303085114,0.135982980381829,0.436350690340377,0.5290268405154,2.60396512716726,1.38652688589425,1.29787968637137,2.27099564703142,1.63898357945543,3.92765353135455,1.63182127587171,2.6721740526556,2.48116228744081,1.50424523575425,0.757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.714193294391221,0.387533459016037,0.0620747142958579,3.92461519032147,0.636471582781649,1.0105859447911,0.435433495793923,2.05339980651169,0.606168477131288,0.215166616178029,0.99798106963804,1.87227517805241,1.49418284228802,1.9307228228694,0.449126010532934,0,0.488965776731466,2.03448089157869,0.665756774185513,0.201273793591026,0|short_description=p6@RAB34}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=83871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=181bp_to_ENST00000483554_5end | |||
|coexpression_cluster_id=C3621 | |||
|description=CAGE_peak_6_at_RAB34_5end | |||
|id=chr17:27044525..27044543,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-36!180;CL:0000183!3.77e-23!59;CL:0000222!5.49e-21!119;CL:0000680!9.38e-21!57;CL:0000056!9.38e-21!57;CL:0000355!9.38e-21!57;CL:0000187!1.03e-20!54;CL:0002321!3.74e-20!248;CL:0000220!9.99e-20!246;CL:0000393!2.32e-19!60;CL:0000211!2.32e-19!60;CL:0000192!4.53e-18!42;CL:0000514!4.53e-18!42;CL:0000012!2.65e-17!682;CL:0000548!7.24e-17!679;CL:0000004!7.24e-17!679;CL:0000255!7.24e-17!679;CL:0000359!2.74e-15!32;CL:0000144!1.58e-12!625;CL:0000057!1.25e-11!75;CL:0002371!2.46e-08!591;CL:0000003!7.24e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.72e-16;32!CL:0000192;1.36e-14;43!CL:0000187;1.05e-12;55!CL:0000393;4.75e-11;61!CL:0000211;4.75e-11;61!CL:0002494;2.42e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.16e-23,58;CL:0000056,1.16e-23,58;CL:0000355,1.16e-23,58;CL:0000187,1.29e-23,55;CL:0000393,1.28e-22,61;CL:0000211,1.28e-22,61;CL:0000222,2.24e-22,121;CL:0000192,2.67e-20,43;CL:0000514,2.67e-20,43;CL:0002321,8.65e-20,250;CL:0000359,4.01e-17,32;CL:0000057,5.68e-11,76;CL:0002494,2.92e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-14;43!CL:0000355;1.29e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.86e-20!70;UBERON:0000914!2.01e-19!83;UBERON:0002329!2.01e-19!83;UBERON:0003077!2.01e-19!83;UBERON:0003059!2.01e-19!83;UBERON:0007282!2.01e-19!83;UBERON:0009618!2.01e-19!83;UBERON:0007285!2.01e-19!83;UBERON:0000486!3.91e-18!82;UBERON:0001134!4.24e-18!61;UBERON:0002036!4.24e-18!61;UBERON:0003082!4.24e-18!61;UBERON:0002385!2.04e-17!63;UBERON:0001015!2.04e-17!63;UBERON:0000383!2.04e-17!63;UBERON:0005256!1.36e-16!143;UBERON:0003104!2.39e-16!238;UBERON:0009142!2.39e-16!238;UBERON:0002100!1.46e-14!216;UBERON:0000481!2.55e-13!347;UBERON:0002049!5.24e-12!79;UBERON:0007798!5.24e-12!79;UBERON:0004872!6.57e-12!84;UBERON:0001637!4.68e-11!42;UBERON:0003509!4.68e-11!42;UBERON:0004572!4.68e-11!42;UBERON:0003914!9.17e-11!118;UBERON:0001981!8.94e-10!60;UBERON:0007500!8.94e-10!60;UBERON:0004537!8.94e-10!60;UBERON:0006965!8.94e-10!60;UBERON:0000490!1.08e-09!138;UBERON:0000475!9.01e-09!365;UBERON:0004573!1.65e-08!33;UBERON:0004571!1.65e-08!33;UBERON:0000055!5.22e-08!69;UBERON:0004535!1.03e-07!110;UBERON:0000119!3.93e-07!312;UBERON:0001009!4.84e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.64e-08;33!UBERON:0004571;1.64e-08;33!UBERON:0001637;2.84e-08;42!UBERON:0003509;2.84e-08;42!UBERON:0004572;2.84e-08;42!UBERON:0003914;3.60e-07;74 | |||
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| |||
|short_description=p6@RAB34 | |||
}} |
Revision as of 12:46, 11 September 2013
Short description: | p6@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RAB34_5end |
Coexpression cluster: | C3621_Hepatic_Renal_Alveolar_Mesenchymal_Trabecular_Smooth_normal |
Association with transcript: | 181bp_to_ENST00000483554_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.16e-23 | 58 |
myoblast | 1.16e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-23 | 58 |
muscle cell | 1.29e-23 | 55 |
electrically responsive cell | 1.28e-22 | 61 |
electrically active cell | 1.28e-22 | 61 |
mesodermal cell | 2.24e-22 | 121 |
smooth muscle cell | 2.67e-20 | 43 |
smooth muscle myoblast | 2.67e-20 | 43 |
embryonic cell | 8.65e-20 | 250 |
vascular associated smooth muscle cell | 4.01e-17 | 32 |
fibroblast | 5.68e-11 | 76 |
cardiocyte | 2.92e-07 | 16 |
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