FFCP PHASE1:Hg19::chr17:19912640..19912695,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |||
|TSSclassifier=S | |||
|UniProt=B4DW07,B4E2A4,Q5M775 | |||
|association_with_transcript=0bp_to_ENST00000472876,NM_001243439_5end | |||
|description=CAGE_peak_2_at_SPECC1_5end | |||
|id=chr17:19912640..19912695,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.59e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-53!115;UBERON:0001049!8.83e-33!57;UBERON:0005068!8.83e-33!57;UBERON:0006241!8.83e-33!57;UBERON:0007135!8.83e-33!57;UBERON:0001017!1.28e-31!82;UBERON:0005743!4.13e-30!86;UBERON:0000073!8.62e-28!94;UBERON:0001016!8.62e-28!94;UBERON:0000955!1.40e-27!69;UBERON:0006238!1.40e-27!69;UBERON:0002616!1.44e-26!59;UBERON:0003080!2.56e-26!42;UBERON:0002780!6.24e-26!41;UBERON:0001890!6.24e-26!41;UBERON:0006240!6.24e-26!41;UBERON:0001893!1.46e-21!34;UBERON:0002020!1.73e-21!34;UBERON:0003528!1.73e-21!34;UBERON:0002346!4.11e-21!90;UBERON:0003075!4.16e-21!86;UBERON:0007284!4.16e-21!86;UBERON:0002791!7.01e-21!33;UBERON:0001869!2.49e-20!32;UBERON:0000956!7.97e-16!25;UBERON:0000203!7.97e-16!25;UBERON:0002619!2.14e-14!22;UBERON:0003056!3.30e-14!61;UBERON:0001950!4.71e-13!20;UBERON:0000924!7.01e-12!173;UBERON:0006601!7.01e-12!173;UBERON:0004121!1.25e-11!169;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0000033!3.59e-11!123;UBERON:0003076!1.11e-07!15;UBERON:0003057!1.11e-07!15;UBERON:0002420!3.08e-07!9;UBERON:0007245!3.08e-07!9;UBERON:0010009!3.08e-07!9;UBERON:0010011!3.08e-07!9;UBERON:0000454!3.08e-07!9;UBERON:0002308!3.93e-07!9;UBERON:0000125!3.93e-07!9;UBERON:0000178!4.60e-07!15;UBERON:0000179!4.60e-07!15;UBERON:0000463!4.60e-07!15;UBERON:0004732!9.66e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.65e-22;34!UBERON:0002020;5.65e-22;34!UBERON:0002780;5.92e-22;41!UBERON:0001890;5.92e-22;41!UBERON:0001893;6.98e-22;34!UBERON:0001869;1.08e-21;32!UBERON:0002791;1.21e-21;32!UBERON:0000073;2.78e-21;53!UBERON:0002616;2.78e-21;53!UBERON:0000956;2.19e-18;25!UBERON:0000203;2.19e-18;25!UBERON:0002619;1.34e-16;22!UBERON:0007023;5.59e-15;114!UBERON:0001950;6.16e-15;20!UBERON:0000955;6.23e-15;68!UBERON:0001017;3.52e-14;75!UBERON:0001016;5.97e-13;83!UBERON:0002420;1.25e-08;9!UBERON:0007245;1.25e-08;9!UBERON:0010009;1.25e-08;9!UBERON:0010011;1.25e-08;9!UBERON:0000454;1.25e-08;9!UBERON:0000178;1.50e-08;15!UBERON:0000179;1.50e-08;15!UBERON:0000463;1.50e-08;15!UBERON:0000125;1.69e-08;9!UBERON:0002308;1.69e-08;9!UBERON:0004732;3.10e-08;13!UBERON:0004733;1.79e-07;12!UBERON:0002028;1.79e-07;12!UBERON:0009663;4.45e-07;7!UBERON:0001894;7.74e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.52e-59,114;UBERON:0001049,2.63e-39,56;UBERON:0005068,2.63e-39,56;UBERON:0006241,2.63e-39,56;UBERON:0007135,2.63e-39,56;UBERON:0000073,3.34e-37,53;UBERON:0002616,3.34e-37,53;UBERON:0001017,1.35e-36,81;UBERON:0001016,3.94e-33,89;UBERON:0000955,1.49e-32,68;UBERON:0006238,1.49e-32,68;UBERON:0002780,6.63e-31,41;UBERON:0001890,6.63e-31,41;UBERON:0003080,6.63e-31,41;UBERON:0006240,6.63e-31,41;UBERON:0003075,6.03e-26,82;UBERON:0007284,6.03e-26,82;UBERON:0001893,1.77e-25,34;UBERON:0003528,2.19e-25,34;UBERON:0002020,2.19e-25,34;UBERON:0002346,1.18e-24,86;UBERON:0001869,6.02e-24,32;UBERON:0002791,6.53e-24,32;UBERON:0003056,1.28e-18,61;UBERON:0000956,2.30e-18,25;UBERON:0000203,2.30e-18,25;UBERON:0010371,1.44e-17,104;UBERON:0002619,1.40e-16,22;UBERON:0011216,7.45e-16,223;UBERON:0001950,6.36e-15,20;UBERON:0004121,1.48e-13,171;UBERON:0000924,1.48e-13,171;UBERON:0006601,1.48e-13,171;UBERON:0010314,9.42e-13,132;UBERON:0003076,1.77e-09,15;UBERON:0003057,1.77e-09,15;UBERON:0002420,1.28e-08,9;UBERON:0007245,1.28e-08,9;UBERON:0010009,1.28e-08,9;UBERON:0010011,1.28e-08,9;UBERON:0000454,1.28e-08,9;UBERON:0000125,1.73e-08,9;UBERON:0002308,1.73e-08,9;UBERON:0000178,2.10e-08,15;UBERON:0000179,2.10e-08,15;UBERON:0000463,2.10e-08,15;UBERON:0004732,2.60e-08,13;UBERON:0004733,1.49e-07,12;UBERON:0002028,1.49e-07,12;UBERON:0007277,1.49e-07,12;UBERON:0009663,4.61e-07,7;UBERON:0001894,8.14e-07,7;UBERON:0006222,8.14e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,6.00726944859629,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,1.60057375499824,0,2.82109249330279,8.87331560106276,12.8661959568511,10.168953807179,0.0764134057479513,0,0.0787107813136792,2.36018566109342,1.53531759238885,0.309632246632152,0,0,0,0.232401601740905,3.69640004467296,2.34880351467878,0.553995408531877,1.80490002723128,1.73608696572681,0.447830948479849,0,0.515151135268373,0.872389432677388,1.88937971844405,0.970336244751265,0.697287110717054,0.411167888021826,0.929119112685311,1.1507695692886,0.768482119587302,1.41889337933151,0.344745680736619,2.5819387343353,1.35426486594342,0.188242339542605,1.09162460023138,0.224723484445085,1.22433556948361,1.60464513538047,0.639337125799041,0.659702600373432,1.19678194572979,1.70489900213078,1.45104619314292,0.56738522469114,0.622822248995575,0,2.08593167368081,1.95469960234605,0,1.47311054395026,0.316462387440884,1.05627643155971,0.425208599930087,1.04829322754188,1.01095768031846,1.50176892841506,1.28580469357664,0.855038231223746,0.39783335439818,0.91332076882317,0,0,1.77901850772711,0.426730222566507,0,0.574752439954483,1.32208974556972,0.954053754535364,0,0,0.764546456250458,2.64342657158052,4.48406850385229,5.79444986505169,0.590129310341499,0.786021525498329,1.02800749499755,0,0,0.473447805734733,0,0.111410456885174,0,0.886135578334485,0.270803863765016,0,0,0,0,0,0.296573126324121,0.802622484269139,0,0.113309342697566,1.14966148080576,0.34362744548263,1.51811815211702,0.95569624297229,3.25541726928209,0.950452044448374,1.35517607169996,1.66382594500744,1.24930726552346,2.60454977248419,2.46338399076314,6.65302252641617,8.55808626507223,4.34473211648397,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0,0.175669571386252,7.66227591661619,0,0,0.649094787309367,1.21890816109487,1.86141144726411,0.953962497221368,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0.408308342509787,0,1.03325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,1.06023814657188,0.813357600086629,1.24393266018445,0.756962552626885,2.91981887260664,0,0,0,0,0,0.828147600278907,0.842923450390509,0.964044119533928,1.10293972732394,1.96091499683166,0.474541238222193,0.808987848960987,0.588664395376038,0,0,0,0,0,0,0,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0,0,0,0.290633938513962,0,15.7652236126702,17.1694446325791,22.5987645939442,20.1767934783746,18.4313952802515,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,5.51686128565396,4.9594342217689,3.9786341246722,4.06551398755941,2.60279707715243,7.73288812777695,0.167516265334349,4.46557126157214,0,0,1.24324654030811,0.12269149171914,0,0.271265023699736,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0,0,0.979005787313703,0.343143423810856,1.24060815673732,1.72571360654893,2.02782359826544,0,3.32870879020994,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.966875596732978,0.200506470303285,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,91.8698883146466,73.463361737997,0,0,0.650756789328606,0.515205058238611,0.27470839445503,0.82509499920588,0,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0,0.107420244868274,0.580066775656914,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,5.06658324714394,0.329294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,36.5362278647162,35.1733115285493,27.912712171534,9.05280746739598,10.2840568271549,23.9935125141305,23.2213518012389,23.0006301125338,0,66.4111100131718,0.245040215981032,0,1.00988449083511,0.142283686696828,1.91311527274587,0,0.191505370132367,2.96343015813436,0,0,0.228234679033192,0.156679895773023,7.51903431270201,2.37008488922245,1.605880751037,3.02699560786571,1.27753871307098,1.37402137902306,0,0.671028323677248,0.333698283423817,1.9538809540204,1.67043704337145,4.92349595790849,4.05683517713975,0,0,0,7.91144168068228,3.6408156524854,11.0328950434704,23.5833001849323,15.0409025384745,0.593929361665277,16.5866779133585,29.8244294329889,34.7453458533966,0,0,0.422250816255987,18.7293108956006,3.31540698637377,10.8331081577339,16.7720639303534,1.35393286007176,0,0.179736702294654,1.61119057208048,0,4.04437963111428,11.974154617347,0,23.2639859062852,29.5930233136306,1.99613798001194,4.42727193844896,0.0874599999961957,5.79999660347835,0.1137934482855,0,1.65471377237555,10.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| |||
|short_description=p2@SPECC1 | |||
}} |
Revision as of 12:34, 11 September 2013
Short description: | p2@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SPECC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472876, NM_001243439_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | B4DW07B4E2A4Q5M775 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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