FFCP PHASE1:Hg19::chr17:9066128..9066151,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9423|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8029|TSSclassifier=S|UniProt=|association_with_transcript=-100bp_to_ENST00000436734_5end|description=CAGE_peak_6_at_NTN1_5end|id=chr17:9066128..9066151,+|ontology_enrichment_celltype=CL:0000039!3.98e-12!7;CL:0000586!3.98e-12!7;CL:0002251!3.47e-10!21;CL:0002623!3.69e-09!3;CL:0002076!2.90e-08!43;CL:0002231!3.07e-08!3;CL:0002322!1.68e-07!5|ontology_enrichment_celltype_v019=CL:0002623;1.95e-31;3!CL:0000622;3.89e-19;5!CL:0002251;7.03e-18;20!CL:0000154;4.74e-16;6!CL:0002336;3.28e-11;1!CL:0002261;3.28e-11;1!CL:0002170;3.28e-11;1!CL:0000150;6.91e-11;9!CL:0002076;4.22e-09;42|ontology_enrichment_celltype_v019_2=CL:0002623,1.96e-31,3;CL:0000622,3.90e-19,5;CL:0002251,7.58e-18,20;CL:0000154,4.75e-16,6;CL:0002336,2.42e-11,1;CL:0002261,2.42e-11,1;CL:0002170,2.42e-11,1;CL:0002076,3.74e-11,42;CL:0000150,6.91e-11,9;CL:0000223,7.05e-08,58|ontology_enrichment_development_v019=UBERON:0009143;1.12e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001044!2.19e-11!6;UBERON:0003293!2.19e-11!6;UBERON:0003294!2.19e-11!6;UBERON:0010047!2.19e-11!6;UBERON:0000167!2.19e-11!6;UBERON:0000161!6.82e-11!35;UBERON:0003408!7.32e-09!10;UBERON:0000165!9.18e-09!28;UBERON:0000930!9.18e-09!28;UBERON:0000166!2.22e-08!21;UBERON:0007023!2.23e-08!115;UBERON:0000078!4.99e-08!18;UBERON:0003101!3.25e-07!22;UBERON:0000079!3.25e-07!22;UBERON:0001007!8.38e-07!155;UBERON:0001555!8.38e-07!155;UBERON:0007026!8.38e-07!155|ontology_enrichment_uberon_v019=UBERON:0001044;2.33e-27;6!UBERON:0003293;2.33e-27;6!UBERON:0003294;2.33e-27;6!UBERON:0010047;2.33e-27;6!UBERON:0003408;2.33e-27;6!UBERON:0000167;2.33e-27;6!UBERON:0006562;3.29e-21;2!UBERON:0003127;1.16e-20;2!UBERON:0001041;3.93e-18;14!UBERON:0004921;2.63e-15;33!UBERON:0000161;3.19e-13;19!UBERON:0000166;3.19e-13;19!UBERON:0000165;1.51e-12;28!UBERON:0002372;3.28e-11;1!UBERON:0001961;3.28e-11;1!UBERON:0001744;3.28e-11;1!UBERON:0001042;3.28e-11;1!UBERON:0001735;3.28e-11;1!UBERON:0001555;6.77e-08;54|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.67e-27,6;UBERON:0003293,2.67e-27,6;UBERON:0003294,2.67e-27,6;UBERON:0010047,2.67e-27,6;UBERON:0000167,2.67e-27,6;UBERON:0003127,7.79e-21,2;UBERON:0003408,1.67e-16,10;UBERON:0000165,3.66e-12,29;UBERON:0000930,3.66e-12,29;UBERON:0002372,1.78e-11,1;UBERON:0001961,1.78e-11,1;UBERON:0001744,1.78e-11,1;UBERON:0001735,1.78e-11,1;UBERON:0000166,1.92e-11,22;UBERON:0000161,1.08e-09,36;UBERON:0004921,1.43e-08,118;UBERON:0001007,4.66e-08,145;UBERON:0001555,4.66e-08,145;UBERON:0007026,4.66e-08,145;UBERON:0000153,2.96e-07,62;UBERON:0007811,2.96e-07,62;UBERON:0004119,3.93e-07,160;UBERON:0000925,3.93e-07,160;UBERON:0006595,3.93e-07,160;UBERON:0001444,5.11e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.63337622438398,1.39473591775749,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.93448862085349,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,2.2439411102443,1.08647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.978323094660449,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,2.27687636823834,0,0,0.293977192243133,0,0,0,0,0,0,3.006659511141,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.06074955665802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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9423 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8029 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-100bp_to_ENST00000436734_5end | |||
|description=CAGE_peak_6_at_NTN1_5end | |||
|id=chr17:9066128..9066151,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.98e-12!7;CL:0000586!3.98e-12!7;CL:0002251!3.47e-10!21;CL:0002623!3.69e-09!3;CL:0002076!2.90e-08!43;CL:0002231!3.07e-08!3;CL:0002322!1.68e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.95e-31;3!CL:0000622;3.89e-19;5!CL:0002251;7.03e-18;20!CL:0000154;4.74e-16;6!CL:0002336;3.28e-11;1!CL:0002261;3.28e-11;1!CL:0002170;3.28e-11;1!CL:0000150;6.91e-11;9!CL:0002076;4.22e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.96e-31,3;CL:0000622,3.90e-19,5;CL:0002251,7.58e-18,20;CL:0000154,4.75e-16,6;CL:0002336,2.42e-11,1;CL:0002261,2.42e-11,1;CL:0002170,2.42e-11,1;CL:0002076,3.74e-11,42;CL:0000150,6.91e-11,9;CL:0000223,7.05e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.12e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!2.19e-11!6;UBERON:0003293!2.19e-11!6;UBERON:0003294!2.19e-11!6;UBERON:0010047!2.19e-11!6;UBERON:0000167!2.19e-11!6;UBERON:0000161!6.82e-11!35;UBERON:0003408!7.32e-09!10;UBERON:0000165!9.18e-09!28;UBERON:0000930!9.18e-09!28;UBERON:0000166!2.22e-08!21;UBERON:0007023!2.23e-08!115;UBERON:0000078!4.99e-08!18;UBERON:0003101!3.25e-07!22;UBERON:0000079!3.25e-07!22;UBERON:0001007!8.38e-07!155;UBERON:0001555!8.38e-07!155;UBERON:0007026!8.38e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.33e-27;6!UBERON:0003293;2.33e-27;6!UBERON:0003294;2.33e-27;6!UBERON:0010047;2.33e-27;6!UBERON:0003408;2.33e-27;6!UBERON:0000167;2.33e-27;6!UBERON:0006562;3.29e-21;2!UBERON:0003127;1.16e-20;2!UBERON:0001041;3.93e-18;14!UBERON:0004921;2.63e-15;33!UBERON:0000161;3.19e-13;19!UBERON:0000166;3.19e-13;19!UBERON:0000165;1.51e-12;28!UBERON:0002372;3.28e-11;1!UBERON:0001961;3.28e-11;1!UBERON:0001744;3.28e-11;1!UBERON:0001042;3.28e-11;1!UBERON:0001735;3.28e-11;1!UBERON:0001555;6.77e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.67e-27,6;UBERON:0003293,2.67e-27,6;UBERON:0003294,2.67e-27,6;UBERON:0010047,2.67e-27,6;UBERON:0000167,2.67e-27,6;UBERON:0003127,7.79e-21,2;UBERON:0003408,1.67e-16,10;UBERON:0000165,3.66e-12,29;UBERON:0000930,3.66e-12,29;UBERON:0002372,1.78e-11,1;UBERON:0001961,1.78e-11,1;UBERON:0001744,1.78e-11,1;UBERON:0001735,1.78e-11,1;UBERON:0000166,1.92e-11,22;UBERON:0000161,1.08e-09,36;UBERON:0004921,1.43e-08,118;UBERON:0001007,4.66e-08,145;UBERON:0001555,4.66e-08,145;UBERON:0007026,4.66e-08,145;UBERON:0000153,2.96e-07,62;UBERON:0007811,2.96e-07,62;UBERON:0004119,3.93e-07,160;UBERON:0000925,3.93e-07,160;UBERON:0006595,3.93e-07,160;UBERON:0001444,5.11e-07,49 | |||
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|short_description=p6@NTN1 | |||
}} |
Revision as of 16:46, 11 September 2013
Short description: | p6@NTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000436734_5end |
EntrezGene: | NTN1 |
HGNC: | 8029 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.96e-31 | 3 |
acinar cell | 3.90e-19 | 5 |
epithelial cell of alimentary canal | 7.58e-18 | 20 |
protein secreting cell | 4.75e-16 | 6 |
buccal mucosa cell | 2.42e-11 | 1 |
endothelial cell of viscerocranial mucosa | 2.42e-11 | 1 |
keratinized cell of the oral mucosa | 2.42e-11 | 1 |
endo-epithelial cell | 3.74e-11 | 42 |
glandular epithelial cell | 6.91e-11 | 9 |
endodermal cell | 7.05e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.67e-27 | 6 |
gland of oral region | 2.67e-27 | 6 |
gland of foregut | 2.67e-27 | 6 |
oral gland | 2.67e-27 | 6 |
oral cavity | 2.67e-27 | 6 |
open tracheal system trachea | 7.79e-21 | 2 |
gland of gut | 1.67e-16 | 10 |
mouth | 3.66e-12 | 29 |
stomodeum | 3.66e-12 | 29 |
tonsil | 1.78e-11 | 1 |
mucosa-associated lymphoid tissue | 1.78e-11 | 1 |
lymphoid tissue | 1.78e-11 | 1 |
tonsillar ring | 1.78e-11 | 1 |
oral opening | 1.92e-11 | 22 |
orifice | 1.08e-09 | 36 |
subdivision of digestive tract | 1.43e-08 | 118 |
digestive system | 4.66e-08 | 145 |
digestive tract | 4.66e-08 | 145 |
primitive gut | 4.66e-08 | 145 |
anterior region of body | 2.96e-07 | 62 |
craniocervical region | 2.96e-07 | 62 |
endoderm-derived structure | 3.93e-07 | 160 |
endoderm | 3.93e-07 | 160 |
presumptive endoderm | 3.93e-07 | 160 |
subdivision of head | 5.11e-07 | 49 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.