FFCP PHASE1:Hg19::chr17:7751347..7751358,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23135|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29012|TSSclassifier=N|UniProt=|association_with_transcript=483bp_to_uc002gix.2_5end|coexpression_cluster_id=C17|description=CAGE_peak_16_at_KDM6B_5end|id=chr17:7751347..7751358,+|ontology_enrichment_celltype=CL:0002057!1.85e-27!42;CL:0000860!8.91e-25!45;CL:0000557!3.27e-20!71;CL:0000839!3.95e-19!70;CL:0000766!5.27e-18!76;CL:0002009!8.47e-17!65;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0002031!2.91e-13!124;CL:0000738!4.11e-12!140;CL:0000763!9.60e-12!112;CL:0000049!9.60e-12!112;CL:0002087!1.04e-09!119;CL:0000988!8.22e-09!182;CL:0000037!1.27e-08!172;CL:0000566!1.27e-08!172;CL:0002032!1.30e-08!165;CL:0000837!1.30e-08!165|ontology_enrichment_celltype_v019=CL:0000860;8.90e-67;33!CL:0002057;8.90e-67;33!CL:0000473;6.81e-55;39!CL:0000234;6.81e-55;39!CL:0000576;1.89e-33;48!CL:0000766;5.03e-26;69!CL:0000763;1.03e-13;100!CL:0000738;2.55e-09;136!CL:0002087;3.65e-09;104|ontology_enrichment_celltype_v019_2=CL:0000860,7.42e-64,42;CL:0002057,7.42e-64,42;CL:0000473,3.46e-62,48;CL:0000234,3.46e-62,48;CL:0000766,2.33e-49,72;CL:0002194,3.54e-49,59;CL:0000576,3.54e-49,59;CL:0000040,3.54e-49,59;CL:0000559,3.54e-49,59;CL:0000839,7.96e-49,66;CL:0000557,4.60e-48,67;CL:0002009,1.69e-47,61;CL:0000763,2.20e-35,108;CL:0000049,2.20e-35,108;CL:0002031,1.66e-28,120;CL:0000738,1.74e-27,136;CL:0002087,8.75e-27,115;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441|ontology_enrichment_development_v019=CL:0002057;1.50e-46;42!CL:0000049;6.22e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.40e-20!102;UBERON:0003061!3.40e-20!102;UBERON:0002193!1.24e-17!112;UBERON:0002371!2.12e-17!80;UBERON:0001474!4.07e-17!86;UBERON:0002405!6.61e-13!115;UBERON:0004765!1.75e-12!101;UBERON:0001434!1.75e-12!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.26e-42,76;UBERON:0001474,7.76e-39,82;UBERON:0004765,3.72e-35,90;UBERON:0002405,6.17e-34,93;UBERON:0002390,4.55e-32,98;UBERON:0003061,4.55e-32,98;UBERON:0001434,2.26e-31,100;UBERON:0002193,7.63e-29,108;UBERON:0002204,1.32e-17,167;UBERON:0003081,6.30e-14,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,8.39e-08,315;UBERON:0004120,8.39e-08,315;UBERON:0006603,8.39e-08,315|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,1.20326668482085,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,1.16214518452842,1.23350366406548,1.85823822537062,1.7261543539329,0.256160706529101,0.47296445977717,1.37898272294647,1.93645405075148,1.35426486594342,1.50593871634084,1.63743690034707,0.224723484445085,4.59125838556354,0.320929027076094,3.19668562899521,0.329851300186716,0.997318288108159,0,3.19230162491442,2.8369261234557,1.86846674698672,2.00998932205395,1.0429658368404,0.868755378820466,1.21079900526674,0.736555271975129,0.632924774881769,0,0.212604299965044,0,0,0,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,1.17903228824749,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7505500884621,0.088048434013226,0.621984346622316,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0.24538298343828,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.601519410909855,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0.507447609232169,0,0.5696471871741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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=483bp_to_uc002gix.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_16_at_KDM6B_5end | |||
|id=chr17:7751347..7751358,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.85e-27!42;CL:0000860!8.91e-25!45;CL:0000557!3.27e-20!71;CL:0000839!3.95e-19!70;CL:0000766!5.27e-18!76;CL:0002009!8.47e-17!65;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0002031!2.91e-13!124;CL:0000738!4.11e-12!140;CL:0000763!9.60e-12!112;CL:0000049!9.60e-12!112;CL:0002087!1.04e-09!119;CL:0000988!8.22e-09!182;CL:0000037!1.27e-08!172;CL:0000566!1.27e-08!172;CL:0002032!1.30e-08!165;CL:0000837!1.30e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.90e-67;33!CL:0002057;8.90e-67;33!CL:0000473;6.81e-55;39!CL:0000234;6.81e-55;39!CL:0000576;1.89e-33;48!CL:0000766;5.03e-26;69!CL:0000763;1.03e-13;100!CL:0000738;2.55e-09;136!CL:0002087;3.65e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.42e-64,42;CL:0002057,7.42e-64,42;CL:0000473,3.46e-62,48;CL:0000234,3.46e-62,48;CL:0000766,2.33e-49,72;CL:0002194,3.54e-49,59;CL:0000576,3.54e-49,59;CL:0000040,3.54e-49,59;CL:0000559,3.54e-49,59;CL:0000839,7.96e-49,66;CL:0000557,4.60e-48,67;CL:0002009,1.69e-47,61;CL:0000763,2.20e-35,108;CL:0000049,2.20e-35,108;CL:0002031,1.66e-28,120;CL:0000738,1.74e-27,136;CL:0002087,8.75e-27,115;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-46;42!CL:0000049;6.22e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.40e-20!102;UBERON:0003061!3.40e-20!102;UBERON:0002193!1.24e-17!112;UBERON:0002371!2.12e-17!80;UBERON:0001474!4.07e-17!86;UBERON:0002405!6.61e-13!115;UBERON:0004765!1.75e-12!101;UBERON:0001434!1.75e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.26e-42,76;UBERON:0001474,7.76e-39,82;UBERON:0004765,3.72e-35,90;UBERON:0002405,6.17e-34,93;UBERON:0002390,4.55e-32,98;UBERON:0003061,4.55e-32,98;UBERON:0001434,2.26e-31,100;UBERON:0002193,7.63e-29,108;UBERON:0002204,1.32e-17,167;UBERON:0003081,6.30e-14,203;UBERON:0002384,5.20e-09,371;UBERON:0000926,8.39e-08,315;UBERON:0004120,8.39e-08,315;UBERON:0006603,8.39e-08,315 | |||
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|short_description=p16@KDM6B | |||
}} |
Revision as of 16:15, 11 September 2013
Short description: | p16@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 483bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.42e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.42e-64 | 42 |
defensive cell | 3.46e-62 | 48 |
phagocyte | 3.46e-62 | 48 |
myeloid leukocyte | 2.33e-49 | 72 |
monopoietic cell | 3.54e-49 | 59 |
monocyte | 3.54e-49 | 59 |
monoblast | 3.54e-49 | 59 |
promonocyte | 3.54e-49 | 59 |
myeloid lineage restricted progenitor cell | 7.96e-49 | 66 |
granulocyte monocyte progenitor cell | 4.60e-48 | 67 |
macrophage dendritic cell progenitor | 1.69e-47 | 61 |
myeloid cell | 2.20e-35 | 108 |
common myeloid progenitor | 2.20e-35 | 108 |
hematopoietic lineage restricted progenitor cell | 1.66e-28 | 120 |
leukocyte | 1.74e-27 | 136 |
nongranular leukocyte | 8.75e-27 | 115 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.26e-42 | 76 |
bone element | 7.76e-39 | 82 |
skeletal element | 3.72e-35 | 90 |
immune system | 6.17e-34 | 93 |
hematopoietic system | 4.55e-32 | 98 |
blood island | 4.55e-32 | 98 |
skeletal system | 2.26e-31 | 100 |
hemolymphoid system | 7.63e-29 | 108 |
musculoskeletal system | 1.32e-17 | 167 |
lateral plate mesoderm | 6.30e-14 | 203 |
connective tissue | 5.20e-09 | 371 |
mesoderm | 8.39e-08 | 315 |
mesoderm-derived structure | 8.39e-08 | 315 |
presumptive mesoderm | 8.39e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.