FFCP PHASE1:Hg19::chr17:7578548..7578563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7157|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11998|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc010cnj.1_5end|description=CAGE_peak_7_at_TP53_5end|id=chr17:7578548..7578563,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000650;1.38e-09;2!CL:1000500;1.38e-09;2!CL:1000618;1.38e-09;2!CL:1001318;1.38e-09;2!CL:0002173;1.38e-09;2!CL:0002521;8.38e-07;3!CL:0002567;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000650,1.86e-09,2;CL:1000500,1.86e-09,2;CL:1000618,1.86e-09,2;CL:1001318,1.86e-09,2;CL:0002173,1.86e-09,2;CL:0002521,6.88e-07,3;CL:0002567,7.28e-07,3|ontology_enrichment_development_v019=UBERON:0009117;1.52e-07;10!UBERON:0005564;1.52e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002370;8.32e-10;2!UBERON:0005058;8.32e-10;2!UBERON:0009113;8.32e-10;2!UBERON:0003567;1.38e-09;2!UBERON:0003838;1.38e-09;2!UBERON:0003586;1.38e-09;2!UBERON:0005169;1.38e-09;2!UBERON:0002321;1.38e-09;2!UBERON:0005215;1.38e-09;2!UBERON:0002303;1.38e-09;2!UBERON:0002319;1.38e-09;2!UBERON:0000473;3.27e-09;8!UBERON:0003135;6.16e-07;11!UBERON:0002190;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.86e-09,2;UBERON:0003838,1.86e-09,2;UBERON:0003586,1.86e-09,2;UBERON:0005169,1.86e-09,2;UBERON:0002321,1.86e-09,2;UBERON:0005215,1.86e-09,2;UBERON:0002303,1.86e-09,2;UBERON:0002319,1.86e-09,2;UBERON:0000473,4.36e-09,8;UBERON:0002190,6.88e-07,3;UBERON:0003135,7.59e-07,11|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.759783069987479,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0.427114777637135,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0,0.178428988797162,0,0,0.601892199455438,2.27407504055985,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,1.16004861950546,0,0.15350367472613,0,0,0,0,0.178064071293475,0.661139661443912,0.192190067365106,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0.21787692703798,0.139423744278603,0.384751292518985,0.113942055847001,0.23056390438806,0.538545866458633,0,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,1.65355761355942,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0.171986032471617,0,0.0730893170861856,0,0.387956065953678,0.264768380074501,0,0.137041924646751,0,0,0.195551382734803,0,0.85381197895741,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,1.15580235960608,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0.272406812223151,0.160753148465019,0.825236619583403,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0.662091970365432,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.439656701034247,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0.665574309221114,0,0.138348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0.657852148736121,0,0.38582807654183,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.255788742607303,0.107824811396682,0,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.977734268540344,0.20170506870352,0.781514011233092,0,0,0,0,0,0.206686796501184,0,0,0,0,0.879356221798103,0.638812138197976,0.535701835878287,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0.51215543128185,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0.407955318967927,0,0.275684698604535,1.0028301571695,1.06090177505535,0,0,0,0,0,2.64814530327625,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0.0673520530145875,0.358611026963382,0,0,0.426909383510862,0,0,0,0,0,0,0.805095174364105,0|short_description=p7@TP53}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11998 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010cnj.1_5end | |||
|description=CAGE_peak_7_at_TP53_5end | |||
|id=chr17:7578548..7578563,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.38e-09;2!CL:1000500;1.38e-09;2!CL:1000618;1.38e-09;2!CL:1001318;1.38e-09;2!CL:0002173;1.38e-09;2!CL:0002521;8.38e-07;3!CL:0002567;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.86e-09,2;CL:1000500,1.86e-09,2;CL:1000618,1.86e-09,2;CL:1001318,1.86e-09,2;CL:0002173,1.86e-09,2;CL:0002521,6.88e-07,3;CL:0002567,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.52e-07;10!UBERON:0005564;1.52e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.32e-10;2!UBERON:0005058;8.32e-10;2!UBERON:0009113;8.32e-10;2!UBERON:0003567;1.38e-09;2!UBERON:0003838;1.38e-09;2!UBERON:0003586;1.38e-09;2!UBERON:0005169;1.38e-09;2!UBERON:0002321;1.38e-09;2!UBERON:0005215;1.38e-09;2!UBERON:0002303;1.38e-09;2!UBERON:0002319;1.38e-09;2!UBERON:0000473;3.27e-09;8!UBERON:0003135;6.16e-07;11!UBERON:0002190;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.86e-09,2;UBERON:0003838,1.86e-09,2;UBERON:0003586,1.86e-09,2;UBERON:0005169,1.86e-09,2;UBERON:0002321,1.86e-09,2;UBERON:0005215,1.86e-09,2;UBERON:0002303,1.86e-09,2;UBERON:0002319,1.86e-09,2;UBERON:0000473,4.36e-09,8;UBERON:0002190,6.88e-07,3;UBERON:0003135,7.59e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.759783069987479,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0.427114777637135,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0,0.178428988797162,0,0,0.601892199455438,2.27407504055985,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,1.16004861950546,0,0.15350367472613,0,0,0,0,0.178064071293475,0.661139661443912,0.192190067365106,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,1.17206543417515,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.828851746593443,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0.21787692703798,0.139423744278603,0.384751292518985,0.113942055847001,0.23056390438806,0.538545866458633,0,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0.802577647298789,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0,1.65355761355942,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.52418000472609,0.171986032471617,0,0.0730893170861856,0,0.387956065953678,0.264768380074501,0,0.137041924646751,0,0,0.195551382734803,0,0.85381197895741,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,1.15580235960608,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0.272406812223151,0.160753148465019,0.825236619583403,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0.662091970365432,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.439656701034247,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0.665574309221114,0,0.138348634936231,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,0.657852148736121,0,0.38582807654183,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.255788742607303,0.107824811396682,0,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.977734268540344,0.20170506870352,0.781514011233092,0,0,0,0,0,0.206686796501184,0,0,0,0,0.879356221798103,0.638812138197976,0.535701835878287,0,0,0,0.532214220975833,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0.51215543128185,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0.407955318967927,0,0.275684698604535,1.0028301571695,1.06090177505535,0,0,0,0,0,2.64814530327625,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0.0673520530145875,0.358611026963382,0,0,0.426909383510862,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p7@TP53 | |||
}} |
Revision as of 15:59, 11 September 2013
Short description: | p7@TP53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TP53_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010cnj.1_5end |
EntrezGene: | TP53 |
HGNC: | 11998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.86e-09 | 2 |
kidney interstitial cell | 1.86e-09 | 2 |
juxtaglomerular complex cell | 1.86e-09 | 2 |
renal interstitial pericyte | 1.86e-09 | 2 |
extraglomerular mesangial cell | 1.86e-09 | 2 |
subcutaneous fat cell | 6.88e-07 | 3 |
light melanocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.86e-09 | 2 |
abdominal segment connective tissue | 1.86e-09 | 2 |
trunk connective tissue | 1.86e-09 | 2 |
interstitial tissue | 1.86e-09 | 2 |
extraglomerular mesangium | 1.86e-09 | 2 |
kidney interstitium | 1.86e-09 | 2 |
juxtaglomerular apparatus | 1.86e-09 | 2 |
mesangium | 1.86e-09 | 2 |
testis | 4.36e-09 | 8 |
subcutaneous adipose tissue | 6.88e-07 | 3 |
male reproductive organ | 7.59e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.