FFCP PHASE1:Hg19::chr16:88861062..88861066,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:88861062..88861066,+|id=chr16:88861062..88861066,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000037;2.65e-09;1!CL:0001024;2.65e-09;1|ontology_enrichment_celltype_v019_2=CL:0001024,1.43e-09,1;CL:0000763,1.45e-08,108;CL:0000049,1.45e-08,108;CL:0000037,8.24e-07,168|ontology_enrichment_development_v019=UBERON:0005425;2.65e-09;1|ontology_enrichment_disease=DOID:1240!9.06e-17!39;DOID:8692!3.61e-14!31;DOID:2531!6.65e-13!51;DOID:0060083!6.65e-13!51|ontology_enrichment_disease_v019=DOID:8692;3.08e-35;31!DOID:1240;5.02e-24;39!DOID:2531;2.72e-13;51!DOID:0060083;2.72e-13;51!DOID:225;9.81e-10;1|ontology_enrichment_disease_v019_2=DOID:8692,2.72e-35,31;DOID:1240,1.22e-27,39;DOID:2531,1.17e-20,51;DOID:0060083,1.17e-20,51;DOID:225,8.68e-10,1;DOID:0050686,1.58e-07,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;2.65e-09;1!UBERON:0001785;2.65e-09;1!UBERON:0002464;2.65e-09;1!UBERON:0004904;2.65e-09;1!UBERON:0001021;2.65e-09;1!UBERON:0000178;8.60e-09;15!UBERON:0000179;8.60e-09;15!UBERON:0000463;8.60e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-09,1;UBERON:0001785,2.55e-09,1;UBERON:0002464,2.55e-09,1;UBERON:0004904,2.55e-09,1;UBERON:0001021,2.55e-09,1;UBERON:0003902,2.55e-09,1;UBERON:0005425,2.55e-09,1;UBERON:0000178,8.45e-09,15;UBERON:0000179,8.45e-09,15;UBERON:0000463,8.45e-09,15|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,1.76160263600908,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.390178042679635,1.80881695064044,1.38175008892924,0.289803085735052,0.593146252648242,0,0,0.793165398882963,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0,0,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.900273288253207,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.704387472105808,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,2.27858874869665,1.19115887728894,1.64544909234478,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0.995985806877798,0.956557636372934,1.79621434289535,0,1.69338866179106,1.29848776109822,2.24637742490767,3.42352018549788,0.313359791546046,0,0,0.802940375518498,1.00899853595524,0.425846237690326,1.37402137902306,1.53620382154229,0.223676107892416,0,1.75849285861836,2.50565556505718,0,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0,0,1.53471711068062,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.03423011972439,0,0,0.885741385813839,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0,0,0,0,1.41282230755522,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.370691816839509,0.417687798021821,0,0,0,0,0,0.728341138602278,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0,0,0,0,0.343972064943233,0,0,0,0,0.353024506766001,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:88861062..88861066,+ | |||
|id=chr16:88861062..88861066,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000037;2.65e-09;1!CL:0001024;2.65e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.43e-09,1;CL:0000763,1.45e-08,108;CL:0000049,1.45e-08,108;CL:0000037,8.24e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.65e-09;1 | |||
|ontology_enrichment_disease=DOID:1240!9.06e-17!39;DOID:8692!3.61e-14!31;DOID:2531!6.65e-13!51;DOID:0060083!6.65e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.08e-35;31!DOID:1240;5.02e-24;39!DOID:2531;2.72e-13;51!DOID:0060083;2.72e-13;51!DOID:225;9.81e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.72e-35,31;DOID:1240,1.22e-27,39;DOID:2531,1.17e-20,51;DOID:0060083,1.17e-20,51;DOID:225,8.68e-10,1;DOID:0050686,1.58e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.65e-09;1!UBERON:0001785;2.65e-09;1!UBERON:0002464;2.65e-09;1!UBERON:0004904;2.65e-09;1!UBERON:0001021;2.65e-09;1!UBERON:0000178;8.60e-09;15!UBERON:0000179;8.60e-09;15!UBERON:0000463;8.60e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-09,1;UBERON:0001785,2.55e-09,1;UBERON:0002464,2.55e-09,1;UBERON:0004904,2.55e-09,1;UBERON:0001021,2.55e-09,1;UBERON:0003902,2.55e-09,1;UBERON:0005425,2.55e-09,1;UBERON:0000178,8.45e-09,15;UBERON:0000179,8.45e-09,15;UBERON:0000463,8.45e-09,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,1.76160263600908,0,0,0,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.390178042679635,1.80881695064044,1.38175008892924,0.289803085735052,0.593146252648242,0,0,0.793165398882963,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0,0,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0.900273288253207,0.206105058476878,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0.704387472105808,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,2.27858874869665,1.19115887728894,1.64544909234478,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0.995985806877798,0.956557636372934,1.79621434289535,0,1.69338866179106,1.29848776109822,2.24637742490767,3.42352018549788,0.313359791546046,0,0,0.802940375518498,1.00899853595524,0.425846237690326,1.37402137902306,1.53620382154229,0.223676107892416,0,1.75849285861836,2.50565556505718,0,0.270455678475983,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0,0,1.53471711068062,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,1.03423011972439,0,0,0.885741385813839,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0,0,0,0,1.41282230755522,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.370691816839509,0.417687798021821,0,0,0,0,0,0.728341138602278,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0,0,0,0,0.343972064943233,0,0,0,0,0.353024506766001,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0.308801447160972,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,2.56060151265938,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0.509197589862076,0.212574920101683,1.11542187833102,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0,0.129177819672012,0.372448285775147,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr16:88861062..88861066,+ | |||
}} |
Revision as of 12:03, 11 September 2013
Short description: | p@chr16:88861062..88861066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:88861062..88861066, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.43e-09 | 1 |
myeloid cell | 1.45e-08 | 108 |
common myeloid progenitor | 1.45e-08 | 108 |
hematopoietic stem cell | 8.24e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-09 | 1 |
cranial nerve | 2.55e-09 | 1 |
nerve trunk | 2.55e-09 | 1 |
nerve connecting eye with brain | 2.55e-09 | 1 |
nerve | 2.55e-09 | 1 |
retinal neural layer | 2.55e-09 | 1 |
presumptive neural retina | 2.55e-09 | 1 |
blood | 8.45e-09 | 15 |
haemolymphatic fluid | 8.45e-09 | 15 |
organism substance | 8.45e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.72e-35 | 31 |
leukemia | 1.22e-27 | 39 |
hematologic cancer | 1.17e-20 | 51 |
immune system cancer | 1.17e-20 | 51 |
syndrome | 8.68e-10 | 1 |
organ system cancer | 1.58e-07 | 137 |
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