FFCP PHASE1:Hg19::chr16:82710111..82710115,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:82710111..82710115,+|id=chr16:82710111..82710115,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002623;1.31e-13;3!CL:0000622;2.36e-08;5!CL:0000154;4.97e-07;6|ontology_enrichment_celltype_v019_2=CL:0002623,1.14e-13,3;CL:0000622,2.17e-08,5;CL:0000154,4.64e-07,6|ontology_enrichment_development_v019=UBERON:0005062;9.81e-11;4!UBERON:0007284;9.81e-11;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3350;4.26e-10;2!DOID:4556;5.39e-07;3|ontology_enrichment_disease_v019_2=DOID:3350,6.88e-10,2;DOID:4556,8.30e-07,3|ontology_enrichment_uberon=UBERON:0004121!2.02e-09!169;UBERON:0000924!2.84e-09!173;UBERON:0006601!2.84e-09!173;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0000033!3.92e-08!123|ontology_enrichment_uberon_v019=UBERON:0003978;3.72e-14;3!UBERON:0000946;3.72e-14;3!UBERON:0002133;3.40e-10;2!UBERON:0001044;4.97e-07;6!UBERON:0003293;4.97e-07;6!UBERON:0003294;4.97e-07;6!UBERON:0010047;4.97e-07;6!UBERON:0003408;4.97e-07;6!UBERON:0000167;4.97e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.70e-14,3;UBERON:0009751,4.70e-14,3;UBERON:0000946,4.70e-14,3;UBERON:0002523,4.70e-14,3;UBERON:0005983,4.70e-14,3;UBERON:0002165,4.70e-14,3;UBERON:0002062,4.70e-14,3;UBERON:0007280,4.70e-14,3;UBERON:0002133,3.20e-10,2;UBERON:0001044,4.64e-07,6;UBERON:0003293,4.64e-07,6;UBERON:0003294,4.64e-07,6;UBERON:0010047,4.64e-07,6;UBERON:0000167,4.64e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0,0,0,0,0,0,0.625098097988558,1.34717623575702,0.450445921933289,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0,0.0920498986422993,0.161646056818812,1.06502877754984,0,0,0.773043412653187,2.18196896472668,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0,0,0,0,0.34779121492523,0,0.288732895522148,0,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,1.64381058040307,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,1.91381625495949,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.460404944679482,0.229628896329213,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0.689182862422653,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,3.57315594984836,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81239927631679,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,2.22617410045812,0.329607748453519,0,0.597743964753209,0,0,1.1249555075237,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0.0874599999961957,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0,1.11538995422883,0.461701551022782,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.593042257361244,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0.609414446062818,0.17472666824203,3.78369271437556,0,0,0,0,0,0.225980740780532,3.01492234222852,0.596143835108969,0.0633107959558787,0,0.561111741760736,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.836822770498666,0.407992870545287,0,0,0.136905378891993,0,0.859530882839914,0,1.3964120063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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:82710111..82710115,+ | |||
|id=chr16:82710111..82710115,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.31e-13;3!CL:0000622;2.36e-08;5!CL:0000154;4.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.14e-13,3;CL:0000622,2.17e-08,5;CL:0000154,4.64e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.81e-11;4!UBERON:0007284;9.81e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;4.26e-10;2!DOID:4556;5.39e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,6.88e-10,2;DOID:4556,8.30e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004121!2.02e-09!169;UBERON:0000924!2.84e-09!173;UBERON:0006601!2.84e-09!173;UBERON:0000153!1.94e-08!129;UBERON:0007811!1.94e-08!129;UBERON:0000033!3.92e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.72e-14;3!UBERON:0000946;3.72e-14;3!UBERON:0002133;3.40e-10;2!UBERON:0001044;4.97e-07;6!UBERON:0003293;4.97e-07;6!UBERON:0003294;4.97e-07;6!UBERON:0010047;4.97e-07;6!UBERON:0003408;4.97e-07;6!UBERON:0000167;4.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.70e-14,3;UBERON:0009751,4.70e-14,3;UBERON:0000946,4.70e-14,3;UBERON:0002523,4.70e-14,3;UBERON:0005983,4.70e-14,3;UBERON:0002165,4.70e-14,3;UBERON:0002062,4.70e-14,3;UBERON:0007280,4.70e-14,3;UBERON:0002133,3.20e-10,2;UBERON:0001044,4.64e-07,6;UBERON:0003293,4.64e-07,6;UBERON:0003294,4.64e-07,6;UBERON:0010047,4.64e-07,6;UBERON:0000167,4.64e-07,6 | |||
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| |||
|short_description=p@chr16:82710111..82710115,+ | |||
}} |
Revision as of 11:46, 11 September 2013
Short description: | p@chr16:82710111..82710115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:82710111..82710115, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.14e-13 | 3 |
acinar cell | 2.17e-08 | 5 |
protein secreting cell | 4.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
valve | 4.70e-14 | 3 |
cardiac mesenchyme | 4.70e-14 | 3 |
cardial valve | 4.70e-14 | 3 |
tunica intima | 4.70e-14 | 3 |
heart layer | 4.70e-14 | 3 |
endocardium | 4.70e-14 | 3 |
endocardial cushion | 4.70e-14 | 3 |
presumptive endocardium | 4.70e-14 | 3 |
atrioventricular valve | 3.20e-10 | 2 |
saliva-secreting gland | 4.64e-07 | 6 |
gland of oral region | 4.64e-07 | 6 |
gland of foregut | 4.64e-07 | 6 |
oral gland | 4.64e-07 | 6 |
oral cavity | 4.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 6.88e-10 | 2 |
lung large cell carcinoma | 8.30e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.