FFCP PHASE1:Hg19::chr16:67693846..67693890,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25070|TSSclassifier=S|UniProt=|association_with_transcript=283bp_to_AK125623_5end|description=CAGE_peak_3_at_ACD_5end|id=chr16:67693846..67693890,-|ontology_enrichment_celltype=CL:0000066!1.78e-07!254|ontology_enrichment_celltype_v019=CL:0002202;4.16e-11;9!CL:0002632;4.16e-11;9!CL:0000322;3.75e-09;3!CL:0002368;1.84e-07;13!CL:0000317;3.91e-07;2!CL:1000448;3.91e-07;2!CL:0002308;3.91e-07;2!CL:0002554;3.91e-07;2!CL:0002140;3.91e-07;2|ontology_enrichment_celltype_v019_2=CL:0002202,4.35e-11,9;CL:0002632,4.35e-11,9;CL:0000322,2.94e-09,3;CL:0002368,1.89e-07,13;CL:0002554,3.09e-07,2;CL:0000317,6.32e-07,2;CL:1000448,6.32e-07,2;CL:0002308,6.32e-07,2;CL:0002140,6.32e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!2.20e-07!239;DOID:162!6.41e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:3910,7.31e-07,2|ontology_enrichment_uberon=UBERON:0001869!1.90e-07!32;UBERON:0001893!2.79e-07!34;UBERON:0002020!3.09e-07!34;UBERON:0003528!3.09e-07!34;UBERON:0000956!7.06e-07!25;UBERON:0000203!7.06e-07!25;UBERON:0002619!7.93e-07!22;UBERON:0002791!8.15e-07!33|ontology_enrichment_uberon_v019=UBERON:0004821;3.75e-09;3!UBERON:0007499;3.75e-09;3!UBERON:0003215;3.75e-09;3!UBERON:0010368;3.75e-09;3!UBERON:0009911;3.75e-09;3!UBERON:0002299;3.75e-09;3!UBERON:0006524;3.75e-09;3!UBERON:0008874;3.75e-09;3!UBERON:0002169;3.75e-09;3!UBERON:0004894;3.75e-09;3!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15!UBERON:0002419;3.91e-07;2!UBERON:0007771;3.91e-07;2!UBERON:0003297;3.91e-07;2!UBERON:0001821;3.91e-07;2!UBERON:0003487;3.91e-07;2!UBERON:0001820;3.91e-07;2!UBERON:0000072;5.81e-07;37!UBERON:0009856;5.89e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004821,2.94e-09,3;UBERON:0003215,2.94e-09,3;UBERON:0010368,2.94e-09,3;UBERON:0009911,2.94e-09,3;UBERON:0002299,2.94e-09,3;UBERON:0006524,2.94e-09,3;UBERON:0008874,2.94e-09,3;UBERON:0002169,2.94e-09,3;UBERON:0004894,2.94e-09,3;UBERON:0007196,2.37e-08,15;UBERON:0001558,2.37e-08,15;UBERON:0002419,6.32e-07,2;UBERON:0007771,6.32e-07,2;UBERON:0003297,6.32e-07,2;UBERON:0001821,6.32e-07,2;UBERON:0003487,6.32e-07,2;UBERON:0001820,6.32e-07,2;UBERON:0005089,6.32e-07,2;UBERON:0005088,6.32e-07,2;UBERON:0008947,6.84e-07,38;UBERON:0003258,6.84e-07,38;UBERON:0004903,7.31e-07,2;UBERON:0002173,7.31e-07,2;UBERON:0002186,7.31e-07,2|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0,1.22866968250754,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,1.46062018077475,0.487932798790507,0.61560529038394,0.204000691244253,0,0.286235987131057,0.547497700291537,0.125542639594803,0.305653622991805,0.492603536699674,0,0,0.383829398097213,0,0,1.50602959389125,0.369754010166788,0,1.27952309238679,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0.670700859703636,0,0,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0.728590576585084,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.70296429550139,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0,3.64064544775211,1.43723628363248,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.900273288253207,0.309157587715317,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.201504196455281,0.508681776931463,0.386521706326594,0.272746120590835,0.860413786167011,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0,0,1.65629520055781,1.18009283054671,0.723033089650446,1.32352767278873,0.435758888184812,0.474541238222193,0.808987848960987,1.56977172100277,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25070 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=283bp_to_AK125623_5end | |||
|description=CAGE_peak_3_at_ACD_5end | |||
|id=chr16:67693846..67693890,- | |||
|ontology_enrichment_celltype=CL:0000066!1.78e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002202;4.16e-11;9!CL:0002632;4.16e-11;9!CL:0000322;3.75e-09;3!CL:0002368;1.84e-07;13!CL:0000317;3.91e-07;2!CL:1000448;3.91e-07;2!CL:0002308;3.91e-07;2!CL:0002554;3.91e-07;2!CL:0002140;3.91e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.35e-11,9;CL:0002632,4.35e-11,9;CL:0000322,2.94e-09,3;CL:0002368,1.89e-07,13;CL:0002554,3.09e-07,2;CL:0000317,6.32e-07,2;CL:1000448,6.32e-07,2;CL:0002308,6.32e-07,2;CL:0002140,6.32e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.20e-07!239;DOID:162!6.41e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3910,7.31e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.90e-07!32;UBERON:0001893!2.79e-07!34;UBERON:0002020!3.09e-07!34;UBERON:0003528!3.09e-07!34;UBERON:0000956!7.06e-07!25;UBERON:0000203!7.06e-07!25;UBERON:0002619!7.93e-07!22;UBERON:0002791!8.15e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004821;3.75e-09;3!UBERON:0007499;3.75e-09;3!UBERON:0003215;3.75e-09;3!UBERON:0010368;3.75e-09;3!UBERON:0009911;3.75e-09;3!UBERON:0002299;3.75e-09;3!UBERON:0006524;3.75e-09;3!UBERON:0008874;3.75e-09;3!UBERON:0002169;3.75e-09;3!UBERON:0004894;3.75e-09;3!UBERON:0007196;1.60e-08;15!UBERON:0001558;1.60e-08;15!UBERON:0002419;3.91e-07;2!UBERON:0007771;3.91e-07;2!UBERON:0003297;3.91e-07;2!UBERON:0001821;3.91e-07;2!UBERON:0003487;3.91e-07;2!UBERON:0001820;3.91e-07;2!UBERON:0000072;5.81e-07;37!UBERON:0009856;5.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004821,2.94e-09,3;UBERON:0003215,2.94e-09,3;UBERON:0010368,2.94e-09,3;UBERON:0009911,2.94e-09,3;UBERON:0002299,2.94e-09,3;UBERON:0006524,2.94e-09,3;UBERON:0008874,2.94e-09,3;UBERON:0002169,2.94e-09,3;UBERON:0004894,2.94e-09,3;UBERON:0007196,2.37e-08,15;UBERON:0001558,2.37e-08,15;UBERON:0002419,6.32e-07,2;UBERON:0007771,6.32e-07,2;UBERON:0003297,6.32e-07,2;UBERON:0001821,6.32e-07,2;UBERON:0003487,6.32e-07,2;UBERON:0001820,6.32e-07,2;UBERON:0005089,6.32e-07,2;UBERON:0005088,6.32e-07,2;UBERON:0008947,6.84e-07,38;UBERON:0003258,6.84e-07,38;UBERON:0004903,7.31e-07,2;UBERON:0002173,7.31e-07,2;UBERON:0002186,7.31e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0,1.22866968250754,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0,1.46062018077475,0.487932798790507,0.61560529038394,0.204000691244253,0,0.286235987131057,0.547497700291537,0.125542639594803,0.305653622991805,0.492603536699674,0,0,0.383829398097213,0,0,1.50602959389125,0.369754010166788,0,1.27952309238679,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0,0,0,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0.670700859703636,0,0,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0.728590576585084,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.267899184852239,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.70296429550139,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0,3.64064544775211,1.43723628363248,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.900273288253207,0.309157587715317,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.201504196455281,0.508681776931463,0.386521706326594,0.272746120590835,0.860413786167011,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0,0,1.65629520055781,1.18009283054671,0.723033089650446,1.32352767278873,0.435758888184812,0.474541238222193,0.808987848960987,1.56977172100277,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0,0.878002283269004,1.1240175325762,0.904760751704678,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,0.626909658919938,0.290633938513962,1.53353071666084,0.985326475791887,0.088048434013226,0.207328115540772,0,0.25248486685276,0.317489471460845,0,0,1.71072446022705,0.925447434329912,0.300343057843917,0,0.224262168690721,0.43596006883328,0.4400297149257,0.387815147273333,3.57656445851882,0,0,0,0.514414748524284,0,0.532844358032199,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.784596007954691,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.178428988797162,0.473107245101804,0,0,2.27407504055985,0,0,0.553107505625109,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0.213455115606889,0.606255142892519,1.66435439510497,0.30239029332968,0.992431231275107,0,0.280660094433074,0.128139149255701,1.53512174720011,0.321707842287215,0,0.462629081407967,0.710246901252508,0.328508624055237,0,0.348631135379878,0.120859449591622,1.20303882181971,0.0920809889358963,0.114814448164607,0.728364672026868,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0,0,0.680374821106063,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0,0.640986253728404,0.742585499285292,1.14853107599234,3.25030123018261,0,0.193341436584244,0.462145851343933,0.15350367472613,0.275673144969061,0.214840489736547,0.435050081742686,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0.10115778085555,1.85938219718914,0.31481234683064,0,0,0.532306030317022,0,1.11194531462352,0.286249773483982,0,0,0.190630193923825,1.02359116524534,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,1.65409603063837,2.65375590096488,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0.286822704408103,0,1.07001315444375,0,0,0,0,0.349934720244983,0.288666338176536,2.01090682660736,1.08890984861323,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.640944426764839,0.962479855263359,0,0.185803175125719,0,0,0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| |||
|short_description=p3@ACD | |||
}} |
Revision as of 11:13, 11 September 2013
Short description: | p3@ACD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ACD_5end |
Coexpression cluster: | NA |
Association with transcript: | 283bp_to_AK125623_5end |
EntrezGene: | ACD |
HGNC: | 25070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.35e-11 | 9 |
epithelial cell of lower respiratory tract | 4.35e-11 | 9 |
pneumocyte | 2.94e-09 | 3 |
respiratory epithelial cell | 1.89e-07 | 13 |
fibroblast of lymphatic vessel | 3.09e-07 | 2 |
sebum secreting cell | 6.32e-07 | 2 |
epithelial cell of sweat gland | 6.32e-07 | 2 |
epithelial cell of skin gland | 6.32e-07 | 2 |
acinar cell of sebaceous gland | 6.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary alveolus epithelium | 2.94e-09 | 3 |
alveolus | 2.94e-09 | 3 |
pulmonary lobule | 2.94e-09 | 3 |
lobule | 2.94e-09 | 3 |
alveolus of lung | 2.94e-09 | 3 |
alveolar system | 2.94e-09 | 3 |
pulmonary acinus | 2.94e-09 | 3 |
alveolar sac | 2.94e-09 | 3 |
alveolar wall | 2.94e-09 | 3 |
tracheobronchial tree | 2.37e-08 | 15 |
lower respiratory tract | 2.37e-08 | 15 |
skin gland | 6.32e-07 | 2 |
epidermis gland | 6.32e-07 | 2 |
gland of integumental system | 6.32e-07 | 2 |
sebaceous gland | 6.32e-07 | 2 |
skin sebaceous gland | 6.32e-07 | 2 |
sweat gland | 6.32e-07 | 2 |
sweat gland placode | 6.32e-07 | 2 |
sebaceous gland placode | 6.32e-07 | 2 |
respiratory primordium | 6.84e-07 | 38 |
endoderm of foregut | 6.84e-07 | 38 |
bronchoalveolar duct junction | 7.31e-07 | 2 |
alveolar duct | 7.31e-07 | 2 |
bronchiole | 7.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.31e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.