FFCP PHASE1:Hg19::chr16:30908194..30908197,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:30908194..30908197,-|id=chr16:30908194..30908197,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!2.03e-12!239;DOID:162!1.15e-11!235;DOID:0050687!4.88e-10!143|ontology_enrichment_disease_v019=DOID:4231;5.15e-21;2!DOID:1907;5.15e-21;2!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6|ontology_enrichment_disease_v019_2=DOID:4231,3.81e-21,2;DOID:1907,3.81e-21,2;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0001872;3.10e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0001872,3.49e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,3.41556718903533,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0.569219092059585,0,0,0,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0.124252535565433,0.235694034616795,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0.211312123358627,0,0,0.172214979660816,1.70254786070051,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0.261906694481422,0.655087670040387,0.147856086217045,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0.23248285073625,0.173858272302579,0.801711364730253,0,0,0,0,0.591660003652827,0.170426809518315,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr16:30908194..30908197,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:30908194..30908197,- | |||
|id=chr16:30908194..30908197,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.03e-12!239;DOID:162!1.15e-11!235;DOID:0050687!4.88e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:4231;5.15e-21;2!DOID:1907;5.15e-21;2!DOID:201;6.55e-08;6!DOID:0060100;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,3.81e-21,2;DOID:1907,3.81e-21,2;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0001872;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0001872,3.49e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.886917589850256,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,3.41556718903533,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0.569219092059585,0,0,0,0.261177619741208,0,0.171986032471617,0,0,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0.114536596165916,0,0.14405479798815,0.124252535565433,0.235694034616795,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0.5085370753095,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0.211312123358627,0,0,0.172214979660816,1.70254786070051,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0.261906694481422,0.655087670040387,0.147856086217045,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0.23248285073625,0.173858272302579,0.801711364730253,0,0,0,0,0.591660003652827,0.170426809518315,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr16:30908194..30908197,- | |||
}} |
Revision as of 10:12, 11 September 2013
Short description: | p@chr16:30908194..30908197, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:30908194..30908197, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
parietal lobe | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 3.81e-21 | 2 |
malignant fibroxanthoma | 3.81e-21 | 2 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.