FFCP PHASE1:Hg19::chr16:21164864..21164874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C19|description=CAGE_peak_at_chr16:21164864..21164874,+|id=chr16:21164864..21164874,+|ontology_enrichment_celltype=CL:0002150!1.38e-08!3;CL:0000861!1.38e-08!3|ontology_enrichment_celltype_v019=CL:0000322;1.67e-09;3|ontology_enrichment_celltype_v019_2=CL:0000322,1.54e-09,3|ontology_enrichment_development_v019=UBERON:0009117;6.67e-23;10!UBERON:0005564;6.67e-23;10|ontology_enrichment_disease=DOID:162!1.65e-24!235;DOID:14566!1.09e-23!239;DOID:0050686!1.88e-15!137;DOID:305!1.35e-14!106;DOID:0050687!2.13e-12!143;DOID:1036!6.30e-12!8;DOID:2531!4.32e-09!51;DOID:0060083!4.32e-09!51;DOID:3119!4.13e-08!14;DOID:1240!4.53e-07!39|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:3910;1.37e-13;2|ontology_enrichment_disease_v019_2=DOID:6193,2.78e-26,1;DOID:3350,7.30e-14,2;DOID:3910,1.21e-13,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;2.07e-28;8!UBERON:0003135;6.76e-21;11!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000991;2.65e-11;21!UBERON:0003101;8.06e-11;22!UBERON:0000079;8.06e-11;22!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0009856;1.92e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.17e-28,8;UBERON:0003135,7.00e-21,11;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0000991,2.70e-11,21;UBERON:0009196,2.70e-11,21;UBERON:0009117,2.70e-11,21;UBERON:0005564,2.70e-11,21;UBERON:0004176,8.20e-11,22;UBERON:0003101,8.20e-11,22;UBERON:0000079,8.20e-11,22;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,1.77977555204936,0,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.588187602953219,0.335643173951685,0.948768663620925,2.70192184266644,0,0.163232808159148,0.141353071433941,0,0,0,0,1.18608451472249,0,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,19.842691362713,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,4.1276647793188,0.677294319023596,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0.343189995723929,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0.333694205676207,0,0,0.560544326627578,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,2.50707539292375,1.74291005901951,3.7514978221865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0|short_description=p@chr16:21164864..21164874,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr16:21164864..21164874,+ | |||
|id=chr16:21164864..21164874,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.38e-08!3;CL:0000861!1.38e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.67e-23;10!UBERON:0005564;6.67e-23;10 | |||
|ontology_enrichment_disease=DOID:162!1.65e-24!235;DOID:14566!1.09e-23!239;DOID:0050686!1.88e-15!137;DOID:305!1.35e-14!106;DOID:0050687!2.13e-12!143;DOID:1036!6.30e-12!8;DOID:2531!4.32e-09!51;DOID:0060083!4.32e-09!51;DOID:3119!4.13e-08!14;DOID:1240!4.53e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:3910;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.78e-26,1;DOID:3350,7.30e-14,2;DOID:3910,1.21e-13,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.07e-28;8!UBERON:0003135;6.76e-21;11!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000991;2.65e-11;21!UBERON:0003101;8.06e-11;22!UBERON:0000079;8.06e-11;22!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0009856;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.17e-28,8;UBERON:0003135,7.00e-21,11;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0000991,2.70e-11,21;UBERON:0009196,2.70e-11,21;UBERON:0009117,2.70e-11,21;UBERON:0005564,2.70e-11,21;UBERON:0004176,8.20e-11,22;UBERON:0003101,8.20e-11,22;UBERON:0000079,8.20e-11,22;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,1.77977555204936,0,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.588187602953219,0.335643173951685,0.948768663620925,2.70192184266644,0,0.163232808159148,0.141353071433941,0,0,0,0,1.18608451472249,0,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,19.842691362713,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,4.1276647793188,0.677294319023596,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0.343189995723929,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0.333694205676207,0,0,0.560544326627578,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,2.50707539292375,1.74291005901951,3.7514978221865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr16:21164864..21164874,+ | |||
}} |
Revision as of 09:37, 11 September 2013
Short description: | p@chr16:21164864..21164874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:21164864..21164874, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.17e-28 | 8 |
male reproductive organ | 7.00e-21 | 11 |
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
gonad | 2.70e-11 | 21 |
indifferent external genitalia | 2.70e-11 | 21 |
indifferent gonad | 2.70e-11 | 21 |
gonad primordium | 2.70e-11 | 21 |
external genitalia | 8.20e-11 | 22 |
male organism | 8.20e-11 | 22 |
male reproductive system | 8.20e-11 | 22 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.78e-26 | 1 |
mesenchymal cell neoplasm | 7.30e-14 | 2 |
lung adenocarcinoma | 1.21e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.