FFCP PHASE1:Hg19::chr16:7354032..7354043,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C97|description=CAGE_peak_at_chr16:7354032..7354043,+|id=chr16:7354032..7354043,+|ontology_enrichment_celltype=CL:0000242!6.29e-10!2|ontology_enrichment_celltype_v019=CL:0000123;9.94e-28;2!CL:0000242;9.94e-28;2!CL:0000312;1.06e-11;5!CL:0000240;6.64e-10;6!CL:0000311;6.64e-10;6!CL:0000079;6.64e-10;6!CL:0000237;6.64e-10;6!CL:0000362;6.89e-07;9|ontology_enrichment_celltype_v019_2=CL:0000242,8.13e-28,2;CL:0000312,9.77e-12,5;CL:0000240,6.21e-10,6;CL:0000311,6.21e-10,6;CL:0000079,6.21e-10,6;CL:0000237,6.21e-10,6;CL:0000036,6.21e-10,6;CL:0000357,6.21e-10,6;CL:0000114,6.21e-10,6;CL:0000362,6.60e-07,9|ontology_enrichment_development_v019=CL:0000357;6.64e-10;6!CL:0000114;6.64e-10;6!UBERON:0010122;4.08e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;6.35e-08;2!DOID:4236;6.35e-08;2|ontology_enrichment_disease_v019_2=DOID:154,4.69e-08,2;DOID:4236,4.69e-08,2|ontology_enrichment_uberon=UBERON:0001049!1.20e-52!57;UBERON:0005068!1.20e-52!57;UBERON:0006241!1.20e-52!57;UBERON:0007135!1.20e-52!57;UBERON:0002020!4.10e-47!34;UBERON:0003528!4.10e-47!34;UBERON:0001869!1.26e-45!32;UBERON:0002616!2.41e-43!59;UBERON:0001893!9.89e-43!34;UBERON:0001017!1.05e-42!82;UBERON:0002780!1.54e-42!41;UBERON:0001890!1.54e-42!41;UBERON:0006240!1.54e-42!41;UBERON:0000955!6.47e-42!69;UBERON:0006238!6.47e-42!69;UBERON:0003080!2.03e-41!42;UBERON:0005743!2.05e-40!86;UBERON:0002791!1.16e-39!33;UBERON:0000073!1.99e-38!94;UBERON:0001016!1.99e-38!94;UBERON:0002619!1.19e-37!22;UBERON:0007023!1.75e-35!115;UBERON:0003075!3.02e-35!86;UBERON:0007284!3.02e-35!86;UBERON:0002346!2.24e-33!90;UBERON:0000956!6.93e-33!25;UBERON:0000203!6.93e-33!25;UBERON:0001950!2.91e-31!20;UBERON:0003056!4.99e-27!61;UBERON:0000200!6.14e-25!6;UBERON:0000033!1.95e-22!123;UBERON:0004121!2.57e-21!169;UBERON:0000153!4.44e-21!129;UBERON:0007811!4.44e-21!129;UBERON:0000924!1.20e-20!173;UBERON:0006601!1.20e-20!173;UBERON:0000369!1.48e-16!4;UBERON:0002435!1.48e-16!4;UBERON:0000204!1.48e-16!4;UBERON:0010082!1.48e-16!4;UBERON:0002308!1.36e-15!9;UBERON:0000125!1.36e-15!9;UBERON:0002771!1.67e-13!3;UBERON:0000025!6.40e-13!194;UBERON:0005383!7.09e-13!3;UBERON:0005382!7.09e-13!3;UBERON:0003076!4.52e-12!15;UBERON:0003057!4.52e-12!15;UBERON:0004111!9.71e-11!241;UBERON:0000483!1.43e-10!309;UBERON:0000119!2.18e-10!312;UBERON:0009663!1.68e-09!7;UBERON:0001873!2.15e-09!2;UBERON:0010122!2.15e-09!2;UBERON:0001870!2.99e-09!2;UBERON:0000475!3.94e-09!365;UBERON:0001954!5.99e-09!2;UBERON:0003022!5.99e-09!2;UBERON:0002421!5.99e-09!2;UBERON:0002600!5.99e-09!2;UBERON:0002148!7.33e-09!2;UBERON:0009662!7.33e-09!2;UBERON:0001871!1.19e-08!7;UBERON:0000477!1.24e-08!286;UBERON:0002021!1.67e-08!5;UBERON:0001872!2.81e-08!5;UBERON:0000064!5.60e-08!219;UBERON:0002298!6.18e-08!8;UBERON:0004733!6.26e-08!12;UBERON:0002028!6.26e-08!12;UBERON:0007277!6.26e-08!12;UBERON:0000349!9.12e-08!5;UBERON:0002420!2.13e-07!9;UBERON:0007245!2.13e-07!9;UBERON:0010009!2.13e-07!9;UBERON:0010011!2.13e-07!9;UBERON:0000454!2.13e-07!9;UBERON:0004732!2.68e-07!13|ontology_enrichment_uberon_v019=UBERON:0001950;3.88e-30;20!UBERON:0002619;1.74e-27;22!UBERON:0002021;2.56e-24;5!UBERON:0000956;2.87e-24;25!UBERON:0000203;2.87e-24;25!UBERON:0002791;8.74e-22;32!UBERON:0001869;1.08e-20;32!UBERON:0001893;1.08e-20;34!UBERON:0003528;1.63e-18;34!UBERON:0002020;1.63e-18;34!UBERON:0002902;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0002780;3.33e-13;41!UBERON:0001890;3.33e-13;41!UBERON:0001872;1.58e-11;5!UBERON:0000200;9.25e-10;6!UBERON:0000955;2.19e-08;68!UBERON:0001873;4.08e-08;2!UBERON:0002771;6.35e-08;2!UBERON:0002702;6.35e-08;2!UBERON:0000073;7.40e-08;53!UBERON:0002616;7.40e-08;53!UBERON:0001017;1.79e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.91e-30,20;UBERON:0002619,2.56e-27,22;UBERON:0002791,1.01e-24,32;UBERON:0001869,1.01e-24,32;UBERON:0002021,1.53e-24,5;UBERON:0000956,4.03e-24,25;UBERON:0000203,4.03e-24,25;UBERON:0003528,2.84e-23,34;UBERON:0002020,2.84e-23,34;UBERON:0001893,2.84e-23,34;UBERON:0002780,2.76e-19,41;UBERON:0001890,2.76e-19,41;UBERON:0003080,2.76e-19,41;UBERON:0006240,2.76e-19,41;UBERON:0000955,1.02e-17,68;UBERON:0006238,1.02e-17,68;UBERON:0000073,7.61e-15,53;UBERON:0002616,7.61e-15,53;UBERON:0001017,8.93e-15,81;UBERON:0002902,1.07e-14,1;UBERON:0009899,1.07e-14,1;UBERON:0001049,5.02e-14,56;UBERON:0005068,5.02e-14,56;UBERON:0006241,5.02e-14,56;UBERON:0007135,5.02e-14,56;UBERON:0001016,3.20e-13,89;UBERON:0003056,7.78e-13,61;UBERON:0010371,1.82e-11,104;UBERON:0001872,2.41e-11,5;UBERON:0000200,1.32e-09,6;UBERON:0004121,1.47e-09,171;UBERON:0000924,1.47e-09,171;UBERON:0006601,1.47e-09,171;UBERON:0003075,2.15e-09,82;UBERON:0007284,2.15e-09,82;UBERON:0002346,6.33e-09,86;UBERON:0007023,1.93e-08,114;UBERON:0001873,4.09e-08,2;UBERON:0010122,4.09e-08,2;UBERON:0002771,7.52e-08,2;UBERON:0002702,9.19e-08,2|phas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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr16:7354032..7354043,+ | |||
|id=chr16:7354032..7354043,+ | |||
|ontology_enrichment_celltype=CL:0000242!6.29e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;9.94e-28;2!CL:0000242;9.94e-28;2!CL:0000312;1.06e-11;5!CL:0000240;6.64e-10;6!CL:0000311;6.64e-10;6!CL:0000079;6.64e-10;6!CL:0000237;6.64e-10;6!CL:0000362;6.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.13e-28,2;CL:0000312,9.77e-12,5;CL:0000240,6.21e-10,6;CL:0000311,6.21e-10,6;CL:0000079,6.21e-10,6;CL:0000237,6.21e-10,6;CL:0000036,6.21e-10,6;CL:0000357,6.21e-10,6;CL:0000114,6.21e-10,6;CL:0000362,6.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;6.64e-10;6!CL:0000114;6.64e-10;6!UBERON:0010122;4.08e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;6.35e-08;2!DOID:4236;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,4.69e-08,2;DOID:4236,4.69e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;3.88e-30;20!UBERON:0002619;1.74e-27;22!UBERON:0002021;2.56e-24;5!UBERON:0000956;2.87e-24;25!UBERON:0000203;2.87e-24;25!UBERON:0002791;8.74e-22;32!UBERON:0001869;1.08e-20;32!UBERON:0001893;1.08e-20;34!UBERON:0003528;1.63e-18;34!UBERON:0002020;1.63e-18;34!UBERON:0002902;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0002780;3.33e-13;41!UBERON:0001890;3.33e-13;41!UBERON:0001872;1.58e-11;5!UBERON:0000200;9.25e-10;6!UBERON:0000955;2.19e-08;68!UBERON:0001873;4.08e-08;2!UBERON:0002771;6.35e-08;2!UBERON:0002702;6.35e-08;2!UBERON:0000073;7.40e-08;53!UBERON:0002616;7.40e-08;53!UBERON:0001017;1.79e-07;75 | |||
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|short_description=p@chr16:7354032..7354043,+ | |||
}} |
Revision as of 11:30, 11 September 2013
Short description: | p@chr16:7354032..7354043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7354032..7354043, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.13e-28 | 2 |
keratinocyte | 9.77e-12 | 5 |
stratified squamous epithelial cell | 6.21e-10 | 6 |
keratin accumulating cell | 6.21e-10 | 6 |
stratified epithelial cell | 6.21e-10 | 6 |
keratinizing barrier epithelial cell | 6.21e-10 | 6 |
epithelial fate stem cell | 6.21e-10 | 6 |
stratified epithelial stem cell | 6.21e-10 | 6 |
surface ectodermal cell | 6.21e-10 | 6 |
epidermal cell | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 4.69e-08 | 2 |
carcinosarcoma | 4.69e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.