FFCP PHASE1:Hg19::chr15:101137121..101137155,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55180|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30922|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000560934_5end|coexpression_cluster_id=C18|description=CAGE_peak_3_at_LINS_5end|id=chr15:101137121..101137155,-|ontology_enrichment_celltype=CL:0000084!2.04e-31!25;CL:0000827!2.04e-31!25;CL:0000791!2.11e-31!18;CL:0000789!2.11e-31!18;CL:0002420!2.11e-31!18;CL:0002419!2.11e-31!18;CL:0000790!2.11e-31!18;CL:0000838!1.26e-24!52;CL:0000542!5.68e-24!53;CL:0000051!5.68e-24!53;CL:0000625!5.52e-20!11;CL:0002087!1.20e-13!119;CL:0000738!6.54e-13!140;CL:0002031!1.35e-12!124;CL:0000037!4.18e-12!172;CL:0000566!4.18e-12!172;CL:0000988!4.89e-12!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000624!1.62e-11!6|ontology_enrichment_celltype_v019=CL:0000791;2.39e-56;18!CL:0000789;2.39e-56;18!CL:0002419;2.39e-56;18!CL:0000084;4.48e-45;25!CL:0000625;6.88e-34;11!CL:0000624;6.82e-20;6!CL:0000815;3.63e-11;2!CL:0000792;3.63e-11;2!CL:0002677;3.63e-11;2!CL:0000542;6.26e-10;53!CL:0000898;1.04e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,1.88e-56,18;CL:0000789,1.88e-56,18;CL:0002420,1.88e-56,18;CL:0002419,1.88e-56,18;CL:0000790,1.88e-56,18;CL:0000084,3.96e-45,25;CL:0000827,3.96e-45,25;CL:0000625,3.26e-34,11;CL:0000838,1.67e-22,52;CL:0000542,5.26e-22,53;CL:0000051,5.26e-22,53;CL:0000624,7.72e-20,6;CL:0000815,3.64e-11,2;CL:0000792,3.64e-11,2;CL:0002677,3.64e-11,2;CL:0002087,4.17e-09,115;CL:0002031,1.43e-08,120;CL:0000898,1.04e-07,3;CL:0000738,3.99e-07,136|ontology_enrichment_development_v019=CL:0000790;2.39e-56;18!CL:0000051;6.26e-10;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.31e-10!15;UBERON:0000179!4.31e-10!15;UBERON:0000463!4.31e-10!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-10;15!UBERON:0000179;1.05e-10;15!UBERON:0000463;1.05e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.45e-10,15;UBERON:0000179,1.45e-10,15;UBERON:0000463,1.45e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,1.08505435357926,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,1.57367816091066,1.17903228824749,2.05601498999509,5.51715434789238,3.91106719960308,2.8406868344084,1.94826728407911,3.00808233589969,4.12448270464772,1.99380505125259,4.33286182024025,2.17755243533648,3.64166173167659,1.15106533222573,1.38175008892924,2.02862160014537,2.22429844743091,2.40786745280742,1.04535523804977,1.92625882585863,0.766440987203842,1.71813722741315,2.53019692019503,1.27426165729639,4.55758417699493,0.950452044448374,2.86092726247768,4.35154477925022,3.74792179657038,1.89421801635213,2.46338399076314,2.21767417547206,0.802320587350522,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,1.97030760201927,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,2.29391162142713,1.13929437434833,2.1440859791201,2.87953591160336,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0,0,0,0,0.111308705022906,1.15362711958732,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,1.24271716604159,0.496166021811951,0.790446527591777,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0,0,0.318235791390825,0,0,0,0.404112318087525,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0.961705476909699|short_description=p3@LINS}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30922 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000560934_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_LINS_5end | |||
|id=chr15:101137121..101137155,- | |||
|ontology_enrichment_celltype=CL:0000084!2.04e-31!25;CL:0000827!2.04e-31!25;CL:0000791!2.11e-31!18;CL:0000789!2.11e-31!18;CL:0002420!2.11e-31!18;CL:0002419!2.11e-31!18;CL:0000790!2.11e-31!18;CL:0000838!1.26e-24!52;CL:0000542!5.68e-24!53;CL:0000051!5.68e-24!53;CL:0000625!5.52e-20!11;CL:0002087!1.20e-13!119;CL:0000738!6.54e-13!140;CL:0002031!1.35e-12!124;CL:0000037!4.18e-12!172;CL:0000566!4.18e-12!172;CL:0000988!4.89e-12!182;CL:0002032!1.03e-11!165;CL:0000837!1.03e-11!165;CL:0000624!1.62e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.39e-56;18!CL:0000789;2.39e-56;18!CL:0002419;2.39e-56;18!CL:0000084;4.48e-45;25!CL:0000625;6.88e-34;11!CL:0000624;6.82e-20;6!CL:0000815;3.63e-11;2!CL:0000792;3.63e-11;2!CL:0002677;3.63e-11;2!CL:0000542;6.26e-10;53!CL:0000898;1.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.88e-56,18;CL:0000789,1.88e-56,18;CL:0002420,1.88e-56,18;CL:0002419,1.88e-56,18;CL:0000790,1.88e-56,18;CL:0000084,3.96e-45,25;CL:0000827,3.96e-45,25;CL:0000625,3.26e-34,11;CL:0000838,1.67e-22,52;CL:0000542,5.26e-22,53;CL:0000051,5.26e-22,53;CL:0000624,7.72e-20,6;CL:0000815,3.64e-11,2;CL:0000792,3.64e-11,2;CL:0002677,3.64e-11,2;CL:0002087,4.17e-09,115;CL:0002031,1.43e-08,120;CL:0000898,1.04e-07,3;CL:0000738,3.99e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.39e-56;18!CL:0000051;6.26e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.31e-10!15;UBERON:0000179!4.31e-10!15;UBERON:0000463!4.31e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-10;15!UBERON:0000179;1.05e-10;15!UBERON:0000463;1.05e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.45e-10,15;UBERON:0000179,1.45e-10,15;UBERON:0000463,1.45e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,1.08505435357926,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.709446689665756,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,1.57367816091066,1.17903228824749,2.05601498999509,5.51715434789238,3.91106719960308,2.8406868344084,1.94826728407911,3.00808233589969,4.12448270464772,1.99380505125259,4.33286182024025,2.17755243533648,3.64166173167659,1.15106533222573,1.38175008892924,2.02862160014537,2.22429844743091,2.40786745280742,1.04535523804977,1.92625882585863,0.766440987203842,1.71813722741315,2.53019692019503,1.27426165729639,4.55758417699493,0.950452044448374,2.86092726247768,4.35154477925022,3.74792179657038,1.89421801635213,2.46338399076314,2.21767417547206,0.802320587350522,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,1.97030760201927,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,2.29391162142713,1.13929437434833,2.1440859791201,2.87953591160336,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0,0,0,0,0,0.111308705022906,1.15362711958732,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,1.24271716604159,0.496166021811951,0.790446527591777,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,0,0,0.318235791390825,0,0,0,0.404112318087525,0.430333232356058,0,0,0,0,0,0,0,0,0,0.402547587182052,0.961705476909699 | |||
|short_description=p3@LINS | |||
}} |
Revision as of 06:18, 11 September 2013
Short description: | p3@LINS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LINS_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000560934_5end |
EntrezGene: | LINS |
HGNC: | 30922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.88e-56 | 18 |
alpha-beta T cell | 1.88e-56 | 18 |
immature T cell | 1.88e-56 | 18 |
mature T cell | 1.88e-56 | 18 |
immature alpha-beta T cell | 1.88e-56 | 18 |
T cell | 3.96e-45 | 25 |
pro-T cell | 3.96e-45 | 25 |
CD8-positive, alpha-beta T cell | 3.26e-34 | 11 |
lymphoid lineage restricted progenitor cell | 1.67e-22 | 52 |
lymphocyte | 5.26e-22 | 53 |
common lymphoid progenitor | 5.26e-22 | 53 |
CD4-positive, alpha-beta T cell | 7.72e-20 | 6 |
regulatory T cell | 3.64e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.64e-11 | 2 |
naive regulatory T cell | 3.64e-11 | 2 |
nongranular leukocyte | 4.17e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.43e-08 | 120 |
naive T cell | 1.04e-07 | 3 |
leukocyte | 3.99e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.45e-10 | 15 |
haemolymphatic fluid | 1.45e-10 | 15 |
organism substance | 1.45e-10 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.