FFCP PHASE1:Hg19::chr15:81589344..81589375,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3603|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5980|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_ENST00000558857_5end|coexpression_cluster_id=C18|description=CAGE_peak_3_at_IL16_5end|id=chr15:81589344..81589375,+|ontology_enrichment_celltype=CL:0000037!1.81e-65!172;CL:0000566!1.81e-65!172;CL:0000738!1.22e-62!140;CL:0002032!4.99e-60!165;CL:0000837!4.99e-60!165;CL:0000988!1.19e-59!182;CL:0002087!4.05e-53!119;CL:0002031!4.55e-51!124;CL:0000542!5.92e-32!53;CL:0000051!5.92e-32!53;CL:0000838!2.27e-31!52;CL:0000763!3.05e-27!112;CL:0000049!3.05e-27!112;CL:0000766!3.95e-26!76;CL:0000839!4.39e-21!70;CL:0000557!4.42e-20!71;CL:0002057!9.26e-20!42;CL:0002194!6.61e-19!63;CL:0000576!6.61e-19!63;CL:0000040!6.61e-19!63;CL:0000559!6.61e-19!63;CL:0002009!9.02e-18!65;CL:0000860!1.90e-17!45;CL:0000791!1.56e-16!18;CL:0000789!1.56e-16!18;CL:0002420!1.56e-16!18;CL:0002419!1.56e-16!18;CL:0000790!1.56e-16!18;CL:0000084!4.04e-15!25;CL:0000827!4.04e-15!25;CL:0000945!4.42e-15!24;CL:0000826!4.42e-15!24;CL:0000236!3.50e-11!14;CL:0000625!3.72e-11!11;CL:0000134!1.90e-09!358;CL:0002320!1.43e-08!365;CL:0000094!2.58e-07!8|ontology_enrichment_celltype_v019=CL:0000791;5.20e-21;18!CL:0000789;5.20e-21;18!CL:0002419;5.20e-21;18!CL:0000542;7.22e-21;53!CL:0000945;5.25e-18;24!CL:0002087;1.98e-17;104!CL:0000860;4.31e-16;33!CL:0002057;4.31e-16;33!CL:0000084;6.91e-16;25!CL:0000738;8.92e-15;136!CL:0000625;5.24e-14;11!CL:0000473;1.30e-13;39!CL:0000234;1.30e-13;39!CL:0000576;2.45e-13;48!CL:0000766;5.40e-13;69!CL:0000236;1.30e-11;13!CL:0000988;2.74e-11;177!CL:0000763;2.56e-09;100!CL:0000094;5.21e-09;8!CL:0000624;9.98e-08;6!CL:0000219;9.75e-07;193|ontology_enrichment_celltype_v019_2=CL:0000738,7.41e-74,136;CL:0000037,2.96e-73,168;CL:0000988,1.89e-67,177;CL:0002032,1.66e-66,161;CL:0000837,1.66e-66,161;CL:0002087,2.66e-62,115;CL:0002031,4.80e-57,120;CL:0000542,2.71e-36,53;CL:0000051,2.71e-36,53;CL:0000838,1.53e-35,52;CL:0000766,9.24e-31,72;CL:0000763,2.38e-29,108;CL:0000049,2.38e-29,108;CL:0000860,2.37e-24,42;CL:0002057,2.37e-24,42;CL:0000473,9.86e-24,48;CL:0000234,9.86e-24,48;CL:0000557,2.53e-23,67;CL:0000839,9.89e-23,66;CL:0002194,2.00e-22,59;CL:0000576,2.00e-22,59;CL:0000040,2.00e-22,59;CL:0000559,2.00e-22,59;CL:0002009,3.15e-21,61;CL:0000791,5.33e-21,18;CL:0000789,5.33e-21,18;CL:0002420,5.33e-21,18;CL:0002419,5.33e-21,18;CL:0000790,5.33e-21,18;CL:0000945,6.43e-18,24;CL:0000826,6.43e-18,24;CL:0000084,8.16e-16,25;CL:0000827,8.16e-16,25;CL:0000134,8.80e-16,354;CL:0002320,8.12e-15,361;CL:0000625,5.15e-14,11;CL:0000236,1.53e-12,14;CL:0000219,1.67e-11,386;CL:0000094,4.92e-09,8;CL:0002393,4.11e-08,9;CL:0002397,4.11e-08,9;CL:0000624,1.04e-07,6;CL:0000048,1.06e-07,427;CL:0000723,3.30e-07,433;CL:0000034,3.38e-07,441|ontology_enrichment_development_v019=CL:0000790;5.20e-21;18!CL:0000051;7.22e-21;53!CL:0002057;8.00e-18;42!CL:0000049;7.84e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.50e-27!102;UBERON:0003061!2.50e-27!102;UBERON:0002193!1.25e-24!112;UBERON:0007023!7.20e-18!115;UBERON:0002371!1.36e-16!80;UBERON:0002405!6.13e-15!115;UBERON:0001474!1.17e-14!86;UBERON:0004765!2.87e-10!101;UBERON:0001434!2.87e-10!101;UBERON:0000178!4.29e-08!15;UBERON:0000179!4.29e-08!15;UBERON:0000463!4.29e-08!15;UBERON:0002384!7.24e-08!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-10;15!UBERON:0000179;1.43e-10;15!UBERON:0000463;1.43e-10;15!UBERON:0002390;1.37e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.86e-33,98;UBERON:0003061,3.86e-33,98;UBERON:0002193,1.11e-30,108;UBERON:0002405,5.04e-22,93;UBERON:0002371,7.06e-20,76;UBERON:0001474,2.60e-17,82;UBERON:0004765,1.82e-14,90;UBERON:0002384,1.62e-13,371;UBERON:0001434,1.27e-11,100;UBERON:0000178,1.42e-10,15;UBERON:0000179,1.42e-10,15;UBERON:0000463,1.42e-10,15;UBERON:0003081,3.03e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25264782077874,5.58284008259631,6.76912719297642,9.8341069212226,11.8987113410136,12.0756576186539,0,0,0,3.33108962495297,2.13253848731132,5.87200878669694,4.9859586767869,4.01088894940283,4.12320654360118,0.895661896959697,7.12566065241755,0.515151135268373,5.81592955118259,5.29026321164333,6.79235371325885,3.48643555358527,3.70051099219643,3.09706370895104,1.43846196161075,1.7931249457037,0,3.10271112662957,3.87290810150296,2.70852973188684,4.1413314699373,3.547779950752,1.12361742222542,2.14258724659632,2.24650318953266,3.83602275479425,3.29851300186716,2.39356389145958,3.40979800426155,1.45104619314292,4.53908179752912,0,1.50749199154046,1.5644487552606,1.95469960234605,4.23779651843358,1.84138817993782,0.632924774881769,4.22510572623884,5.74031609905618,3.35453832813401,4.38081661471331,3.90459921387916,2.73233497385036,4.84521664360123,4.17725022118089,4.38393969035121,17.5996244461323,22.3916830617474,13.3426388079533,15.3622880123943,11.6114836240444,16.0930683187255,1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1166575,1.30630048738177,1.02669990325584,26.0652445166454,1.86477734020959,0.332660356546013,0,0,0,0,0,1.58913877437726,0,0.665756774185513,18.7184628039654,5.12909587685173|short_description=p3@IL16}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5980 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000558857_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_IL16_5end | |||
|id=chr15:81589344..81589375,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.81e-65!172;CL:0000566!1.81e-65!172;CL:0000738!1.22e-62!140;CL:0002032!4.99e-60!165;CL:0000837!4.99e-60!165;CL:0000988!1.19e-59!182;CL:0002087!4.05e-53!119;CL:0002031!4.55e-51!124;CL:0000542!5.92e-32!53;CL:0000051!5.92e-32!53;CL:0000838!2.27e-31!52;CL:0000763!3.05e-27!112;CL:0000049!3.05e-27!112;CL:0000766!3.95e-26!76;CL:0000839!4.39e-21!70;CL:0000557!4.42e-20!71;CL:0002057!9.26e-20!42;CL:0002194!6.61e-19!63;CL:0000576!6.61e-19!63;CL:0000040!6.61e-19!63;CL:0000559!6.61e-19!63;CL:0002009!9.02e-18!65;CL:0000860!1.90e-17!45;CL:0000791!1.56e-16!18;CL:0000789!1.56e-16!18;CL:0002420!1.56e-16!18;CL:0002419!1.56e-16!18;CL:0000790!1.56e-16!18;CL:0000084!4.04e-15!25;CL:0000827!4.04e-15!25;CL:0000945!4.42e-15!24;CL:0000826!4.42e-15!24;CL:0000236!3.50e-11!14;CL:0000625!3.72e-11!11;CL:0000134!1.90e-09!358;CL:0002320!1.43e-08!365;CL:0000094!2.58e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.20e-21;18!CL:0000789;5.20e-21;18!CL:0002419;5.20e-21;18!CL:0000542;7.22e-21;53!CL:0000945;5.25e-18;24!CL:0002087;1.98e-17;104!CL:0000860;4.31e-16;33!CL:0002057;4.31e-16;33!CL:0000084;6.91e-16;25!CL:0000738;8.92e-15;136!CL:0000625;5.24e-14;11!CL:0000473;1.30e-13;39!CL:0000234;1.30e-13;39!CL:0000576;2.45e-13;48!CL:0000766;5.40e-13;69!CL:0000236;1.30e-11;13!CL:0000988;2.74e-11;177!CL:0000763;2.56e-09;100!CL:0000094;5.21e-09;8!CL:0000624;9.98e-08;6!CL:0000219;9.75e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.41e-74,136;CL:0000037,2.96e-73,168;CL:0000988,1.89e-67,177;CL:0002032,1.66e-66,161;CL:0000837,1.66e-66,161;CL:0002087,2.66e-62,115;CL:0002031,4.80e-57,120;CL:0000542,2.71e-36,53;CL:0000051,2.71e-36,53;CL:0000838,1.53e-35,52;CL:0000766,9.24e-31,72;CL:0000763,2.38e-29,108;CL:0000049,2.38e-29,108;CL:0000860,2.37e-24,42;CL:0002057,2.37e-24,42;CL:0000473,9.86e-24,48;CL:0000234,9.86e-24,48;CL:0000557,2.53e-23,67;CL:0000839,9.89e-23,66;CL:0002194,2.00e-22,59;CL:0000576,2.00e-22,59;CL:0000040,2.00e-22,59;CL:0000559,2.00e-22,59;CL:0002009,3.15e-21,61;CL:0000791,5.33e-21,18;CL:0000789,5.33e-21,18;CL:0002420,5.33e-21,18;CL:0002419,5.33e-21,18;CL:0000790,5.33e-21,18;CL:0000945,6.43e-18,24;CL:0000826,6.43e-18,24;CL:0000084,8.16e-16,25;CL:0000827,8.16e-16,25;CL:0000134,8.80e-16,354;CL:0002320,8.12e-15,361;CL:0000625,5.15e-14,11;CL:0000236,1.53e-12,14;CL:0000219,1.67e-11,386;CL:0000094,4.92e-09,8;CL:0002393,4.11e-08,9;CL:0002397,4.11e-08,9;CL:0000624,1.04e-07,6;CL:0000048,1.06e-07,427;CL:0000723,3.30e-07,433;CL:0000034,3.38e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;5.20e-21;18!CL:0000051;7.22e-21;53!CL:0002057;8.00e-18;42!CL:0000049;7.84e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.50e-27!102;UBERON:0003061!2.50e-27!102;UBERON:0002193!1.25e-24!112;UBERON:0007023!7.20e-18!115;UBERON:0002371!1.36e-16!80;UBERON:0002405!6.13e-15!115;UBERON:0001474!1.17e-14!86;UBERON:0004765!2.87e-10!101;UBERON:0001434!2.87e-10!101;UBERON:0000178!4.29e-08!15;UBERON:0000179!4.29e-08!15;UBERON:0000463!4.29e-08!15;UBERON:0002384!7.24e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-10;15!UBERON:0000179;1.43e-10;15!UBERON:0000463;1.43e-10;15!UBERON:0002390;1.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.86e-33,98;UBERON:0003061,3.86e-33,98;UBERON:0002193,1.11e-30,108;UBERON:0002405,5.04e-22,93;UBERON:0002371,7.06e-20,76;UBERON:0001474,2.60e-17,82;UBERON:0004765,1.82e-14,90;UBERON:0002384,1.62e-13,371;UBERON:0001434,1.27e-11,100;UBERON:0000178,1.42e-10,15;UBERON:0000179,1.42e-10,15;UBERON:0000463,1.42e-10,15;UBERON:0003081,3.03e-07,203 | |||
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| |||
|short_description=p3@IL16 | |||
}} |
Revision as of 08:33, 11 September 2013
Short description: | p3@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IL16_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 15bp_to_ENST00000558857_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.86e-33 | 98 |
blood island | 3.86e-33 | 98 |
hemolymphoid system | 1.11e-30 | 108 |
immune system | 5.04e-22 | 93 |
bone marrow | 7.06e-20 | 76 |
bone element | 2.60e-17 | 82 |
skeletal element | 1.82e-14 | 90 |
connective tissue | 1.62e-13 | 371 |
skeletal system | 1.27e-11 | 100 |
blood | 1.42e-10 | 15 |
haemolymphatic fluid | 1.42e-10 | 15 |
organism substance | 1.42e-10 | 15 |
lateral plate mesoderm | 3.03e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.