FFCP PHASE1:Hg19::chr15:71145735..71145764,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54839|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25965|TSSclassifier=S|UniProt=|association_with_transcript=18bp_to_ENST00000558546,ENST00000558799_5end|description=CAGE_peak_4_at_LRRC49_5end|id=chr15:71145735..71145764,+|ontology_enrichment_celltype=CL:0000055!2.08e-08!180;CL:0002321!4.04e-08!248;CL:0000220!6.90e-08!246|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,5.17e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:193!2.03e-07!29|ontology_enrichment_disease_v019=DOID:193;4.20e-07;29|ontology_enrichment_disease_v019_2=DOID:193,2.87e-07,29|ontology_enrichment_uberon=UBERON:0005156!1.54e-07!59;UBERON:0000990!1.54e-07!59;UBERON:0000475!1.58e-07!365;UBERON:0000481!2.45e-07!347;UBERON:0002100!4.00e-07!216;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000486!9.12e-07!82|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.37129905888014,0,1.34465029290355,0.602694528023977,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,1.204823675113,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.40648818027883,0,1.50401373190767,0.869079113764942,0.795285947051099,2.91980922181582,1.70162670895322,0.443458794925128,0.263504357079378,0.654895377488563,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.2663051166458,2.91300197789081,5.16305917347865,0.709336764396714,1.12135520028461,0,1.2333377420858,0.622422070799533,2.2900814251847,0,0.756787138224657,2.88087962239999,3.74914290934075,0,0,0.149448680551801,0.587172493218824,0.647491777472526,0.140450806702248,0,0,0.619954687054593,1.18800285728205,0.494533858557114,0,1.43723628363248,0,0.250237039743928,0.277064115484183,0.877955241761676,0,0.150238058906597,0.453728732640084,0.358779271377724,0.640672166455702,1.05965950579781,0.300091096084402,0.515262646192195,1.8034837803194,0.744467425326359,0.337552664482532,0.779496041289589,1.00973509697646,1.10459878370759,1.77810662500693,0.355009592516614,0,0.169560592310488,0.966304265816484,1.09098448236334,0.573609190778008,0.609868530647977,0.530119073285941,0.232387885739037,0.621966330092223,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,3.37205259772859,0.201057944823262,2.31471112896324,0.977424915930974,0,0,1.04337364477569,2.58299127318808,0.721832238805369,0,0.761016608938393,0,0,0,0,0,1.87467667973554,4.36753533317035,3.68615252830205,1.07470227243418,1.45316969256981,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.448524337381443,0,0.22001485746285,3.74887975697556,0,0,0.531876233169741,0,0,0,0,1.85871391755592,0.542621605391443,0,0,1.77695974371273,0,1.20575750823834,0.871533458600294,1.79951384127703,0,0,0,2.63587341040741,1.14861935834114,0,1.73737568001095,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,2.44138521329762,1.66376689224646,1.42743191037729,0.788512075169673,1.40569697991256,2.10662269809403,0,1.03473071292505,0.664225598535437,0.368738337083406,1.99832313276591,0.391602314925481,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,1.48864684691266,1.07423381301644,0,1.15325234330131,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.492762936082855,0,0,0.120859449591622,0.200506470303285,0.736647911487171,1.03333003348146,1.63882051206045,1.96686622439136,0,1.77135275340154,0.784349769176855,0,1.68882606228601,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0,3.25378394664303,0.309123034943167,0,0.082509499920588,0,0,0,11.6971569133468,0.770243085573222,0,0.413509717453592,1.39646318328756,0,0.426133137080504,2.58192903375538,6.28082678371717,2.69066094311149,0.765676274967505,3.6416801107998,1.85938219718914,2.83331112147576,0,0.616067160352178,0,0.869932992075073,0.37064843820784,3.43499728180779,1.116475108079,0,0.762520775695299,0,6.41908482050881,0.636406495851874,1.56989728039846,0.179872457583315,0,0.706874414074119,0,1.58510321173008,0.421258456238981,0,1.46228093778771,0,2.18399858252777,2.2624869112594,1.13008116620243,0.551365343546124,1.99031692572366,1.75380354101505,0,0.655894752046633,0.608731130888112,0,0.563391205064483,0.717056761020258,3.14396931241988,0.35667105148125,0,2.11107635297664,0.987884678879706,0,0.349934720244983,2.79044126903985,1.34060455107157,3.26672954583968,0.28243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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54839 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25965 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000558546,ENST00000558799_5end | |||
|description=CAGE_peak_4_at_LRRC49_5end | |||
|id=chr15:71145735..71145764,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-08!180;CL:0002321!4.04e-08!248;CL:0000220!6.90e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.17e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.03e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:193;4.20e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:193,2.87e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.54e-07!59;UBERON:0000990!1.54e-07!59;UBERON:0000475!1.58e-07!365;UBERON:0000481!2.45e-07!347;UBERON:0002100!4.00e-07!216;UBERON:0003104!7.11e-07!238;UBERON:0009142!7.11e-07!238;UBERON:0000486!9.12e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@LRRC49 | |||
}} |
Revision as of 08:05, 11 September 2013
Short description: | p4@LRRC49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LRRC49_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000558546, ENST00000558799_5end |
EntrezGene: | LRRC49 |
HGNC: | 25965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.17e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.87e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.