FFCP PHASE1:Hg19::chr15:68358280..68358284,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2344|description=CAGE_peak_at_chr15:68358280..68358284,+|id=chr15:68358280..68358284,+|ontology_enrichment_celltype=CL:0000738!6.96e-19!140;CL:0002087!2.81e-17!119;CL:0000037!5.45e-15!172;CL:0000566!5.45e-15!172;CL:0002031!1.19e-14!124;CL:0000988!2.38e-13!182;CL:0002032!2.89e-13!165;CL:0000837!2.89e-13!165;CL:0000766!4.59e-10!76;CL:0002194!3.65e-09!63;CL:0000576!3.65e-09!63;CL:0000040!3.65e-09!63;CL:0000559!3.65e-09!63;CL:0002009!4.67e-09!65;CL:0000860!1.12e-08!45;CL:0000557!2.91e-08!71;CL:0000839!4.95e-08!70;CL:0002057!6.26e-08!42;CL:0000838!1.71e-07!52;CL:0000542!3.73e-07!53;CL:0000051!3.73e-07!53;CL:0000763!4.52e-07!112;CL:0000049!4.52e-07!112|ontology_enrichment_celltype_v019=CL:0000775;3.68e-20;3!CL:0000226;4.66e-19;3!CL:0000842;4.66e-19;3!CL:0002393;2.02e-17;6!CL:0002397;2.02e-17;6!CL:0000624;3.53e-10;6!CL:0000623;8.55e-10;3!CL:0000791;8.10e-09;18!CL:0000789;8.10e-09;18!CL:0002419;8.10e-09;18!CL:0000094;7.24e-08;8!CL:0002087;9.23e-08;104|ontology_enrichment_celltype_v019_2=CL:0000775,4.08e-20,3;CL:0000226,1.21e-19,3;CL:0000842,1.21e-19,3;CL:0000738,5.10e-18,136;CL:0002393,1.59e-17,9;CL:0002397,1.59e-17,9;CL:0002087,8.28e-16,115;CL:0000037,2.68e-15,168;CL:0000988,2.73e-14,177;CL:0002032,1.35e-11,161;CL:0000837,1.35e-11,161;CL:0000624,3.71e-10,6;CL:0002031,3.84e-10,120;CL:0000623,9.14e-10,3;CL:0000825,9.14e-10,3;CL:0000791,8.11e-09,18;CL:0000789,8.11e-09,18;CL:0002420,8.11e-09,18;CL:0002419,8.11e-09,18;CL:0000790,8.11e-09,18;CL:0000766,2.03e-08,72;CL:0000860,2.32e-08,42;CL:0002057,2.32e-08,42;CL:0000094,7.51e-08,8;CL:0000473,3.56e-07,48;CL:0000234,3.56e-07,48;CL:0000838,8.25e-07,52|ontology_enrichment_development_v019=CL:0000790;8.10e-09;18!UBERON:0005754;8.00e-08;1!UBERON:0010115;1.74e-07;1!CL:0002057;3.11e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.69e-09!112;UBERON:0002390!7.42e-09!102;UBERON:0003061!7.42e-09!102;UBERON:0007023!2.09e-07!115|ontology_enrichment_uberon_v019=UBERON:0000998;8.00e-08;1!UBERON:0006868;8.00e-08;1!UBERON:0002363;1.74e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.84e-08,1;UBERON:0006868,8.84e-08,1;UBERON:0002363,3.17e-07,1;UBERON:0007645,3.17e-07,1;UBERON:0007647,3.17e-07,1;UBERON:0010115,3.17e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0.764134057479513,0.656804715599566,0.472264687882075,0,0.383829398097213,0.619264493264304,0,0,0,0.542270404062111,0.142169232487422,0,2.76997704265939,3.60980005446255,3.68918480216948,0.447830948479849,0.971680998056939,0.515151135268373,0.436194716338694,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0,1.29096936716765,0,1.12945403725563,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0,1.13477044938228,0,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.316462387440884,0,1.27562579979026,0.209658645508376,0.673971786878971,0.450530678524519,0.64290234678832,1.14005097496499,0.99458338599545,0.182664153764634,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0.560508562981536,0,3.93419540227666,2.35806457649499,1.23360899399706,0,0.32592226663359,0.946895611469467,0,0.334231370655521,0.589211814949674,0.443067789167242,0.270803863765016,0.384273959177026,0.260118695119756,1.15106533222573,0.552700035571697,0.289803085735052,0.444859689486181,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,2.94184215361858,6.80674698249155,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.72038491523742,0,0,0.324547393654683,0,0.132957960518865,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0,0.675105328965065,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.491953754172454,0.171567810298526,0,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14478130666757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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2344 | |||
|description=CAGE_peak_at_chr15:68358280..68358284,+ | |||
|id=chr15:68358280..68358284,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.96e-19!140;CL:0002087!2.81e-17!119;CL:0000037!5.45e-15!172;CL:0000566!5.45e-15!172;CL:0002031!1.19e-14!124;CL:0000988!2.38e-13!182;CL:0002032!2.89e-13!165;CL:0000837!2.89e-13!165;CL:0000766!4.59e-10!76;CL:0002194!3.65e-09!63;CL:0000576!3.65e-09!63;CL:0000040!3.65e-09!63;CL:0000559!3.65e-09!63;CL:0002009!4.67e-09!65;CL:0000860!1.12e-08!45;CL:0000557!2.91e-08!71;CL:0000839!4.95e-08!70;CL:0002057!6.26e-08!42;CL:0000838!1.71e-07!52;CL:0000542!3.73e-07!53;CL:0000051!3.73e-07!53;CL:0000763!4.52e-07!112;CL:0000049!4.52e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.68e-20;3!CL:0000226;4.66e-19;3!CL:0000842;4.66e-19;3!CL:0002393;2.02e-17;6!CL:0002397;2.02e-17;6!CL:0000624;3.53e-10;6!CL:0000623;8.55e-10;3!CL:0000791;8.10e-09;18!CL:0000789;8.10e-09;18!CL:0002419;8.10e-09;18!CL:0000094;7.24e-08;8!CL:0002087;9.23e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.08e-20,3;CL:0000226,1.21e-19,3;CL:0000842,1.21e-19,3;CL:0000738,5.10e-18,136;CL:0002393,1.59e-17,9;CL:0002397,1.59e-17,9;CL:0002087,8.28e-16,115;CL:0000037,2.68e-15,168;CL:0000988,2.73e-14,177;CL:0002032,1.35e-11,161;CL:0000837,1.35e-11,161;CL:0000624,3.71e-10,6;CL:0002031,3.84e-10,120;CL:0000623,9.14e-10,3;CL:0000825,9.14e-10,3;CL:0000791,8.11e-09,18;CL:0000789,8.11e-09,18;CL:0002420,8.11e-09,18;CL:0002419,8.11e-09,18;CL:0000790,8.11e-09,18;CL:0000766,2.03e-08,72;CL:0000860,2.32e-08,42;CL:0002057,2.32e-08,42;CL:0000094,7.51e-08,8;CL:0000473,3.56e-07,48;CL:0000234,3.56e-07,48;CL:0000838,8.25e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;8.10e-09;18!UBERON:0005754;8.00e-08;1!UBERON:0010115;1.74e-07;1!CL:0002057;3.11e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.69e-09!112;UBERON:0002390!7.42e-09!102;UBERON:0003061!7.42e-09!102;UBERON:0007023!2.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;8.00e-08;1!UBERON:0006868;8.00e-08;1!UBERON:0002363;1.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.84e-08,1;UBERON:0006868,8.84e-08,1;UBERON:0002363,3.17e-07,1;UBERON:0007645,3.17e-07,1;UBERON:0007647,3.17e-07,1;UBERON:0010115,3.17e-07,1 | |||
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| |||
|short_description=p@chr15:68358280..68358284,+ | |||
}} |
Revision as of 07:59, 11 September 2013
Short description: | p@chr15:68358280..68358284, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:68358280..68358284, + |
Coexpression cluster: | C2344_Neutrophils_CD8_CD4_CD14_Natural_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.08e-20 | 3 |
single nucleate cell | 1.21e-19 | 3 |
mononuclear cell | 1.21e-19 | 3 |
leukocyte | 5.10e-18 | 136 |
intermediate monocyte | 1.59e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.59e-17 | 9 |
nongranular leukocyte | 8.28e-16 | 115 |
hematopoietic stem cell | 2.68e-15 | 168 |
hematopoietic cell | 2.73e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.35e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-11 | 161 |
CD4-positive, alpha-beta T cell | 3.71e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 3.84e-10 | 120 |
natural killer cell | 9.14e-10 | 3 |
pro-NK cell | 9.14e-10 | 3 |
mature alpha-beta T cell | 8.11e-09 | 18 |
alpha-beta T cell | 8.11e-09 | 18 |
immature T cell | 8.11e-09 | 18 |
mature T cell | 8.11e-09 | 18 |
immature alpha-beta T cell | 8.11e-09 | 18 |
myeloid leukocyte | 2.03e-08 | 72 |
classical monocyte | 2.32e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-08 | 42 |
granulocyte | 7.51e-08 | 8 |
defensive cell | 3.56e-07 | 48 |
phagocyte | 3.56e-07 | 48 |
lymphoid lineage restricted progenitor cell | 8.25e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 8.84e-08 | 1 |
seminal fluid secreting gland | 8.84e-08 | 1 |
dura mater | 3.17e-07 | 1 |
future meninx | 3.17e-07 | 1 |
ectomeninx | 3.17e-07 | 1 |
future dura mater | 3.17e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.