FFCP PHASE1:Hg19::chr15:65281775..65281821,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51324|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20373|TSSclassifier=S|UniProt=Q9NZD8|association_with_transcript=0bp_to_ENST00000433215,NM_001127889,uc002aod.2_5end|coexpression_cluster_id=C3462|description=CAGE_peak_3_at_SPG21_5end|id=chr15:65281775..65281821,-|ontology_enrichment_celltype=CL:0002194!3.29e-19!63;CL:0000576!3.29e-19!63;CL:0000040!3.29e-19!63;CL:0000559!3.29e-19!63;CL:0002009!6.66e-19!65;CL:0002057!7.87e-19!42;CL:0000766!6.00e-17!76;CL:0000860!3.02e-16!45;CL:0000557!4.48e-15!71;CL:0000839!1.55e-14!70;CL:0000219!1.29e-09!390;CL:0000763!2.21e-09!112;CL:0000049!2.21e-09!112;CL:0000048!2.92e-09!430;CL:0000723!1.41e-08!436;CL:0000034!2.59e-08!444;CL:0002320!1.28e-07!365;CL:0000134!8.87e-07!358|ontology_enrichment_celltype_v019=CL:0000473;3.34e-26;39!CL:0000234;3.34e-26;39!CL:0000860;6.41e-26;33!CL:0002057;6.41e-26;33!CL:0000576;1.69e-15;48!CL:0000766;1.35e-10;69!CL:0000235;5.84e-07;6|ontology_enrichment_celltype_v019_2=CL:0000473,3.01e-28,48;CL:0000234,3.01e-28,48;CL:0002194,3.80e-27,59;CL:0000576,3.80e-27,59;CL:0000040,3.80e-27,59;CL:0000559,3.80e-27,59;CL:0002009,1.11e-26,61;CL:0000766,1.67e-24,72;CL:0000860,5.13e-23,42;CL:0002057,5.13e-23,42;CL:0000557,2.13e-22,67;CL:0000839,4.71e-22,66;CL:0000763,4.46e-14,108;CL:0000049,4.46e-14,108;CL:0000219,2.58e-11,386;CL:0000048,1.45e-10,427;CL:0000723,2.46e-10,433;CL:0002320,1.16e-09,361;CL:0000034,1.32e-09,441;CL:0000134,1.20e-08,354;CL:0000235,6.79e-07,6|ontology_enrichment_development_v019=CL:0002057;7.71e-18;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.34e-15!86;UBERON:0004765!8.85e-15!101;UBERON:0001434!8.85e-15!101;UBERON:0002371!1.59e-14!80;UBERON:0002204!2.67e-14!167;UBERON:0002405!5.60e-12!115;UBERON:0002193!1.49e-10!112;UBERON:0002390!5.80e-09!102;UBERON:0003061!5.80e-09!102;UBERON:0002384!3.75e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.79e-24,82;UBERON:0001434,1.30e-22,100;UBERON:0004765,3.57e-22,90;UBERON:0002371,8.60e-22,76;UBERON:0002405,2.50e-20,93;UBERON:0002204,3.56e-17,167;UBERON:0002193,1.20e-15,108;UBERON:0002390,1.45e-13,98;UBERON:0003061,1.45e-13,98;UBERON:0000926,2.24e-13,315;UBERON:0004120,2.24e-13,315;UBERON:0006603,2.24e-13,315;UBERON:0003081,4.51e-10,203;UBERON:0002384,4.65e-09,371|phase1_expression=1.45342703416445,1.49870366723688,1.55049844505568,0,4.02264984984559,0,0,1.89515962028049,3.65659879479774,0.245733936501509,0,0,0.527533956456907,1.8564952944007,0.331397375727916,3.36162573225888,1.80808358407193,0.730310090387373,0.975865597581014,0.861847406537515,0,1.25381888591235,1.43117993565528,0.821246550437305,0.376627918784408,0.229240217243854,0.0821005894499457,0.314843125254717,1.18009283054671,1.15148819429164,1.54816123316076,0,0,0.369754010166788,0.309868802321207,0.142169232487422,1.76160263600908,1.10799081706375,0.601633342410425,1.51907609501096,3.35873211359887,3.56283032620878,2.31818010870768,4.36194716338694,9.82477453590904,4.12392904019288,11.3890228083785,13.5685403047203,17.6532631410209,9.78154133895312,8.96562472851852,7.09446689665756,14.479318590938,20.6555098746824,20.3139729891513,6.96496656307637,15.0098382531815,11.0114507378091,5.81559395504715,12.8371610830437,8.31138263538754,3.62836430205388,5.38551875578406,4.26224750532694,10.1573233520004,12.4824749432051,9.34233373493363,16.3311632416883,19.2948679815475,16.723541042294,8.47559303686716,18.0456041633907,10.7597211729901,0.845021145247767,1.27562579979026,1.67726916406701,1.34794357375794,1.05123824989054,1.12507910687956,0.285012743741249,0.39783335439818,0.91332076882317,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,1.70763890732835,0,0,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0.895037932904712,0,2.00535164254356,1.15877215168659,1.5905718941022,1.45990461090791,1.13441780596881,0.443458794925128,0.43917392846563,1.96468613246569,0,0.370784442784429,4.54366351116557,5.04976238167875,6.64789802594326,0,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,0,1.69592382577203,0,1.37559020970034,1.04497483268405,4.39308490587859,4.62496141492723,2.00832367658802,2.41697590265488,3.04108842287405,2.92874469057803,1.10298924103761,0.81014194788176,0.803697554556718,0.22452937262617,0.337834441449967,1.53316637465883,0.949265659568129,1.28241220751285,2.63560834872127,7.75560528296651,0.872188104285069,0.496971951695318,1.2663051166458,1.05927344650575,0.860509862246441,0,0,1.06748995729705,0.24666754841716,2.48968828319813,0.538842688278752,0.490385709340376,1.36221684880438,0,1.64025002283658,2.49728061464256,3.99330275081114,1.94283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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20373 | |||
|TSSclassifier=S | |||
|UniProt=Q9NZD8 | |||
|association_with_transcript=0bp_to_ENST00000433215,NM_001127889,uc002aod.2_5end | |||
|coexpression_cluster_id=C3462 | |||
|description=CAGE_peak_3_at_SPG21_5end | |||
|id=chr15:65281775..65281821,- | |||
|ontology_enrichment_celltype=CL:0002194!3.29e-19!63;CL:0000576!3.29e-19!63;CL:0000040!3.29e-19!63;CL:0000559!3.29e-19!63;CL:0002009!6.66e-19!65;CL:0002057!7.87e-19!42;CL:0000766!6.00e-17!76;CL:0000860!3.02e-16!45;CL:0000557!4.48e-15!71;CL:0000839!1.55e-14!70;CL:0000219!1.29e-09!390;CL:0000763!2.21e-09!112;CL:0000049!2.21e-09!112;CL:0000048!2.92e-09!430;CL:0000723!1.41e-08!436;CL:0000034!2.59e-08!444;CL:0002320!1.28e-07!365;CL:0000134!8.87e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.34e-26;39!CL:0000234;3.34e-26;39!CL:0000860;6.41e-26;33!CL:0002057;6.41e-26;33!CL:0000576;1.69e-15;48!CL:0000766;1.35e-10;69!CL:0000235;5.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.01e-28,48;CL:0000234,3.01e-28,48;CL:0002194,3.80e-27,59;CL:0000576,3.80e-27,59;CL:0000040,3.80e-27,59;CL:0000559,3.80e-27,59;CL:0002009,1.11e-26,61;CL:0000766,1.67e-24,72;CL:0000860,5.13e-23,42;CL:0002057,5.13e-23,42;CL:0000557,2.13e-22,67;CL:0000839,4.71e-22,66;CL:0000763,4.46e-14,108;CL:0000049,4.46e-14,108;CL:0000219,2.58e-11,386;CL:0000048,1.45e-10,427;CL:0000723,2.46e-10,433;CL:0002320,1.16e-09,361;CL:0000034,1.32e-09,441;CL:0000134,1.20e-08,354;CL:0000235,6.79e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.71e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.34e-15!86;UBERON:0004765!8.85e-15!101;UBERON:0001434!8.85e-15!101;UBERON:0002371!1.59e-14!80;UBERON:0002204!2.67e-14!167;UBERON:0002405!5.60e-12!115;UBERON:0002193!1.49e-10!112;UBERON:0002390!5.80e-09!102;UBERON:0003061!5.80e-09!102;UBERON:0002384!3.75e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.79e-24,82;UBERON:0001434,1.30e-22,100;UBERON:0004765,3.57e-22,90;UBERON:0002371,8.60e-22,76;UBERON:0002405,2.50e-20,93;UBERON:0002204,3.56e-17,167;UBERON:0002193,1.20e-15,108;UBERON:0002390,1.45e-13,98;UBERON:0003061,1.45e-13,98;UBERON:0000926,2.24e-13,315;UBERON:0004120,2.24e-13,315;UBERON:0006603,2.24e-13,315;UBERON:0003081,4.51e-10,203;UBERON:0002384,4.65e-09,371 | |||
|phase1_expression=1.45342703416445,1.49870366723688,1.55049844505568,0,4.02264984984559,0,0,1.89515962028049,3.65659879479774,0.245733936501509,0,0,0.527533956456907,1.8564952944007,0.331397375727916,3.36162573225888,1.80808358407193,0.730310090387373,0.975865597581014,0.861847406537515,0,1.25381888591235,1.43117993565528,0.821246550437305,0.376627918784408,0.229240217243854,0.0821005894499457,0.314843125254717,1.18009283054671,1.15148819429164,1.54816123316076,0,0,0.369754010166788,0.309868802321207,0.142169232487422,1.76160263600908,1.10799081706375,0.601633342410425,1.51907609501096,3.35873211359887,3.56283032620878,2.31818010870768,4.36194716338694,9.82477453590904,4.12392904019288,11.3890228083785,13.5685403047203,17.6532631410209,9.78154133895312,8.96562472851852,7.09446689665756,14.479318590938,20.6555098746824,20.3139729891513,6.96496656307637,15.0098382531815,11.0114507378091,5.81559395504715,12.8371610830437,8.31138263538754,3.62836430205388,5.38551875578406,4.26224750532694,10.1573233520004,12.4824749432051,9.34233373493363,16.3311632416883,19.2948679815475,16.723541042294,8.47559303686716,18.0456041633907,10.7597211729901,0.845021145247767,1.27562579979026,1.67726916406701,1.34794357375794,1.05123824989054,1.12507910687956,0.285012743741249,0.39783335439818,0.91332076882317,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,1.32208974556972,0,1.70763890732835,0,0,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0.895037932904712,0,2.00535164254356,1.15877215168659,1.5905718941022,1.45990461090791,1.13441780596881,0.443458794925128,0.43917392846563,1.96468613246569,0,0.370784442784429,4.54366351116557,5.04976238167875,6.64789802594326,0,0.571994910780128,0.371457501329565,0.79504962946682,0.860234595106124,0,1.69592382577203,0,1.37559020970034,1.04497483268405,4.39308490587859,4.62496141492723,2.00832367658802,2.41697590265488,3.04108842287405,2.92874469057803,1.10298924103761,0.81014194788176,0.803697554556718,0.22452937262617,0.337834441449967,1.53316637465883,0.949265659568129,1.28241220751285,2.63560834872127,7.75560528296651,0.872188104285069,0.496971951695318,1.2663051166458,1.05927344650575,0.860509862246441,0,0,1.06748995729705,0.24666754841716,2.48968828319813,0.538842688278752,0.490385709340376,1.36221684880438,0,1.64025002283658,2.49728061464256,3.99330275081114,1.94283284717341,0.352303495931295,0.323745888736263,0.702254033511242,1.63323337003915,1.59684612505298,2.58314452939414,1.18800285728205,1.7308685049499,0,0.718618141816238,2.18836948140286,0.375355559615893,1.6623846929051,0,0.612975591598039,1.95309476578576,0.453728732640084,0,0.85422955527427,0.423863802319124,0.900273288253207,0.412210116953756,0.257640540045629,0.744467425326359,0.506328996723799,0.68205903612839,0.757301322732344,1.01254888506529,2.58633690910099,0.355009592516614,0.705264687593482,0.508681776931463,0.193260853163297,0.545492241181669,0,0.731842236777572,0.397589304964456,0.929551542956147,0.518305275076852,0.504641701751257,0,1.56449532329816,1.92972281457866,2.76269842704961,1.39310378409594,2.88751792667834,0,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0.539325232640658,0.588664395376038,0.769494313892781,1.4763109092493,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0.245976877086227,0.343135620597051,0,1.1240175325762,0,0,7.16778271682714,1.03993478527958,0,1.27523445472584,0.234817388471643,3.46479474626577,3.24089858803628,2.28304982681518,1.58040879591855,0.858486162094873,8.12516120088411,6.08411089362018,6.39113997841531,0,0.335964256397719,0,0.179117045405697,0,0.383382679165211,0,0,0.414656231081544,0.432359860250884,0,2.73040945456327,3.05590740446622,1.17217447210047,3.4214489204541,2.67351481028641,6.9078903304101,2.85826432630578,0.560655421726804,0.43596006883328,0.5867062865676,1.16344544182,0,0.845302752556,8.24408161413099,4.16029747645464,0.771622122786426,0,0.266422179016099,1.71573592389777,2.17048642156577,0,1.62868092146868,0.355391948742546,0,1.20575750823834,0,0.399891964728228,23.1085183218262,19.5880265658529,12.6500363689819,0.958499421966331,3.44585807502342,1.42636905040718,0.868687840005475,1.84928690295345,2.86497541183833,0,0.788123040807709,0.862510299438069,0.641715181398742,1.77866236955724,6.50699269288109,0.773288812777695,1.00509759200609,2.55175500661265,0.749007023947182,0,1.65766205374414,3.0672872929785,0.500170521059677,1.08506009479894,2.28767947683888,0.713715955188647,1.10391690523754,0.117141414992713,3.00946099727719,9.09630016223939,2.0694614258501,2.65690239414175,0.553107505625109,2.08520674723399,3.72022199179207,5.14715135716284,0,0,0.533637789017222,3.33440328590885,0,0.604780586659361,1.48864684691266,0.767309866440312,0.280660094433074,2.17836553734692,0,0.482561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| |||
|short_description=p3@SPG21 | |||
}} |
Revision as of 07:52, 11 September 2013
Short description: | p3@SPG21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPG21_5end |
Coexpression cluster: | C3462_Monocytederived_CD14_Macrophage_extraskeletal_schwannoma_Dendritic_Osteoblast |
Association with transcript: | 0bp_to_ENST00000433215, NM_001127889, uc002aod.2_5end |
EntrezGene: | SPG21 |
HGNC: | 20373 |
UniProt: | Q9NZD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.01e-28 | 48 |
phagocyte | 3.01e-28 | 48 |
monopoietic cell | 3.80e-27 | 59 |
monocyte | 3.80e-27 | 59 |
monoblast | 3.80e-27 | 59 |
promonocyte | 3.80e-27 | 59 |
macrophage dendritic cell progenitor | 1.11e-26 | 61 |
myeloid leukocyte | 1.67e-24 | 72 |
classical monocyte | 5.13e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.13e-23 | 42 |
granulocyte monocyte progenitor cell | 2.13e-22 | 67 |
myeloid lineage restricted progenitor cell | 4.71e-22 | 66 |
myeloid cell | 4.46e-14 | 108 |
common myeloid progenitor | 4.46e-14 | 108 |
motile cell | 2.58e-11 | 386 |
multi fate stem cell | 1.45e-10 | 427 |
somatic stem cell | 2.46e-10 | 433 |
connective tissue cell | 1.16e-09 | 361 |
stem cell | 1.32e-09 | 441 |
mesenchymal cell | 1.20e-08 | 354 |
macrophage | 6.79e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.79e-24 | 82 |
skeletal system | 1.30e-22 | 100 |
skeletal element | 3.57e-22 | 90 |
bone marrow | 8.60e-22 | 76 |
immune system | 2.50e-20 | 93 |
musculoskeletal system | 3.56e-17 | 167 |
hemolymphoid system | 1.20e-15 | 108 |
hematopoietic system | 1.45e-13 | 98 |
blood island | 1.45e-13 | 98 |
mesoderm | 2.24e-13 | 315 |
mesoderm-derived structure | 2.24e-13 | 315 |
presumptive mesoderm | 2.24e-13 | 315 |
lateral plate mesoderm | 4.51e-10 | 203 |
connective tissue | 4.65e-09 | 371 |
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