FFCP PHASE1:Hg19::chr15:39888716..39888727,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C453|description=CAGE_peak_at_chr15:39888716..39888727,+|id=chr15:39888716..39888727,+|ontology_enrichment_celltype=CL:0000057!1.81e-12!75;CL:0000055!5.66e-12!180;CL:0000222!7.50e-11!119;CL:0002139!1.68e-10!24;CL:0002371!1.89e-10!591;CL:0000115!1.02e-09!35;CL:0000548!3.70e-08!679;CL:0000004!3.70e-08!679;CL:0000255!3.70e-08!679;CL:0000144!4.03e-08!625;CL:0002078!5.26e-08!44;CL:0000220!5.61e-08!246;CL:0000012!8.63e-08!682;CL:0002321!1.11e-07!248;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18|ontology_enrichment_celltype_v019=CL:0002139;5.31e-16;24!CL:0000115;5.39e-13;36!CL:0000071;1.78e-12;18!CL:0002544;2.95e-08;6!CL:0002078;3.01e-08;45!CL:0000244;8.34e-08;4!CL:0000731;8.34e-08;4!CL:0002543;9.85e-08;6!CL:1000413;3.17e-07;9|ontology_enrichment_celltype_v019_2=CL:0002139,5.49e-16,24;CL:0000115,3.14e-15,36;CL:0002078,1.64e-12,45;CL:0000071,1.85e-12,18;CL:0002546,1.85e-12,18;CL:0000057,4.70e-09,76;CL:0002544,2.23e-08,6;CL:0000244,5.59e-08,4;CL:0000731,5.59e-08,4;CL:0000222,1.01e-07,121;CL:0002543,1.57e-07,6;CL:0000213,1.97e-07,58;CL:0000215,1.97e-07,58;CL:1000413,2.48e-07,9;CL:0002580,9.97e-07,3|ontology_enrichment_development_v019=CL:0002546;1.78e-12;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!3.56e-13!69;UBERON:0002049!8.90e-13!79;UBERON:0007798!8.90e-13!79;UBERON:0001981!1.22e-11!60;UBERON:0007500!1.22e-11!60;UBERON:0004537!1.22e-11!60;UBERON:0006965!1.22e-11!60;UBERON:0003914!1.90e-11!118;UBERON:0004872!6.09e-11!84;UBERON:0004535!1.88e-10!110;UBERON:0000467!2.19e-10!625;UBERON:0000480!2.99e-10!626;UBERON:0000468!4.61e-10!659;UBERON:0001009!1.24e-09!113;UBERON:0000490!4.17e-09!138;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0002100!4.53e-07!216|ontology_enrichment_uberon_v019=UBERON:0004638;1.78e-12;18!UBERON:0001986;1.78e-12;18!UBERON:0004852;1.78e-12;18!UBERON:0000305;1.09e-09;7!UBERON:0000487;1.18e-09;22!UBERON:0005631;9.13e-09;10!UBERON:0000158;9.13e-09;10!UBERON:0006914;3.82e-08;25!UBERON:0003915;3.17e-07;9!UBERON:0004700;3.17e-07;9!UBERON:0001917;3.17e-07;9!UBERON:0000490;8.59e-07;33!UBERON:0000055;9.46e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.85e-12,18;UBERON:0001986,1.85e-12,18;UBERON:0004852,1.85e-12,18;UBERON:0000055,9.47e-11,68;UBERON:0000487,1.21e-09,22;UBERON:0000305,1.41e-09,7;UBERON:0002049,2.45e-09,78;UBERON:0007798,2.45e-09,78;UBERON:0007500,7.15e-09,59;UBERON:0001981,7.15e-09,59;UBERON:0004537,7.15e-09,59;UBERON:0006965,7.15e-09,59;UBERON:0004871,2.91e-08,8;UBERON:0006914,3.90e-08,25;UBERON:0005631,2.27e-07,14;UBERON:0000158,2.27e-07,14;UBERON:0003915,2.48e-07,9;UBERON:0004700,2.48e-07,9;UBERON:0001917,2.48e-07,9;UBERON:0003914,5.72e-07,117|phase1_expression=1.2717486548939,1.49870366723688,0.986680828671798,4.00293193412522,0.446961094427288,1.74467704820074,0,0,0,0.982935746006035,0.697801167972428,2.62129646556207,2.63766978228454,0.123766352960047,0.331397375727916,2.01697543935533,0,0.730310090387373,3.41552959153355,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0.383829398097213,0.464448369948228,1.83884244895785,0.6024118375565,0,0,0,0,0.553995408531877,1.60435557976113,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,2.32429036905685,0,0,2.8769239232215,0.256160706529101,0.236482229888585,1.72372840368309,0,0,1.12945403725563,0,0,2.14258724659632,2.56743221660875,0.639337125799041,1.31940520074686,0,0,2.32167390902867,0,0,0.502497330513487,0.521482918420201,0,0,1.84138817993782,0,0,0,0,0.336985893439485,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,2.18638648103376,0,4.51282652089873,3.95715559346807,0.838998872419812,0,1.46296476575767,2.06733407335463,0.71153252537342,3.68192674041137,0,1.52054421143703,0.732186172644509,3.67663080345869,1.62028389576352,2.05389375053383,1.12264686313085,2.70267553159973,4.5994991239765,0,1.28241220751285,0,0,0.872188104285069,7.45457927542978,0.379891534993739,0.264818361626438,0.573673241497627,0.354668382198357,0.560677600142307,2.1349799145941,1.2333377420858,0,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,1.22492502752936,0.122834317311768,0.516628905878827,5.94001428641027,4.45080472701402,0,0,0,0,0.277064115484183,1.75591048352335,5.82326812018137,7.51190294532984,0.680593098960126,2.69084453533293,0.640672166455702,0.847727604638247,0.600182192168805,1.75189299705346,1.03056216018252,0.744467425326359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,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0.502055437748735,0,0.162806537221949,0.106727345877715,0,0.0898252021065869,0,0.244482888365733,0,0,0.201273793591026,0|short_description=p@chr15:39888716..39888727,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39888716..39888727,+ | |||
|id=chr15:39888716..39888727,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.81e-12!75;CL:0000055!5.66e-12!180;CL:0000222!7.50e-11!119;CL:0002139!1.68e-10!24;CL:0002371!1.89e-10!591;CL:0000115!1.02e-09!35;CL:0000548!3.70e-08!679;CL:0000004!3.70e-08!679;CL:0000255!3.70e-08!679;CL:0000144!4.03e-08!625;CL:0002078!5.26e-08!44;CL:0000220!5.61e-08!246;CL:0000012!8.63e-08!682;CL:0002321!1.11e-07!248;CL:0000071!3.82e-07!18;CL:0002546!3.82e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.31e-16;24!CL:0000115;5.39e-13;36!CL:0000071;1.78e-12;18!CL:0002544;2.95e-08;6!CL:0002078;3.01e-08;45!CL:0000244;8.34e-08;4!CL:0000731;8.34e-08;4!CL:0002543;9.85e-08;6!CL:1000413;3.17e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.49e-16,24;CL:0000115,3.14e-15,36;CL:0002078,1.64e-12,45;CL:0000071,1.85e-12,18;CL:0002546,1.85e-12,18;CL:0000057,4.70e-09,76;CL:0002544,2.23e-08,6;CL:0000244,5.59e-08,4;CL:0000731,5.59e-08,4;CL:0000222,1.01e-07,121;CL:0002543,1.57e-07,6;CL:0000213,1.97e-07,58;CL:0000215,1.97e-07,58;CL:1000413,2.48e-07,9;CL:0002580,9.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.78e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.56e-13!69;UBERON:0002049!8.90e-13!79;UBERON:0007798!8.90e-13!79;UBERON:0001981!1.22e-11!60;UBERON:0007500!1.22e-11!60;UBERON:0004537!1.22e-11!60;UBERON:0006965!1.22e-11!60;UBERON:0003914!1.90e-11!118;UBERON:0004872!6.09e-11!84;UBERON:0004535!1.88e-10!110;UBERON:0000467!2.19e-10!625;UBERON:0000480!2.99e-10!626;UBERON:0000468!4.61e-10!659;UBERON:0001009!1.24e-09!113;UBERON:0000490!4.17e-09!138;UBERON:0001637!1.14e-07!42;UBERON:0003509!1.14e-07!42;UBERON:0004572!1.14e-07!42;UBERON:0001986!3.82e-07!18;UBERON:0004638!3.82e-07!18;UBERON:0004852!3.82e-07!18;UBERON:0002100!4.53e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.78e-12;18!UBERON:0001986;1.78e-12;18!UBERON:0004852;1.78e-12;18!UBERON:0000305;1.09e-09;7!UBERON:0000487;1.18e-09;22!UBERON:0005631;9.13e-09;10!UBERON:0000158;9.13e-09;10!UBERON:0006914;3.82e-08;25!UBERON:0003915;3.17e-07;9!UBERON:0004700;3.17e-07;9!UBERON:0001917;3.17e-07;9!UBERON:0000490;8.59e-07;33!UBERON:0000055;9.46e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.85e-12,18;UBERON:0001986,1.85e-12,18;UBERON:0004852,1.85e-12,18;UBERON:0000055,9.47e-11,68;UBERON:0000487,1.21e-09,22;UBERON:0000305,1.41e-09,7;UBERON:0002049,2.45e-09,78;UBERON:0007798,2.45e-09,78;UBERON:0007500,7.15e-09,59;UBERON:0001981,7.15e-09,59;UBERON:0004537,7.15e-09,59;UBERON:0006965,7.15e-09,59;UBERON:0004871,2.91e-08,8;UBERON:0006914,3.90e-08,25;UBERON:0005631,2.27e-07,14;UBERON:0000158,2.27e-07,14;UBERON:0003915,2.48e-07,9;UBERON:0004700,2.48e-07,9;UBERON:0001917,2.48e-07,9;UBERON:0003914,5.72e-07,117 | |||
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| |||
|short_description=p@chr15:39888716..39888727,+ | |||
}} |
Revision as of 06:52, 11 September 2013
Short description: | p@chr15:39888716..39888727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39888716..39888727, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.49e-16 | 24 |
endothelial cell | 3.14e-15 | 36 |
meso-epithelial cell | 1.64e-12 | 45 |
blood vessel endothelial cell | 1.85e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.85e-12 | 18 |
fibroblast | 4.70e-09 | 76 |
aortic endothelial cell | 2.23e-08 | 6 |
transitional epithelial cell | 5.59e-08 | 4 |
urothelial cell | 5.59e-08 | 4 |
mesodermal cell | 1.01e-07 | 121 |
vein endothelial cell | 1.57e-07 | 6 |
lining cell | 1.97e-07 | 58 |
barrier cell | 1.97e-07 | 58 |
endothelial cell of artery | 2.48e-07 | 9 |
preadipocyte of the breast | 9.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.85e-12 | 18 |
endothelium | 1.85e-12 | 18 |
cardiovascular system endothelium | 1.85e-12 | 18 |
vessel | 9.47e-11 | 68 |
simple squamous epithelium | 1.21e-09 | 22 |
amnion | 1.41e-09 | 7 |
vasculature | 2.45e-09 | 78 |
vascular system | 2.45e-09 | 78 |
epithelial tube open at both ends | 7.15e-09 | 59 |
blood vessel | 7.15e-09 | 59 |
blood vasculature | 7.15e-09 | 59 |
vascular cord | 7.15e-09 | 59 |
somatic layer of lateral plate mesoderm | 2.91e-08 | 8 |
squamous epithelium | 3.90e-08 | 25 |
extraembryonic membrane | 2.27e-07 | 14 |
membranous layer | 2.27e-07 | 14 |
endothelial tube | 2.48e-07 | 9 |
arterial system endothelium | 2.48e-07 | 9 |
endothelium of artery | 2.48e-07 | 9 |
epithelial tube | 5.72e-07 | 117 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.