FFCP PHASE1:Hg19::chr15:34630146..34630232,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000558667,ENST00000559236,ENST00000561080,ENST00000561120_5end | |||
|description=CAGE_peak_2_at_SLC12A6_5end | |||
|id=chr15:34630146..34630232,- | |||
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|ontology_enrichment_celltype_v019=CL:0000860;1.19e-17;33!CL:0002057;1.19e-17;33!CL:0000473;1.11e-14;39!CL:0000234;1.11e-14;39!CL:0000576;2.46e-10;48!CL:0000766;3.02e-08;69!CL:0000791;6.81e-08;18!CL:0000789;6.81e-08;18!CL:0002419;6.81e-08;18!CL:0002087;2.85e-07;104 | |||
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|ontology_enrichment_development_v019=CL:0002057;5.62e-13;42!CL:0000790;6.81e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@SLC12A6 | |||
}} |
Revision as of 06:40, 11 September 2013
Short description: | p2@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC12A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000558667, ENST00000559236, ENST00000561080, ENST00000561120_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.15e-21 | 114 |
hemolymphoid system | 4.41e-17 | 108 |
hematopoietic system | 7.06e-17 | 98 |
blood island | 7.06e-17 | 98 |
neural tube | 3.31e-15 | 56 |
neural rod | 3.31e-15 | 56 |
future spinal cord | 3.31e-15 | 56 |
neural keel | 3.31e-15 | 56 |
regional part of nervous system | 2.20e-14 | 53 |
regional part of brain | 2.20e-14 | 53 |
immune system | 4.26e-14 | 93 |
regional part of forebrain | 6.62e-13 | 41 |
forebrain | 6.62e-13 | 41 |
anterior neural tube | 6.62e-13 | 41 |
future forebrain | 6.62e-13 | 41 |
bone marrow | 1.31e-12 | 76 |
lateral plate mesoderm | 1.66e-12 | 203 |
brain | 6.07e-12 | 68 |
future brain | 6.07e-12 | 68 |
telencephalon | 2.97e-11 | 34 |
brain grey matter | 6.26e-11 | 34 |
gray matter | 6.26e-11 | 34 |
bone element | 9.37e-11 | 82 |
cerebral hemisphere | 1.99e-10 | 32 |
regional part of telencephalon | 2.84e-10 | 32 |
central nervous system | 3.53e-10 | 81 |
skeletal element | 1.14e-09 | 90 |
skeletal system | 1.33e-09 | 100 |
regional part of cerebral cortex | 5.42e-09 | 22 |
neocortex | 1.09e-08 | 20 |
nervous system | 1.18e-08 | 89 |
cerebral cortex | 4.73e-08 | 25 |
pallium | 4.73e-08 | 25 |
neural plate | 4.93e-08 | 82 |
presumptive neural plate | 4.93e-08 | 82 |
neurectoderm | 1.42e-07 | 86 |
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