FFCP PHASE1:Hg19::chr14:106332480..106332490,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C138|description=CAGE_peak_at_chr14:106332480..106332490,-|id=chr14:106332480..106332490,-|ontology_enrichment_celltype=CL:0000236!3.26e-61!14;CL:0000945!6.16e-35!24;CL:0000826!6.16e-35!24;CL:0000838!4.36e-15!52;CL:0000542!9.14e-15!53;CL:0000051!9.14e-15!53;CL:0000819!5.59e-09!1;CL:0000037!8.07e-09!172;CL:0000566!8.07e-09!172;CL:0001024!1.27e-08!1;CL:0000988!3.69e-08!182;CL:0002087!8.72e-08!119;CL:0002032!5.57e-07!165;CL:0000837!5.57e-07!165|ontology_enrichment_celltype_v019=CL:0000236;1.84e-60;13!CL:0000945;6.92e-33;24!CL:0000785;1.06e-23;1!CL:0000819;1.06e-23;1!CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0000542;1.34e-12;53|ontology_enrichment_celltype_v019_2=CL:0000236,3.62e-56,14;CL:0000945,6.92e-33,24;CL:0000826,6.92e-33,24;CL:0000819,1.07e-23,1;CL:0000838,2.97e-15,52;CL:0000542,5.75e-15,53;CL:0000051,5.75e-15,53;CL:0000785,1.48e-12,2;CL:0000955,1.48e-12,2;CL:0000818,1.48e-12,2;CL:0000954,1.48e-12,2;CL:0000816,1.48e-12,2;CL:0000817,8.31e-09,3;CL:0002087,8.19e-07,115|ontology_enrichment_development_v019=CL:0000051;1.34e-12;53!CL:0000954;1.48e-12;2|ontology_enrichment_disease=DOID:0060073!5.59e-09!1;DOID:8675!5.59e-09!1|ontology_enrichment_disease_v019=DOID:0060073;1.06e-23;1!DOID:8675;1.06e-23;1|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-23,1;DOID:8675,1.07e-23,1|ontology_enrichment_uberon=UBERON:0004177!9.85e-10!7;UBERON:0000029!2.13e-08!1;UBERON:0001154!2.64e-08!1;UBERON:0001153!2.64e-08!1;UBERON:0002372!3.53e-08!1;UBERON:0001961!3.53e-08!1;UBERON:0001744!3.53e-08!1;UBERON:0001735!3.53e-08!1;UBERON:0002370!7.72e-08!4;UBERON:0005058!7.72e-08!4;UBERON:0009113!7.72e-08!4;UBERON:0003295!7.72e-08!4;UBERON:0005562!7.72e-08!4;UBERON:0001042!9.75e-07!10;UBERON:0009145!9.75e-07!10|ontology_enrichment_uberon_v019=UBERON:0002106;8.96e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.96e-09,3;UBERON:0004854,8.96e-09,3;UBERON:0009034,8.96e-09,3;UBERON:0002095,8.96e-09,3;UBERON:0004782,8.96e-09,3;UBERON:0003281,8.96e-09,3;UBERON:0009664,8.96e-09,3;UBERON:0002296,8.96e-09,3;UBERON:0005602,8.96e-09,3;UBERON:0001179,8.96e-09,3;UBERON:0006293,8.96e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,1.28019066769952,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.042016088234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28735228665244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:106332480..106332490,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr14:106332480..106332490,- | |||
|id=chr14:106332480..106332490,- | |||
|ontology_enrichment_celltype=CL:0000236!3.26e-61!14;CL:0000945!6.16e-35!24;CL:0000826!6.16e-35!24;CL:0000838!4.36e-15!52;CL:0000542!9.14e-15!53;CL:0000051!9.14e-15!53;CL:0000819!5.59e-09!1;CL:0000037!8.07e-09!172;CL:0000566!8.07e-09!172;CL:0001024!1.27e-08!1;CL:0000988!3.69e-08!182;CL:0002087!8.72e-08!119;CL:0002032!5.57e-07!165;CL:0000837!5.57e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.84e-60;13!CL:0000945;6.92e-33;24!CL:0000785;1.06e-23;1!CL:0000819;1.06e-23;1!CL:0002032;3.28e-23;1!CL:0000557;3.28e-23;1!CL:0000542;1.34e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.62e-56,14;CL:0000945,6.92e-33,24;CL:0000826,6.92e-33,24;CL:0000819,1.07e-23,1;CL:0000838,2.97e-15,52;CL:0000542,5.75e-15,53;CL:0000051,5.75e-15,53;CL:0000785,1.48e-12,2;CL:0000955,1.48e-12,2;CL:0000818,1.48e-12,2;CL:0000954,1.48e-12,2;CL:0000816,1.48e-12,2;CL:0000817,8.31e-09,3;CL:0002087,8.19e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.34e-12;53!CL:0000954;1.48e-12;2 | |||
|ontology_enrichment_disease=DOID:0060073!5.59e-09!1;DOID:8675!5.59e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.06e-23;1!DOID:8675;1.06e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-23,1;DOID:8675,1.07e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.85e-10!7;UBERON:0000029!2.13e-08!1;UBERON:0001154!2.64e-08!1;UBERON:0001153!2.64e-08!1;UBERON:0002372!3.53e-08!1;UBERON:0001961!3.53e-08!1;UBERON:0001744!3.53e-08!1;UBERON:0001735!3.53e-08!1;UBERON:0002370!7.72e-08!4;UBERON:0005058!7.72e-08!4;UBERON:0009113!7.72e-08!4;UBERON:0003295!7.72e-08!4;UBERON:0005562!7.72e-08!4;UBERON:0001042!9.75e-07!10;UBERON:0009145!9.75e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.96e-09,3;UBERON:0004854,8.96e-09,3;UBERON:0009034,8.96e-09,3;UBERON:0002095,8.96e-09,3;UBERON:0004782,8.96e-09,3;UBERON:0003281,8.96e-09,3;UBERON:0009664,8.96e-09,3;UBERON:0002296,8.96e-09,3;UBERON:0005602,8.96e-09,3;UBERON:0001179,8.96e-09,3;UBERON:0006293,8.96e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,1.28019066769952,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,1.70763890732835,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.042016088234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28735228665244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:106332480..106332490,- | |||
}} |
Revision as of 03:36, 11 September 2013
Short description: | p@chr14:106332480..106332490, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:106332480..106332490, - |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.62e-56 | 14 |
lymphocyte of B lineage | 6.92e-33 | 24 |
pro-B cell | 6.92e-33 | 24 |
B-1 B cell | 1.07e-23 | 1 |
lymphoid lineage restricted progenitor cell | 2.97e-15 | 52 |
lymphocyte | 5.75e-15 | 53 |
common lymphoid progenitor | 5.75e-15 | 53 |
mature B cell | 1.48e-12 | 2 |
pre-B-II cell | 1.48e-12 | 2 |
transitional stage B cell | 1.48e-12 | 2 |
small pre-B-II cell | 1.48e-12 | 2 |
immature B cell | 1.48e-12 | 2 |
precursor B cell | 8.31e-09 | 3 |
nongranular leukocyte | 8.19e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.96e-09 | 3 |
gastrointestinal system mesentery | 8.96e-09 | 3 |
stomach region | 8.96e-09 | 3 |
mesentery | 8.96e-09 | 3 |
gastrointestinal system serosa | 8.96e-09 | 3 |
mesentery of stomach | 8.96e-09 | 3 |
gut mesentery | 8.96e-09 | 3 |
dorsal mesentery | 8.96e-09 | 3 |
dorsal mesogastrium | 8.96e-09 | 3 |
peritoneal cavity | 8.96e-09 | 3 |
spleen primordium | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.07e-23 | 1 |
lymphosarcoma | 1.07e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.