FFCP PHASE1:Hg19::chr14:106331697..106331717,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=5532|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000390565_5end|coexpression_cluster_id=C904|description=CAGE_peak_2_at_IGHJ1_5end|id=chr14:106331697..106331717,-|ontology_enrichment_celltype=CL:0000784!1.28e-16!3;CL:0000236!1.68e-12!14;CL:0000842!2.27e-07!3;CL:0000945!4.81e-07!24;CL:0000826!4.81e-07!24;CL:0001024!9.30e-07!1|ontology_enrichment_celltype_v019=CL:0000784;7.99e-34;3!CL:0000037;1.05e-12;1!CL:0001024;1.05e-12;1!CL:0002032;2.75e-12;1!CL:0000557;2.75e-12;1!CL:0000451;1.11e-09;10|ontology_enrichment_celltype_v019_2=CL:0000784,8.46e-34,3;CL:0001024,1.11e-12,1;CL:0000451,1.12e-09,10;CL:0000037,1.01e-07,168;CL:0000988,3.05e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;5.87e-09;31|ontology_enrichment_disease_v019_2=DOID:8692,5.96e-09,31;DOID:1240,4.36e-07,39|ontology_enrichment_uberon=UBERON:0004177!9.55e-12!7;UBERON:0002106!8.63e-08!3;UBERON:0004854!8.63e-08!3;UBERON:0009034!8.63e-08!3;UBERON:0002095!8.63e-08!3;UBERON:0004782!8.63e-08!3;UBERON:0003281!8.63e-08!3;UBERON:0009664!8.63e-08!3;UBERON:0002296!8.63e-08!3;UBERON:0005602!8.63e-08!3;UBERON:0001179!8.63e-08!3;UBERON:0006293!8.63e-08!3|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.450417134059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,11.8954195721123,3.92355994087075,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,8.82415309929765,4.57595928624102,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.5293344007132,2.10655907145603,1.69338866179106,0,0,15.2917234952239,0,0,47.0631142288457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.469919589899268,2.19156819110162,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.434523000071005,0,0,0,0,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0,0,0.805095174364105,0|short_description=p2@IGHJ1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5532 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000390565_5end | |||
|coexpression_cluster_id=C904 | |||
|description=CAGE_peak_2_at_IGHJ1_5end | |||
|id=chr14:106331697..106331717,- | |||
|ontology_enrichment_celltype=CL:0000784!1.28e-16!3;CL:0000236!1.68e-12!14;CL:0000842!2.27e-07!3;CL:0000945!4.81e-07!24;CL:0000826!4.81e-07!24;CL:0001024!9.30e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.99e-34;3!CL:0000037;1.05e-12;1!CL:0001024;1.05e-12;1!CL:0002032;2.75e-12;1!CL:0000557;2.75e-12;1!CL:0000451;1.11e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,8.46e-34,3;CL:0001024,1.11e-12,1;CL:0000451,1.12e-09,10;CL:0000037,1.01e-07,168;CL:0000988,3.05e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;5.87e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.96e-09,31;DOID:1240,4.36e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.55e-12!7;UBERON:0002106!8.63e-08!3;UBERON:0004854!8.63e-08!3;UBERON:0009034!8.63e-08!3;UBERON:0002095!8.63e-08!3;UBERON:0004782!8.63e-08!3;UBERON:0003281!8.63e-08!3;UBERON:0009664!8.63e-08!3;UBERON:0002296!8.63e-08!3;UBERON:0005602!8.63e-08!3;UBERON:0001179!8.63e-08!3;UBERON:0006293!8.63e-08!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.450417134059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0.889509253863555,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0.382273228125229,11.8954195721123,3.92355994087075,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,8.82415309929765,4.57595928624102,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.5293344007132,2.10655907145603,1.69338866179106,0,0,15.2917234952239,0,0,47.0631142288457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.469919589899268,2.19156819110162,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.434523000071005,0,0,0,0,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p2@IGHJ1 | |||
}} |
Revision as of 03:36, 11 September 2013
Short description: | p2@IGHJ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IGHJ1_5end |
Coexpression cluster: | C904_acute_CD133_CD34_Dendritic_carcinoid_granulocyte_spleen |
Association with transcript: | -29bp_to_ENST00000390565_5end |
EntrezGene: | NA |
HGNC: | 5532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 8.46e-34 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.11e-12 | 1 |
dendritic cell | 1.12e-09 | 10 |
hematopoietic stem cell | 1.01e-07 | 168 |
hematopoietic cell | 3.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.96e-09 | 31 |
leukemia | 4.36e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.