FFCP PHASE1:Hg19::chr14:106329430..106329463,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=P01854,P01880|association_with_transcript=0bp_to_uc001yrw.1,uc001ysj.2,uc001ysk.1,uc001ysl.1_5end|coexpression_cluster_id=C359|description=CAGE_peak_1_at_uc001yrw.1_5end,CAGE_peak_1_at_uc001ysj.2_5end,CAGE_peak_1_at_uc001ysk.1_5end,CAGE_peak_1_at_uc001ysl.1_5end|id=chr14:106329430..106329463,-|ontology_enrichment_celltype=CL:0000945!2.98e-49!24;CL:0000826!2.98e-49!24;CL:0000236!1.90e-31!14;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000838!3.25e-19!52;CL:0002087!6.58e-08!119|ontology_enrichment_celltype_v019=CL:0000945;1.41e-65;24!CL:0000236;3.73e-50;13!CL:0000542;1.40e-18;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.30e-65,24;CL:0000826,1.30e-65,24;CL:0000236,7.33e-55,14;CL:0000838,7.57e-28,52;CL:0000542,3.09e-27,53;CL:0000051,3.09e-27,53;CL:0002087,4.56e-10,115;CL:0002031,1.77e-09,120;CL:0000738,6.88e-08,136;CL:0000817,5.12e-07,3|ontology_enrichment_development_v019=CL:0000051;1.40e-18;53!UBERON:0006965;4.13e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.68e-31!115;UBERON:0000178!1.62e-09!15;UBERON:0000179!1.62e-09!15;UBERON:0000463!1.62e-09!15;UBERON:0002106!2.17e-08!3;UBERON:0004854!2.17e-08!3;UBERON:0009034!2.17e-08!3;UBERON:0002095!2.17e-08!3;UBERON:0004782!2.17e-08!3;UBERON:0003281!2.17e-08!3;UBERON:0009664!2.17e-08!3;UBERON:0002296!2.17e-08!3;UBERON:0005602!2.17e-08!3;UBERON:0001179!2.17e-08!3;UBERON:0006293!2.17e-08!3|ontology_enrichment_uberon_v019=UBERON:0001829;2.60e-10;2!UBERON:0004921;1.18e-08;33!UBERON:0001044;1.42e-07;6!UBERON:0003293;1.42e-07;6!UBERON:0003294;1.42e-07;6!UBERON:0010047;1.42e-07;6!UBERON:0003408;1.42e-07;6!UBERON:0000167;1.42e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-17,114;UBERON:0001829,2.42e-10,2;UBERON:0001044,1.48e-07,6;UBERON:0003293,1.48e-07,6;UBERON:0003294,1.48e-07,6;UBERON:0010047,1.48e-07,6;UBERON:0000167,1.48e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.985207073399349,1.49550484495991,0,0,0,0,0,0,1.00707360754392,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.36910889009705,4.44754626931777,3.84057200309856,6.80673177961221,1.72425731986345,3.96626923670917,4.77026877267682,2.84606484554724,5.87237189370939,8.02773779062981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,2.05681136543097,0,0,2.37937552888281,0,0,0,0.557409525377156,1.58696134274089,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,3.31540698637377,0,0,0.615424027305347,0,0,0,0,1.1837208676432,2.3948309234694,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,5.92665682172372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.45483524732629,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.06787412567695,0,0.828478110694391,2.97699613087171,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,3.22655165156182,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,3.01159151174194,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85544384999395,0.218559560503957,0,0,0,0,0,0,0,5.63903507879122,0.837952543656503,0.499705779624645,0,0,0,0,5.50475140085449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,1.91910583710883,0,0.258355639344024,0,0,0.0636471582781649,0,0.435433495793923,0,5.45551629418159,3.22749924267044,0,0,0,0,0,0,0,0,0,3.22038069745642,17.951835568981|short_description=p1@uc001yrw.1,p1@uc001ysj.2,p1@uc001ysk.1,p1@uc001ysl.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=P01854,P01880 | |||
|association_with_transcript=0bp_to_uc001yrw.1,uc001ysj.2,uc001ysk.1,uc001ysl.1_5end | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_1_at_uc001yrw.1_5end,CAGE_peak_1_at_uc001ysj.2_5end,CAGE_peak_1_at_uc001ysk.1_5end,CAGE_peak_1_at_uc001ysl.1_5end | |||
|id=chr14:106329430..106329463,- | |||
|ontology_enrichment_celltype=CL:0000945!2.98e-49!24;CL:0000826!2.98e-49!24;CL:0000236!1.90e-31!14;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000838!3.25e-19!52;CL:0002087!6.58e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-65;24!CL:0000236;3.73e-50;13!CL:0000542;1.40e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.30e-65,24;CL:0000826,1.30e-65,24;CL:0000236,7.33e-55,14;CL:0000838,7.57e-28,52;CL:0000542,3.09e-27,53;CL:0000051,3.09e-27,53;CL:0002087,4.56e-10,115;CL:0002031,1.77e-09,120;CL:0000738,6.88e-08,136;CL:0000817,5.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.40e-18;53!UBERON:0006965;4.13e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-31!115;UBERON:0000178!1.62e-09!15;UBERON:0000179!1.62e-09!15;UBERON:0000463!1.62e-09!15;UBERON:0002106!2.17e-08!3;UBERON:0004854!2.17e-08!3;UBERON:0009034!2.17e-08!3;UBERON:0002095!2.17e-08!3;UBERON:0004782!2.17e-08!3;UBERON:0003281!2.17e-08!3;UBERON:0009664!2.17e-08!3;UBERON:0002296!2.17e-08!3;UBERON:0005602!2.17e-08!3;UBERON:0001179!2.17e-08!3;UBERON:0006293!2.17e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.60e-10;2!UBERON:0004921;1.18e-08;33!UBERON:0001044;1.42e-07;6!UBERON:0003293;1.42e-07;6!UBERON:0003294;1.42e-07;6!UBERON:0010047;1.42e-07;6!UBERON:0003408;1.42e-07;6!UBERON:0000167;1.42e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-17,114;UBERON:0001829,2.42e-10,2;UBERON:0001044,1.48e-07,6;UBERON:0003293,1.48e-07,6;UBERON:0003294,1.48e-07,6;UBERON:0010047,1.48e-07,6;UBERON:0000167,1.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.985207073399349,1.49550484495991,0,0,0,0,0,0,1.00707360754392,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.36910889009705,4.44754626931777,3.84057200309856,6.80673177961221,1.72425731986345,3.96626923670917,4.77026877267682,2.84606484554724,5.87237189370939,8.02773779062981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,2.05681136543097,0,0,2.37937552888281,0,0,0,0.557409525377156,1.58696134274089,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,3.31540698637377,0,0,0.615424027305347,0,0,0,0,1.1837208676432,2.3948309234694,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,5.92665682172372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.45483524732629,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.06787412567695,0,0.828478110694391,2.97699613087171,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,1.64477330057155,0,0,0,0,0,0,0,0,3.22655165156182,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,3.01159151174194,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85544384999395,0.218559560503957,0,0,0,0,0,0,0,5.63903507879122,0.837952543656503,0.499705779624645,0,0,0,0,5.50475140085449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,1.91910583710883,0,0.258355639344024,0,0,0.0636471582781649,0,0.435433495793923,0,5.45551629418159,3.22749924267044,0,0,0,0,0,0,0,0,0,3.22038069745642,17.951835568981 | |||
|short_description=p1@uc001yrw.1,p1@uc001ysj.2,p1@uc001ysk.1,p1@uc001ysl.1 | |||
}} |
Revision as of 03:35, 11 September 2013
Short description: | p1@uc001yrw.1, p1@uc001ysj.2, p1@uc001ysk.1, p1@uc001ysl.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001yrw.1_5end, CAGE_peak_1_at_uc001ysj.2_5end, CAGE_peak_1_at_uc001ysk.1_5end, CAGE_peak_1_at_uc001ysl.1_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 0bp_to_uc001yrw.1, uc001ysj.2, uc001ysk.1, uc001ysl.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.30e-65 | 24 |
pro-B cell | 1.30e-65 | 24 |
B cell | 7.33e-55 | 14 |
lymphoid lineage restricted progenitor cell | 7.57e-28 | 52 |
lymphocyte | 3.09e-27 | 53 |
common lymphoid progenitor | 3.09e-27 | 53 |
nongranular leukocyte | 4.56e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.77e-09 | 120 |
leukocyte | 6.88e-08 | 136 |
precursor B cell | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.61e-17 | 114 |
major salivary gland | 2.42e-10 | 2 |
saliva-secreting gland | 1.48e-07 | 6 |
gland of oral region | 1.48e-07 | 6 |
gland of foregut | 1.48e-07 | 6 |
oral gland | 1.48e-07 | 6 |
oral cavity | 1.48e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.