FFCP PHASE1:Hg19::chr14:103602874..103602882,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:103602874..103602882,+|id=chr14:103602874..103602882,+|ontology_enrichment_celltype=CL:0002057!7.88e-39!42;CL:0002009!2.51e-38!65;CL:0000557!1.01e-37!71;CL:0000766!1.18e-36!76;CL:0000860!1.51e-35!45;CL:0002194!1.77e-35!63;CL:0000576!1.77e-35!63;CL:0000040!1.77e-35!63;CL:0000559!1.77e-35!63;CL:0000839!2.85e-34!70;CL:0000763!1.57e-28!112;CL:0000049!1.57e-28!112;CL:0000738!2.68e-24!140;CL:0002031!1.15e-22!124;CL:0002032!2.98e-20!165;CL:0000837!2.98e-20!165;CL:0002087!1.98e-19!119;CL:0000037!8.44e-19!172;CL:0000566!8.44e-19!172;CL:0000988!9.44e-18!182|ontology_enrichment_celltype_v019=CL:0000473;1.83e-17;39!CL:0000234;1.83e-17;39!CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000235;6.90e-13;6!CL:0000576;8.80e-11;48!CL:0000766;3.42e-09;69!CL:0000767;2.25e-07;3!CL:0002541;2.25e-07;3!CL:0000214;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,1.38e-23,48;CL:0000234,1.38e-23,48;CL:0000766,1.76e-19,72;CL:0002194,8.47e-19,59;CL:0000576,8.47e-19,59;CL:0000040,8.47e-19,59;CL:0000559,8.47e-19,59;CL:0002009,3.52e-18,61;CL:0000839,8.56e-17,66;CL:0000557,1.53e-16,67;CL:0000860,2.03e-15,42;CL:0002057,2.03e-15,42;CL:0000235,6.90e-13,6;CL:0000763,7.17e-13,108;CL:0000049,7.17e-13,108;CL:0000738,4.09e-10,136;CL:0002087,1.68e-09,115;CL:0002031,4.38e-09,120;CL:0002032,1.89e-08,161;CL:0000837,1.89e-08,161;CL:0000037,4.52e-08,168;CL:0000988,1.26e-07,177;CL:0000767,2.19e-07,3;CL:0002541,2.32e-07,3;CL:0000214,3.35e-07,3|ontology_enrichment_development_v019=CL:0002057;1.24e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.00e-32!80;UBERON:0001474!6.71e-29!86;UBERON:0004765!1.17e-25!101;UBERON:0001434!1.17e-25!101;UBERON:0002193!2.47e-24!112;UBERON:0002390!1.36e-23!102;UBERON:0003061!1.36e-23!102;UBERON:0002405!3.36e-22!115;UBERON:0002204!2.55e-14!167;UBERON:0003081!1.28e-07!216|ontology_enrichment_uberon_v019=UBERON:0003124;2.25e-07;3!UBERON:0000920;2.25e-07;3!UBERON:0006915;2.88e-07;3!UBERON:0007616;2.88e-07;3!UBERON:0002217;2.88e-07;3!UBERON:0002018;2.88e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-14,76;UBERON:0001434,6.92e-14,100;UBERON:0001474,1.79e-13,82;UBERON:0004765,3.00e-12,90;UBERON:0002405,7.65e-12,93;UBERON:0002390,3.21e-11,98;UBERON:0003061,3.21e-11,98;UBERON:0002193,3.82e-10,108;UBERON:0002204,4.29e-08,167;UBERON:0000920,2.32e-07,3;UBERON:0006915,3.35e-07,3;UBERON:0007616,3.35e-07,3;UBERON:0002217,3.35e-07,3;UBERON:0002018,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.393364276848904,0,2.47705797305722,0,0,0,0,0,0,0.553995408531877,0,4.55722828503289,0.671746422719773,0,0,0.872389432677388,0.377875943688809,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,3.16461631554365,0.768482119587302,0,0.689491361473237,0.645484683583826,0,0.941211697713023,0.545812300115692,0.224723484445085,1.83650335422542,0,1.27867425159808,0,0.797854630486527,0,0.290209238628584,4.53908179752912,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0,0.949387162322653,0,0,0.209658645508376,0.336985893439485,0.750884464207532,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.234004265139238,1.48631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:103602874..103602882,+ | |||
|id=chr14:103602874..103602882,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.88e-39!42;CL:0002009!2.51e-38!65;CL:0000557!1.01e-37!71;CL:0000766!1.18e-36!76;CL:0000860!1.51e-35!45;CL:0002194!1.77e-35!63;CL:0000576!1.77e-35!63;CL:0000040!1.77e-35!63;CL:0000559!1.77e-35!63;CL:0000839!2.85e-34!70;CL:0000763!1.57e-28!112;CL:0000049!1.57e-28!112;CL:0000738!2.68e-24!140;CL:0002031!1.15e-22!124;CL:0002032!2.98e-20!165;CL:0000837!2.98e-20!165;CL:0002087!1.98e-19!119;CL:0000037!8.44e-19!172;CL:0000566!8.44e-19!172;CL:0000988!9.44e-18!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.83e-17;39!CL:0000234;1.83e-17;39!CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000235;6.90e-13;6!CL:0000576;8.80e-11;48!CL:0000766;3.42e-09;69!CL:0000767;2.25e-07;3!CL:0002541;2.25e-07;3!CL:0000214;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.38e-23,48;CL:0000234,1.38e-23,48;CL:0000766,1.76e-19,72;CL:0002194,8.47e-19,59;CL:0000576,8.47e-19,59;CL:0000040,8.47e-19,59;CL:0000559,8.47e-19,59;CL:0002009,3.52e-18,61;CL:0000839,8.56e-17,66;CL:0000557,1.53e-16,67;CL:0000860,2.03e-15,42;CL:0002057,2.03e-15,42;CL:0000235,6.90e-13,6;CL:0000763,7.17e-13,108;CL:0000049,7.17e-13,108;CL:0000738,4.09e-10,136;CL:0002087,1.68e-09,115;CL:0002031,4.38e-09,120;CL:0002032,1.89e-08,161;CL:0000837,1.89e-08,161;CL:0000037,4.52e-08,168;CL:0000988,1.26e-07,177;CL:0000767,2.19e-07,3;CL:0002541,2.32e-07,3;CL:0000214,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.00e-32!80;UBERON:0001474!6.71e-29!86;UBERON:0004765!1.17e-25!101;UBERON:0001434!1.17e-25!101;UBERON:0002193!2.47e-24!112;UBERON:0002390!1.36e-23!102;UBERON:0003061!1.36e-23!102;UBERON:0002405!3.36e-22!115;UBERON:0002204!2.55e-14!167;UBERON:0003081!1.28e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.25e-07;3!UBERON:0000920;2.25e-07;3!UBERON:0006915;2.88e-07;3!UBERON:0007616;2.88e-07;3!UBERON:0002217;2.88e-07;3!UBERON:0002018;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-14,76;UBERON:0001434,6.92e-14,100;UBERON:0001474,1.79e-13,82;UBERON:0004765,3.00e-12,90;UBERON:0002405,7.65e-12,93;UBERON:0002390,3.21e-11,98;UBERON:0003061,3.21e-11,98;UBERON:0002193,3.82e-10,108;UBERON:0002204,4.29e-08,167;UBERON:0000920,2.32e-07,3;UBERON:0006915,3.35e-07,3;UBERON:0007616,3.35e-07,3;UBERON:0002217,3.35e-07,3;UBERON:0002018,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.393364276848904,0,2.47705797305722,0,0,0,0,0,0,0.553995408531877,0,4.55722828503289,0.671746422719773,0,0,0.872389432677388,0.377875943688809,0.727752183563449,0.464858073811369,0.822335776043652,0.309706370895104,3.16461631554365,0.768482119587302,0,0.689491361473237,0.645484683583826,0,0.941211697713023,0.545812300115692,0.224723484445085,1.83650335422542,0,1.27867425159808,0,0.797854630486527,0,0.290209238628584,4.53908179752912,0.622822248995575,0.251248665256743,1.5644487552606,0.434377689410233,0.605399502633369,0,0.949387162322653,0,0,0.209658645508376,0.336985893439485,0.750884464207532,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.234004265139238,1.48631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,1.50677127429638,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0.23056390438806,0,0,2.23300811812344,0.732780747214898,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0.163565394255844,0,0.737318726261158,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr14:103602874..103602882,+ | |||
}} |
Revision as of 03:23, 11 September 2013
Short description: | p@chr14:103602874..103602882, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:103602874..103602882, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.38e-23 | 48 |
phagocyte | 1.38e-23 | 48 |
myeloid leukocyte | 1.76e-19 | 72 |
monopoietic cell | 8.47e-19 | 59 |
monocyte | 8.47e-19 | 59 |
monoblast | 8.47e-19 | 59 |
promonocyte | 8.47e-19 | 59 |
macrophage dendritic cell progenitor | 3.52e-18 | 61 |
myeloid lineage restricted progenitor cell | 8.56e-17 | 66 |
granulocyte monocyte progenitor cell | 1.53e-16 | 67 |
classical monocyte | 2.03e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-15 | 42 |
macrophage | 6.90e-13 | 6 |
myeloid cell | 7.17e-13 | 108 |
common myeloid progenitor | 7.17e-13 | 108 |
leukocyte | 4.09e-10 | 136 |
nongranular leukocyte | 1.68e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-08 | 161 |
hematopoietic stem cell | 4.52e-08 | 168 |
hematopoietic cell | 1.26e-07 | 177 |
basophil | 2.19e-07 | 3 |
chorionic membrane mesenchymal stem cell | 2.32e-07 | 3 |
synovial cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-14 | 76 |
skeletal system | 6.92e-14 | 100 |
bone element | 1.79e-13 | 82 |
skeletal element | 3.00e-12 | 90 |
immune system | 7.65e-12 | 93 |
hematopoietic system | 3.21e-11 | 98 |
blood island | 3.21e-11 | 98 |
hemolymphoid system | 3.82e-10 | 108 |
musculoskeletal system | 4.29e-08 | 167 |
egg chorion | 2.32e-07 | 3 |
stratified squamous epithelium | 3.35e-07 | 3 |
layer of synovial tissue | 3.35e-07 | 3 |
synovial joint | 3.35e-07 | 3 |
synovial membrane of synovial joint | 3.35e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.