FFCP PHASE1:Hg19::chr14:93397636..93397669,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C76|description=CAGE_peak_at_chr14:93397636..93397669,-|id=chr14:93397636..93397669,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000123;2.89e-13;2!CL:0000242;2.89e-13;2!CL:0000333;1.34e-11;5!CL:0000167;1.17e-07;1!CL:0000164;1.17e-07;1!CL:0000502;1.17e-07;1!CL:0000172;1.17e-07;1!CL:0000173;1.17e-07;1|ontology_enrichment_celltype_v019_2=CL:0000242,2.34e-13,2;CL:0000167,1.18e-07,1;CL:0000164,1.18e-07,1;CL:0000502,1.18e-07,1;CL:0000172,1.18e-07,1;CL:0000173,1.18e-07,1;CL:0002351,1.18e-07,1|ontology_enrichment_development_v019=CL:0002351;1.17e-07;1!UBERON:0006222;2.74e-07;1|ontology_enrichment_disease_v019=DOID:169;1.15e-16;6!DOID:171;4.67e-10;10!DOID:4430;1.17e-07;1|ontology_enrichment_disease_v019_2=DOID:169,1.07e-16,6;DOID:171,4.46e-10,10;DOID:4430,1.18e-07,1|ontology_enrichment_uberon=UBERON:0001049!6.93e-45!57;UBERON:0005068!6.93e-45!57;UBERON:0006241!6.93e-45!57;UBERON:0007135!6.93e-45!57;UBERON:0002780!9.02e-45!41;UBERON:0001890!9.02e-45!41;UBERON:0006240!9.02e-45!41;UBERON:0003080!1.60e-43!42;UBERON:0000073!1.70e-41!94;UBERON:0001016!1.70e-41!94;UBERON:0001893!7.92e-41!34;UBERON:0002020!9.46e-41!34;UBERON:0003528!9.46e-41!34;UBERON:0001869!1.60e-40!32;UBERON:0002616!2.45e-40!59;UBERON:0001017!3.75e-40!82;UBERON:0005743!9.27e-40!86;UBERON:0000955!1.26e-39!69;UBERON:0006238!1.26e-39!69;UBERON:0001950!2.94e-39!20;UBERON:0002619!4.62e-39!22;UBERON:0002791!9.36e-39!33;UBERON:0000956!7.07e-34!25;UBERON:0000203!7.07e-34!25;UBERON:0003056!1.00e-31!61;UBERON:0003075!5.04e-30!86;UBERON:0007284!5.04e-30!86;UBERON:0007023!5.83e-29!115;UBERON:0002346!3.09e-28!90;UBERON:0000033!1.85e-20!123;UBERON:0004121!2.31e-20!169;UBERON:0000153!2.38e-20!129;UBERON:0007811!2.38e-20!129;UBERON:0000924!1.30e-19!173;UBERON:0006601!1.30e-19!173;UBERON:0000200!1.52e-15!6;UBERON:0001871!5.57e-15!7;UBERON:0001872!3.63e-13!5;UBERON:0000025!1.05e-08!194;UBERON:0000064!1.27e-08!219;UBERON:0002308!1.52e-08!9;UBERON:0000125!1.52e-08!9;UBERON:0002771!1.79e-08!3;UBERON:0002021!4.07e-08!5;UBERON:0000988!1.72e-07!3;UBERON:0002298!4.88e-07!8|ontology_enrichment_uberon_v019=UBERON:0001950;6.50e-27;20!UBERON:0000200;6.02e-25;6!UBERON:0002619;2.00e-24;22!UBERON:0000956;2.08e-21;25!UBERON:0000203;2.08e-21;25!UBERON:0001869;6.93e-16;32!UBERON:0002791;1.49e-14;32!UBERON:0001893;3.14e-14;34!UBERON:0001871;4.02e-14;6!UBERON:0003528;6.20e-14;34!UBERON:0002020;6.20e-14;34!UBERON:0002780;3.46e-13;41!UBERON:0001890;3.46e-13;41!UBERON:0002771;6.62e-13;2!UBERON:0002702;6.62e-13;2!UBERON:0000013;1.34e-11;5!UBERON:0002410;1.34e-11;5!UBERON:0001872;1.60e-11;5!UBERON:0001870;6.73e-09;3!UBERON:0000955;8.11e-08;68!UBERON:0002581;1.17e-07;1!UBERON:0000073;1.24e-07;53!UBERON:0002616;1.24e-07;53!UBERON:0003112;2.74e-07;1!UBERON:0011158;2.74e-07;1!UBERON:0003128;2.74e-07;1!UBERON:0001703;2.74e-07;1!UBERON:0002241;2.74e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.75e-27,20;UBERON:0000200,1.57e-24,6;UBERON:0002619,2.35e-24,22;UBERON:0000956,2.40e-21,25;UBERON:0000203,2.40e-21,25;UBERON:0002780,3.60e-18,41;UBERON:0001890,3.60e-18,41;UBERON:0003080,3.60e-18,41;UBERON:0006240,3.60e-18,41;UBERON:0002791,1.88e-16,32;UBERON:0001869,1.88e-16,32;UBERON:0003528,2.05e-15,34;UBERON:0002020,2.05e-15,34;UBERON:0001893,2.05e-15,34;UBERON:0001871,6.61e-14,6;UBERON:0000073,1.25e-13,53;UBERON:0002616,1.25e-13,53;UBERON:0001016,1.93e-13,89;UBERON:0002702,6.64e-13,2;UBERON:0001049,8.60e-13,56;UBERON:0005068,8.60e-13,56;UBERON:0006241,8.60e-13,56;UBERON:0007135,8.60e-13,56;UBERON:0002771,1.74e-12,2;UBERON:0000955,6.33e-12,68;UBERON:0006238,6.33e-12,68;UBERON:0000013,1.25e-11,5;UBERON:0002410,1.25e-11,5;UBERON:0003056,1.40e-11,61;UBERON:0001872,1.55e-11,5;UBERON:0001017,1.15e-09,81;UBERON:0001870,6.74e-09,3;UBERON:0010371,2.13e-08,104;UBERON:0003075,4.34e-08,82;UBERON:0007284,4.34e-08,82;UBERON:0002346,1.29e-07,86;UBERON:0002581,1.42e-07,1;UBERON:0004121,1.60e-07,171;UBERON:0000924,1.60e-07,171;UBERON:0006601,1.60e-07,171;UBERON:0007023,1.60e-07,114;UBERON:0011216,1.84e-07,223;UBERON:0003112,2.35e-07,1;UBERON:0011158,2.35e-07,1;UBERON:0003128,2.35e-07,1;UBERON:0001703,2.35e-07,1;UBERON:0002241,2.35e-07,1;UBERON:0004761,2.35e-07,1;UBERON:0009617,2.35e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr14:93397636..93397669,- | |||
|id=chr14:93397636..93397669,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.89e-13;2!CL:0000242;2.89e-13;2!CL:0000333;1.34e-11;5!CL:0000167;1.17e-07;1!CL:0000164;1.17e-07;1!CL:0000502;1.17e-07;1!CL:0000172;1.17e-07;1!CL:0000173;1.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.34e-13,2;CL:0000167,1.18e-07,1;CL:0000164,1.18e-07,1;CL:0000502,1.18e-07,1;CL:0000172,1.18e-07,1;CL:0000173,1.18e-07,1;CL:0002351,1.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.17e-07;1!UBERON:0006222;2.74e-07;1 | |||
|ontology_enrichment_disease_v019=DOID:169;1.15e-16;6!DOID:171;4.67e-10;10!DOID:4430;1.17e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.07e-16,6;DOID:171,4.46e-10,10;DOID:4430,1.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.93e-45!57;UBERON:0005068!6.93e-45!57;UBERON:0006241!6.93e-45!57;UBERON:0007135!6.93e-45!57;UBERON:0002780!9.02e-45!41;UBERON:0001890!9.02e-45!41;UBERON:0006240!9.02e-45!41;UBERON:0003080!1.60e-43!42;UBERON:0000073!1.70e-41!94;UBERON:0001016!1.70e-41!94;UBERON:0001893!7.92e-41!34;UBERON:0002020!9.46e-41!34;UBERON:0003528!9.46e-41!34;UBERON:0001869!1.60e-40!32;UBERON:0002616!2.45e-40!59;UBERON:0001017!3.75e-40!82;UBERON:0005743!9.27e-40!86;UBERON:0000955!1.26e-39!69;UBERON:0006238!1.26e-39!69;UBERON:0001950!2.94e-39!20;UBERON:0002619!4.62e-39!22;UBERON:0002791!9.36e-39!33;UBERON:0000956!7.07e-34!25;UBERON:0000203!7.07e-34!25;UBERON:0003056!1.00e-31!61;UBERON:0003075!5.04e-30!86;UBERON:0007284!5.04e-30!86;UBERON:0007023!5.83e-29!115;UBERON:0002346!3.09e-28!90;UBERON:0000033!1.85e-20!123;UBERON:0004121!2.31e-20!169;UBERON:0000153!2.38e-20!129;UBERON:0007811!2.38e-20!129;UBERON:0000924!1.30e-19!173;UBERON:0006601!1.30e-19!173;UBERON:0000200!1.52e-15!6;UBERON:0001871!5.57e-15!7;UBERON:0001872!3.63e-13!5;UBERON:0000025!1.05e-08!194;UBERON:0000064!1.27e-08!219;UBERON:0002308!1.52e-08!9;UBERON:0000125!1.52e-08!9;UBERON:0002771!1.79e-08!3;UBERON:0002021!4.07e-08!5;UBERON:0000988!1.72e-07!3;UBERON:0002298!4.88e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.50e-27;20!UBERON:0000200;6.02e-25;6!UBERON:0002619;2.00e-24;22!UBERON:0000956;2.08e-21;25!UBERON:0000203;2.08e-21;25!UBERON:0001869;6.93e-16;32!UBERON:0002791;1.49e-14;32!UBERON:0001893;3.14e-14;34!UBERON:0001871;4.02e-14;6!UBERON:0003528;6.20e-14;34!UBERON:0002020;6.20e-14;34!UBERON:0002780;3.46e-13;41!UBERON:0001890;3.46e-13;41!UBERON:0002771;6.62e-13;2!UBERON:0002702;6.62e-13;2!UBERON:0000013;1.34e-11;5!UBERON:0002410;1.34e-11;5!UBERON:0001872;1.60e-11;5!UBERON:0001870;6.73e-09;3!UBERON:0000955;8.11e-08;68!UBERON:0002581;1.17e-07;1!UBERON:0000073;1.24e-07;53!UBERON:0002616;1.24e-07;53!UBERON:0003112;2.74e-07;1!UBERON:0011158;2.74e-07;1!UBERON:0003128;2.74e-07;1!UBERON:0001703;2.74e-07;1!UBERON:0002241;2.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.75e-27,20;UBERON:0000200,1.57e-24,6;UBERON:0002619,2.35e-24,22;UBERON:0000956,2.40e-21,25;UBERON:0000203,2.40e-21,25;UBERON:0002780,3.60e-18,41;UBERON:0001890,3.60e-18,41;UBERON:0003080,3.60e-18,41;UBERON:0006240,3.60e-18,41;UBERON:0002791,1.88e-16,32;UBERON:0001869,1.88e-16,32;UBERON:0003528,2.05e-15,34;UBERON:0002020,2.05e-15,34;UBERON:0001893,2.05e-15,34;UBERON:0001871,6.61e-14,6;UBERON:0000073,1.25e-13,53;UBERON:0002616,1.25e-13,53;UBERON:0001016,1.93e-13,89;UBERON:0002702,6.64e-13,2;UBERON:0001049,8.60e-13,56;UBERON:0005068,8.60e-13,56;UBERON:0006241,8.60e-13,56;UBERON:0007135,8.60e-13,56;UBERON:0002771,1.74e-12,2;UBERON:0000955,6.33e-12,68;UBERON:0006238,6.33e-12,68;UBERON:0000013,1.25e-11,5;UBERON:0002410,1.25e-11,5;UBERON:0003056,1.40e-11,61;UBERON:0001872,1.55e-11,5;UBERON:0001017,1.15e-09,81;UBERON:0001870,6.74e-09,3;UBERON:0010371,2.13e-08,104;UBERON:0003075,4.34e-08,82;UBERON:0007284,4.34e-08,82;UBERON:0002346,1.29e-07,86;UBERON:0002581,1.42e-07,1;UBERON:0004121,1.60e-07,171;UBERON:0000924,1.60e-07,171;UBERON:0006601,1.60e-07,171;UBERON:0007023,1.60e-07,114;UBERON:0011216,1.84e-07,223;UBERON:0003112,2.35e-07,1;UBERON:0011158,2.35e-07,1;UBERON:0003128,2.35e-07,1;UBERON:0001703,2.35e-07,1;UBERON:0002241,2.35e-07,1;UBERON:0004761,2.35e-07,1;UBERON:0009617,2.35e-07,1 | |||
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|short_description=p@chr14:93397636..93397669,- | |||
}} |
Revision as of 06:03, 11 September 2013
Short description: | p@chr14:93397636..93397669, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:93397636..93397669, - |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.34e-13 | 2 |
peptide hormone secreting cell | 1.18e-07 | 1 |
enteroendocrine cell | 1.18e-07 | 1 |
type D enteroendocrine cell | 1.18e-07 | 1 |
somatostatin secreting cell | 1.18e-07 | 1 |
pancreatic D cell | 1.18e-07 | 1 |
progenitor cell of endocrine pancreas | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.07e-16 | 6 |
neuroectodermal tumor | 4.46e-10 | 10 |
somatostatinoma | 1.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.