FFCP PHASE1:Hg19::chr14:88459457..88459484,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4115 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000556879_5end | |||
|coexpression_cluster_id=C2319 | |||
|description=CAGE_peak_2_at_GALC_5end | |||
|id=chr14:88459457..88459484,- | |||
|ontology_enrichment_celltype=CL:0000766!4.73e-27!76;CL:0000763!2.43e-24!112;CL:0000049!2.43e-24!112;CL:0000557!5.45e-24!71;CL:0000839!6.80e-22!70;CL:0002009!1.84e-20!65;CL:0002057!4.39e-20!42;CL:0002194!2.33e-19!63;CL:0000576!2.33e-19!63;CL:0000040!2.33e-19!63;CL:0000559!2.33e-19!63;CL:0000738!1.78e-18!140;CL:0000037!8.08e-17!172;CL:0000566!8.08e-17!172;CL:0002032!9.52e-17!165;CL:0000837!9.52e-17!165;CL:0000860!3.42e-16!45;CL:0000988!4.37e-15!182;CL:0002031!1.56e-13!124;CL:0002087!2.53e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.99e-16;39!CL:0000234;2.99e-16;39!CL:0000860;9.46e-16;33!CL:0002057;9.46e-16;33!CL:0000766;2.18e-13;69!CL:0000576;2.26e-13;48!CL:0000763;3.58e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.30e-30,72;CL:0000557,3.51e-27,67;CL:0000763,7.75e-27,108;CL:0000049,7.75e-27,108;CL:0000839,6.56e-25,66;CL:0000473,1.37e-23,48;CL:0000234,1.37e-23,48;CL:0002009,1.71e-23,61;CL:0002194,2.45e-22,59;CL:0000576,2.45e-22,59;CL:0000040,2.45e-22,59;CL:0000559,2.45e-22,59;CL:0000738,3.62e-20,136;CL:0000860,4.06e-20,42;CL:0002057,4.06e-20,42;CL:0000037,2.46e-18,168;CL:0002032,2.90e-18,161;CL:0000837,2.90e-18,161;CL:0000988,1.75e-16,177;CL:0002031,5.61e-15,120;CL:0002087,1.24e-12,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.38e-15;42!CL:0000049;4.47e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.45e-22!115;UBERON:0002390!6.16e-22!102;UBERON:0003061!6.16e-22!102;UBERON:0002193!2.13e-20!112;UBERON:0002371!3.10e-18!80;UBERON:0001474!1.70e-16!86;UBERON:0004765!5.93e-14!101;UBERON:0001434!5.93e-14!101;UBERON:0002405!4.18e-13!115;UBERON:0003081!1.37e-11!216;UBERON:0001049!2.38e-11!57;UBERON:0005068!2.38e-11!57;UBERON:0006241!2.38e-11!57;UBERON:0007135!2.38e-11!57;UBERON:0002616!1.03e-09!59;UBERON:0003080!1.63e-09!42;UBERON:0002780!2.79e-09!41;UBERON:0001890!2.79e-09!41;UBERON:0006240!2.79e-09!41;UBERON:0002204!5.42e-08!167;UBERON:0002020!1.13e-07!34;UBERON:0003528!1.13e-07!34;UBERON:0001017!2.75e-07!82;UBERON:0001893!2.88e-07!34;UBERON:0002791!3.00e-07!33;UBERON:0000955!6.83e-07!69;UBERON:0006238!6.83e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.85e-07;41!UBERON:0001890;1.85e-07;41 | |||
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| |||
|short_description=p2@GALC | |||
}} |
Revision as of 05:50, 11 September 2013
Short description: | p2@GALC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GALC_5end |
Coexpression cluster: | C2319_Eosinophils_large_immature_Neutrophils_small_migratory_Mast |
Association with transcript: | 0bp_to_ENST00000556879_5end |
EntrezGene: | GALC |
HGNC: | 4115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.30e-30 | 72 |
granulocyte monocyte progenitor cell | 3.51e-27 | 67 |
myeloid cell | 7.75e-27 | 108 |
common myeloid progenitor | 7.75e-27 | 108 |
myeloid lineage restricted progenitor cell | 6.56e-25 | 66 |
defensive cell | 1.37e-23 | 48 |
phagocyte | 1.37e-23 | 48 |
macrophage dendritic cell progenitor | 1.71e-23 | 61 |
monopoietic cell | 2.45e-22 | 59 |
monocyte | 2.45e-22 | 59 |
monoblast | 2.45e-22 | 59 |
promonocyte | 2.45e-22 | 59 |
leukocyte | 3.62e-20 | 136 |
classical monocyte | 4.06e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-20 | 42 |
hematopoietic stem cell | 2.46e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.90e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-18 | 161 |
hematopoietic cell | 1.75e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 5.61e-15 | 120 |
nongranular leukocyte | 1.24e-12 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.46e-24 | 98 |
blood island | 3.46e-24 | 98 |
hemolymphoid system | 2.33e-22 | 108 |
adult organism | 8.22e-22 | 114 |
bone marrow | 1.42e-20 | 76 |
immune system | 4.65e-19 | 93 |
bone element | 1.19e-18 | 82 |
skeletal element | 1.39e-16 | 90 |
skeletal system | 1.87e-14 | 100 |
lateral plate mesoderm | 2.41e-14 | 203 |
neural tube | 4.13e-11 | 56 |
neural rod | 4.13e-11 | 56 |
future spinal cord | 4.13e-11 | 56 |
neural keel | 4.13e-11 | 56 |
regional part of nervous system | 7.61e-10 | 53 |
regional part of brain | 7.61e-10 | 53 |
regional part of forebrain | 2.70e-09 | 41 |
forebrain | 2.70e-09 | 41 |
anterior neural tube | 2.70e-09 | 41 |
future forebrain | 2.70e-09 | 41 |
musculoskeletal system | 3.13e-08 | 167 |
brain grey matter | 1.10e-07 | 34 |
gray matter | 1.10e-07 | 34 |
telencephalon | 2.81e-07 | 34 |
central nervous system | 3.41e-07 | 81 |
regional part of telencephalon | 6.64e-07 | 32 |
brain | 8.48e-07 | 68 |
future brain | 8.48e-07 | 68 |
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