FFCP PHASE1:Hg19::chr14:69951439..69951452,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=400224|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20148|TSSclassifier=S|UniProt=A6NEE1,B9EJC2|association_with_transcript=-18bp_to_ENST00000322564,NM_001161498,uc001xli.2,uc010ttf.1_5end|coexpression_cluster_id=C44|description=CAGE_peak_2_at_PLEKHD1_5end|id=chr14:69951439..69951452,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000415;5.71e-09;2|ontology_enrichment_celltype_v019_2=CL:1000415,5.49e-09,2|ontology_enrichment_development_v019=UBERON:0006215;5.53e-47;3!UBERON:0005754;2.25e-16;1!UBERON:0007297;7.49e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.80e-31!57;UBERON:0005068!1.80e-31!57;UBERON:0006241!1.80e-31!57;UBERON:0007135!1.80e-31!57;UBERON:0007023!8.54e-29!115;UBERON:0002616!9.06e-28!59;UBERON:0000955!2.78e-24!69;UBERON:0006238!2.78e-24!69;UBERON:0005743!5.81e-23!86;UBERON:0001017!1.33e-22!82;UBERON:0002780!2.80e-22!41;UBERON:0001890!2.80e-22!41;UBERON:0006240!2.80e-22!41;UBERON:0003080!1.25e-21!42;UBERON:0000073!5.11e-20!94;UBERON:0001016!5.11e-20!94;UBERON:0003075!6.02e-20!86;UBERON:0007284!6.02e-20!86;UBERON:0002346!1.04e-18!90;UBERON:0000153!4.62e-16!129;UBERON:0007811!4.62e-16!129;UBERON:0001893!5.42e-15!34;UBERON:0003056!6.20e-15!61;UBERON:0001869!4.38e-14!32;UBERON:0000033!9.45e-14!123;UBERON:0002791!2.20e-13!33;UBERON:0002020!5.35e-13!34;UBERON:0003528!5.35e-13!34;UBERON:0001950!1.33e-12!20;UBERON:0002619!2.66e-11!22;UBERON:0003076!4.92e-11!15;UBERON:0003057!4.92e-11!15;UBERON:0004733!6.61e-11!12;UBERON:0002028!6.61e-11!12;UBERON:0007277!6.61e-11!12;UBERON:0004121!4.55e-10!169;UBERON:0001894!4.57e-10!7;UBERON:0006222!4.57e-10!7;UBERON:0004732!5.64e-10!13;UBERON:0000956!9.96e-10!25;UBERON:0000203!9.96e-10!25;UBERON:0000924!1.20e-09!173;UBERON:0006601!1.20e-09!173;UBERON:0000025!1.99e-08!194;UBERON:0004111!3.00e-08!241;UBERON:0000477!3.02e-08!286;UBERON:0000475!3.65e-08!365;UBERON:0002680!5.16e-08!9;UBERON:0001895!5.16e-08!9;UBERON:0010092!5.16e-08!9;UBERON:0000200!2.89e-07!6;UBERON:0001905!5.46e-07!2;UBERON:0002757!5.46e-07!2;UBERON:0010134!5.46e-07!2;UBERON:0002784!5.46e-07!2;UBERON:0005408!5.46e-07!2;UBERON:0001899!5.46e-07!2|ontology_enrichment_uberon_v019=UBERON:0002037;6.70e-24;6!UBERON:0000998;2.25e-16;1!UBERON:0006868;2.25e-16;1!UBERON:0002680;3.60e-16;9!UBERON:0001895;3.60e-16;9!UBERON:0004733;2.75e-12;12!UBERON:0002028;2.75e-12;12!UBERON:0004732;2.18e-11;13!UBERON:0001905;4.70e-09;2!UBERON:0002757;4.70e-09;2!UBERON:0010134;4.70e-09;2!UBERON:0005408;4.70e-09;2!UBERON:0001899;4.70e-09;2!UBERON:0000341;7.49e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.70e-24,6;UBERON:0006215,6.70e-24,6;UBERON:0000998,2.25e-16,1;UBERON:0006868,2.25e-16,1;UBERON:0002680,3.61e-16,9;UBERON:0001895,3.61e-16,9;UBERON:0010092,3.61e-16,9;UBERON:0004733,2.75e-12,12;UBERON:0002028,2.75e-12,12;UBERON:0007277,2.75e-12,12;UBERON:0004732,2.18e-11,13;UBERON:0003076,6.02e-10,15;UBERON:0003057,6.02e-10,15;UBERON:0001905,5.08e-09,2;UBERON:0002757,5.08e-09,2;UBERON:0010134,5.08e-09,2;UBERON:0005408,5.08e-09,2;UBERON:0001899,5.08e-09,2;UBERON:0000341,8.09e-09,2;UBERON:0007023,6.37e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6105718062289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,3.05163472634166,4.09143261745531,5.6154047601174,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,2.48578814858586,0,0,0.316553979779393,2.73771935828724,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=400224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20148 | |||
|TSSclassifier=S | |||
|UniProt=A6NEE1,B9EJC2 | |||
|association_with_transcript=-18bp_to_ENST00000322564,NM_001161498,uc001xli.2,uc010ttf.1_5end | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_2_at_PLEKHD1_5end | |||
|id=chr14:69951439..69951452,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;5.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.53e-47;3!UBERON:0005754;2.25e-16;1!UBERON:0007297;7.49e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.80e-31!57;UBERON:0005068!1.80e-31!57;UBERON:0006241!1.80e-31!57;UBERON:0007135!1.80e-31!57;UBERON:0007023!8.54e-29!115;UBERON:0002616!9.06e-28!59;UBERON:0000955!2.78e-24!69;UBERON:0006238!2.78e-24!69;UBERON:0005743!5.81e-23!86;UBERON:0001017!1.33e-22!82;UBERON:0002780!2.80e-22!41;UBERON:0001890!2.80e-22!41;UBERON:0006240!2.80e-22!41;UBERON:0003080!1.25e-21!42;UBERON:0000073!5.11e-20!94;UBERON:0001016!5.11e-20!94;UBERON:0003075!6.02e-20!86;UBERON:0007284!6.02e-20!86;UBERON:0002346!1.04e-18!90;UBERON:0000153!4.62e-16!129;UBERON:0007811!4.62e-16!129;UBERON:0001893!5.42e-15!34;UBERON:0003056!6.20e-15!61;UBERON:0001869!4.38e-14!32;UBERON:0000033!9.45e-14!123;UBERON:0002791!2.20e-13!33;UBERON:0002020!5.35e-13!34;UBERON:0003528!5.35e-13!34;UBERON:0001950!1.33e-12!20;UBERON:0002619!2.66e-11!22;UBERON:0003076!4.92e-11!15;UBERON:0003057!4.92e-11!15;UBERON:0004733!6.61e-11!12;UBERON:0002028!6.61e-11!12;UBERON:0007277!6.61e-11!12;UBERON:0004121!4.55e-10!169;UBERON:0001894!4.57e-10!7;UBERON:0006222!4.57e-10!7;UBERON:0004732!5.64e-10!13;UBERON:0000956!9.96e-10!25;UBERON:0000203!9.96e-10!25;UBERON:0000924!1.20e-09!173;UBERON:0006601!1.20e-09!173;UBERON:0000025!1.99e-08!194;UBERON:0004111!3.00e-08!241;UBERON:0000477!3.02e-08!286;UBERON:0000475!3.65e-08!365;UBERON:0002680!5.16e-08!9;UBERON:0001895!5.16e-08!9;UBERON:0010092!5.16e-08!9;UBERON:0000200!2.89e-07!6;UBERON:0001905!5.46e-07!2;UBERON:0002757!5.46e-07!2;UBERON:0010134!5.46e-07!2;UBERON:0002784!5.46e-07!2;UBERON:0005408!5.46e-07!2;UBERON:0001899!5.46e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.70e-24;6!UBERON:0000998;2.25e-16;1!UBERON:0006868;2.25e-16;1!UBERON:0002680;3.60e-16;9!UBERON:0001895;3.60e-16;9!UBERON:0004733;2.75e-12;12!UBERON:0002028;2.75e-12;12!UBERON:0004732;2.18e-11;13!UBERON:0001905;4.70e-09;2!UBERON:0002757;4.70e-09;2!UBERON:0010134;4.70e-09;2!UBERON:0005408;4.70e-09;2!UBERON:0001899;4.70e-09;2!UBERON:0000341;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.70e-24,6;UBERON:0006215,6.70e-24,6;UBERON:0000998,2.25e-16,1;UBERON:0006868,2.25e-16,1;UBERON:0002680,3.61e-16,9;UBERON:0001895,3.61e-16,9;UBERON:0010092,3.61e-16,9;UBERON:0004733,2.75e-12,12;UBERON:0002028,2.75e-12,12;UBERON:0007277,2.75e-12,12;UBERON:0004732,2.18e-11,13;UBERON:0003076,6.02e-10,15;UBERON:0003057,6.02e-10,15;UBERON:0001905,5.08e-09,2;UBERON:0002757,5.08e-09,2;UBERON:0010134,5.08e-09,2;UBERON:0005408,5.08e-09,2;UBERON:0001899,5.08e-09,2;UBERON:0000341,8.09e-09,2;UBERON:0007023,6.37e-08,114 | |||
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|short_description=p2@PLEKHD1 | |||
}} |
Revision as of 05:20, 11 September 2013
Short description: | p2@PLEKHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PLEKHD1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -18bp_to_ENST00000322564, NM_001161498, uc001xli.2, uc010ttf.1_5end |
EntrezGene: | PLEKHD1 |
HGNC: | 20148 |
UniProt: | A6NEE1B9EJC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.70e-24 | 6 |
rhombic lip | 6.70e-24 | 6 |
seminal vesicle | 2.25e-16 | 1 |
seminal fluid secreting gland | 2.25e-16 | 1 |
regional part of metencephalon | 3.61e-16 | 9 |
metencephalon | 3.61e-16 | 9 |
future metencephalon | 3.61e-16 | 9 |
segmental subdivision of hindbrain | 2.75e-12 | 12 |
hindbrain | 2.75e-12 | 12 |
presumptive hindbrain | 2.75e-12 | 12 |
segmental subdivision of nervous system | 2.18e-11 | 13 |
posterior neural tube | 6.02e-10 | 15 |
chordal neural plate | 6.02e-10 | 15 |
pineal body | 5.08e-09 | 2 |
regional part of epithalamus | 5.08e-09 | 2 |
secretory circumventricular organ | 5.08e-09 | 2 |
circumventricular organ | 5.08e-09 | 2 |
epithalamus | 5.08e-09 | 2 |
throat | 8.09e-09 | 2 |
adult organism | 6.37e-08 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.