FFCP PHASE1:Hg19::chr14:67708626..67708643,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:67708626..67708643,-|id=chr14:67708626..67708643,-|ontology_enrichment_celltype=CL:0002009!6.52e-10!65;CL:0000012!1.65e-09!682;CL:0000860!1.77e-09!45;CL:0000548!2.60e-09!679;CL:0000004!2.60e-09!679;CL:0000255!2.60e-09!679;CL:0000557!3.69e-09!71;CL:0002194!5.25e-09!63;CL:0000576!5.25e-09!63;CL:0000040!5.25e-09!63;CL:0000559!5.25e-09!63;CL:0002057!1.08e-08!42;CL:0000839!4.96e-08!70;CL:0000766!8.20e-08!76|ontology_enrichment_celltype_v019=CL:0000860;6.08e-15;33!CL:0002057;6.08e-15;33!CL:0000473;7.12e-13;39!CL:0000234;7.12e-13;39!CL:0000576;8.23e-09;48!CL:1000306;2.48e-08;4!CL:0002547;2.48e-08;4!CL:0002539;2.57e-07;10|ontology_enrichment_celltype_v019_2=CL:0000473,7.43e-14,48;CL:0000234,7.43e-14,48;CL:0000860,4.94e-13,42;CL:0002057,4.94e-13,42;CL:0002194,9.31e-11,59;CL:0000576,9.31e-11,59;CL:0000040,9.31e-11,59;CL:0000559,9.31e-11,59;CL:0002009,2.34e-10,61;CL:0000839,1.83e-09,66;CL:0000557,2.67e-09,67;CL:1000306,1.42e-08,4;CL:0002547,1.42e-08,4;CL:0000766,1.49e-08,72;CL:0002539,2.75e-07,10|ontology_enrichment_development_v019=CL:0002057;2.18e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3347;9.70e-09;1|ontology_enrichment_disease_v019_2=DOID:3347,1.05e-08,1|ontology_enrichment_uberon=UBERON:0002204!4.89e-09!167;UBERON:0001637!4.98e-09!42;UBERON:0003509!4.98e-09!42;UBERON:0004572!4.98e-09!42;UBERON:0001474!2.30e-08!86;UBERON:0002371!5.50e-08!80;UBERON:0003081!1.04e-07!216;UBERON:0004765!1.14e-07!101;UBERON:0001434!1.14e-07!101;UBERON:0004573!1.69e-07!33;UBERON:0004571!1.69e-07!33;UBERON:0001981!5.28e-07!60;UBERON:0007500!5.28e-07!60;UBERON:0004537!5.28e-07!60;UBERON:0006965!5.28e-07!60|ontology_enrichment_uberon_v019=UBERON:0000947;9.69e-09;21!UBERON:0010191;9.69e-09;21!UBERON:0004913;9.70e-09;1!UBERON:0003703;9.70e-09;1!UBERON:0001174;9.70e-09;1!UBERON:0004914;9.70e-09;1!UBERON:0004797;2.48e-08;4!UBERON:0000415;2.48e-08;4!UBERON:0007240;2.48e-08;4!UBERON:0005742;2.48e-08;4!UBERON:0005734;2.48e-08;4!UBERON:0004664;2.48e-08;4!UBERON:0004663;2.48e-08;4!UBERON:0004573;1.52e-07;33!UBERON:0004571;1.52e-07;33!UBERON:0004237;2.57e-07;10!UBERON:0004695;2.57e-07;10!UBERON:0002111;2.57e-07;10!UBERON:0004178;2.57e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.16e-09,1;UBERON:0003703,6.16e-09,1;UBERON:0001174,6.16e-09,1;UBERON:0004914,6.16e-09,1;UBERON:0001474,6.26e-09,82;UBERON:0000947,7.95e-09,21;UBERON:0010191,7.95e-09,21;UBERON:0000415,1.42e-08,4;UBERON:0007240,1.42e-08,4;UBERON:0005742,1.42e-08,4;UBERON:0005734,1.42e-08,4;UBERON:0004664,1.42e-08,4;UBERON:0004663,1.42e-08,4;UBERON:0002371,5.04e-08,76;UBERON:0004765,5.56e-08,90;UBERON:0004573,1.09e-07,33;UBERON:0004571,1.09e-07,33;UBERON:0003081,2.32e-07,203;UBERON:0004237,2.75e-07,10;UBERON:0004695,2.75e-07,10;UBERON:0002111,2.75e-07,10;UBERON:0004178,2.75e-07,10;UBERON:0002204,3.99e-07,167;UBERON:0001434,5.23e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0.697287110717054,0.411167888021826,0,2.3015391385772,0.768482119587302,1.41889337933151,1.37898272294647,0,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0.320929027076094,0,0.659702600373432,0.797854630486527,0.426224750532694,1.45104619314292,1.70215567407342,0,3.01498398308092,1.5644487552606,1.08594422352558,0.605399502633369,1.10483290796269,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0.175669571386252,0.589405839739707,0,0,0,0.174129737299267,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,1.89853131913626,0,0,0,0,0,0,1.45650098894541,1.72101972449288,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0.309157587715317,0.257640540045629,0,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0,0.503760491138201,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:67708626..67708643,- | |||
|id=chr14:67708626..67708643,- | |||
|ontology_enrichment_celltype=CL:0002009!6.52e-10!65;CL:0000012!1.65e-09!682;CL:0000860!1.77e-09!45;CL:0000548!2.60e-09!679;CL:0000004!2.60e-09!679;CL:0000255!2.60e-09!679;CL:0000557!3.69e-09!71;CL:0002194!5.25e-09!63;CL:0000576!5.25e-09!63;CL:0000040!5.25e-09!63;CL:0000559!5.25e-09!63;CL:0002057!1.08e-08!42;CL:0000839!4.96e-08!70;CL:0000766!8.20e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-15;33!CL:0002057;6.08e-15;33!CL:0000473;7.12e-13;39!CL:0000234;7.12e-13;39!CL:0000576;8.23e-09;48!CL:1000306;2.48e-08;4!CL:0002547;2.48e-08;4!CL:0002539;2.57e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.43e-14,48;CL:0000234,7.43e-14,48;CL:0000860,4.94e-13,42;CL:0002057,4.94e-13,42;CL:0002194,9.31e-11,59;CL:0000576,9.31e-11,59;CL:0000040,9.31e-11,59;CL:0000559,9.31e-11,59;CL:0002009,2.34e-10,61;CL:0000839,1.83e-09,66;CL:0000557,2.67e-09,67;CL:1000306,1.42e-08,4;CL:0002547,1.42e-08,4;CL:0000766,1.49e-08,72;CL:0002539,2.75e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;9.70e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.89e-09!167;UBERON:0001637!4.98e-09!42;UBERON:0003509!4.98e-09!42;UBERON:0004572!4.98e-09!42;UBERON:0001474!2.30e-08!86;UBERON:0002371!5.50e-08!80;UBERON:0003081!1.04e-07!216;UBERON:0004765!1.14e-07!101;UBERON:0001434!1.14e-07!101;UBERON:0004573!1.69e-07!33;UBERON:0004571!1.69e-07!33;UBERON:0001981!5.28e-07!60;UBERON:0007500!5.28e-07!60;UBERON:0004537!5.28e-07!60;UBERON:0006965!5.28e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;9.69e-09;21!UBERON:0010191;9.69e-09;21!UBERON:0004913;9.70e-09;1!UBERON:0003703;9.70e-09;1!UBERON:0001174;9.70e-09;1!UBERON:0004914;9.70e-09;1!UBERON:0004797;2.48e-08;4!UBERON:0000415;2.48e-08;4!UBERON:0007240;2.48e-08;4!UBERON:0005742;2.48e-08;4!UBERON:0005734;2.48e-08;4!UBERON:0004664;2.48e-08;4!UBERON:0004663;2.48e-08;4!UBERON:0004573;1.52e-07;33!UBERON:0004571;1.52e-07;33!UBERON:0004237;2.57e-07;10!UBERON:0004695;2.57e-07;10!UBERON:0002111;2.57e-07;10!UBERON:0004178;2.57e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,6.16e-09,1;UBERON:0003703,6.16e-09,1;UBERON:0001174,6.16e-09,1;UBERON:0004914,6.16e-09,1;UBERON:0001474,6.26e-09,82;UBERON:0000947,7.95e-09,21;UBERON:0010191,7.95e-09,21;UBERON:0000415,1.42e-08,4;UBERON:0007240,1.42e-08,4;UBERON:0005742,1.42e-08,4;UBERON:0005734,1.42e-08,4;UBERON:0004664,1.42e-08,4;UBERON:0004663,1.42e-08,4;UBERON:0002371,5.04e-08,76;UBERON:0004765,5.56e-08,90;UBERON:0004573,1.09e-07,33;UBERON:0004571,1.09e-07,33;UBERON:0003081,2.32e-07,203;UBERON:0004237,2.75e-07,10;UBERON:0004695,2.75e-07,10;UBERON:0002111,2.75e-07,10;UBERON:0004178,2.75e-07,10;UBERON:0002204,3.99e-07,167;UBERON:0001434,5.23e-07,100 | |||
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| |||
|short_description=p@chr14:67708626..67708643,- | |||
}} |
Revision as of 05:13, 11 September 2013
Short description: | p@chr14:67708626..67708643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:67708626..67708643, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.43e-14 | 48 |
phagocyte | 7.43e-14 | 48 |
classical monocyte | 4.94e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.94e-13 | 42 |
monopoietic cell | 9.31e-11 | 59 |
monocyte | 9.31e-11 | 59 |
monoblast | 9.31e-11 | 59 |
promonocyte | 9.31e-11 | 59 |
macrophage dendritic cell progenitor | 2.34e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.83e-09 | 66 |
granulocyte monocyte progenitor cell | 2.67e-09 | 67 |
fibroblast of tunica adventitia of artery | 1.42e-08 | 4 |
fibroblast of the aortic adventitia | 1.42e-08 | 4 |
myeloid leukocyte | 1.49e-08 | 72 |
aortic smooth muscle cell | 2.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 6.16e-09 | 1 |
extrahepatic bile duct | 6.16e-09 | 1 |
common bile duct | 6.16e-09 | 1 |
duodenal papilla | 6.16e-09 | 1 |
bone element | 6.26e-09 | 82 |
aorta | 7.95e-09 | 21 |
aortic system | 7.95e-09 | 21 |
artery wall | 1.42e-08 | 4 |
tunica adventitia of artery | 1.42e-08 | 4 |
adventitia | 1.42e-08 | 4 |
tunica adventitia of blood vessel | 1.42e-08 | 4 |
aorta tunica adventitia | 1.42e-08 | 4 |
aorta wall | 1.42e-08 | 4 |
bone marrow | 5.04e-08 | 76 |
skeletal element | 5.56e-08 | 90 |
systemic artery | 1.09e-07 | 33 |
systemic arterial system | 1.09e-07 | 33 |
lateral plate mesoderm | 2.32e-07 | 203 |
blood vessel smooth muscle | 2.75e-07 | 10 |
arterial system smooth muscle | 2.75e-07 | 10 |
artery smooth muscle tissue | 2.75e-07 | 10 |
aorta smooth muscle tissue | 2.75e-07 | 10 |
musculoskeletal system | 3.99e-07 | 167 |
skeletal system | 5.23e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.05e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.