FFCP PHASE1:Hg19::chr14:53162285..53162297,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30001|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13280|TSSclassifier=S|UniProt=G3V5B3,G3V503|association_with_transcript=-38bp_to_ENST00000554251,ENST00000556223_5end|coexpression_cluster_id=C3431|description=CAGE_peak_5_at_ERO1L_5end|id=chr14:53162285..53162297,-|ontology_enrichment_celltype=CL:0002371!7.80e-11!591;CL:0000548!3.68e-09!679;CL:0000004!3.68e-09!679;CL:0000255!3.68e-09!679;CL:0000144!4.77e-09!625;CL:0000012!4.89e-09!682;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000359!4.08e-08!32;CL:0000723!3.48e-07!436;CL:0000034!3.76e-07!444;CL:0000680!4.10e-07!57;CL:0000056!4.10e-07!57;CL:0000355!4.10e-07!57;CL:0000048!7.35e-07!430;CL:0000063!9.93e-07!578|ontology_enrichment_celltype_v019=CL:0000359;6.68e-08;32|ontology_enrichment_celltype_v019_2=CL:0000359,9.63e-09,32;CL:0000192,1.62e-08,43;CL:0000514,1.62e-08,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.76e-09!14|ontology_enrichment_disease_v019=DOID:2394;7.14e-11;14!DOID:120;5.03e-08;27!DOID:193;1.51e-07;29|ontology_enrichment_disease_v019_2=DOID:2394,8.98e-11,14;DOID:120,6.12e-08,27;DOID:193,2.12e-07,29|ontology_enrichment_uberon=UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0004573!5.95e-07!33;UBERON:0004571!5.95e-07!33;UBERON:0000486!6.37e-07!82|ontology_enrichment_uberon_v019=UBERON:0004573;4.78e-07;33!UBERON:0004571;4.78e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.88e-08,33;UBERON:0004571,3.88e-08,33;UBERON:0001637,1.31e-07,42;UBERON:0003509,1.31e-07,42;UBERON:0004572,1.31e-07,42|phase1_expression=2.18014055124668,2.5692062866918,2.25527046553554,2.00146596706261,1.34088328328186,2.61701557230111,0,4.42203911398782,0.783556884599516,2.94880723801811,0,0.655324116390517,0.527533956456907,0.866364470720326,1.32558950291166,3.36162573225888,2.41077811209591,2.92124036154949,1.95173119516203,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,4.50839093912912,3.20192298854788,3.06972047123349,0,1.53531759238885,1.39334510984468,1.83884244895785,1.8072355126695,1.10926203050036,0.387336002901508,2.41687695228617,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0.447830948479849,0.971680998056939,1.28787783817093,0.872389432677388,0.755751887377619,1.69808842831471,0.464858073811369,1.23350366406548,0.929119112685311,2.01384674625505,1.0246428261164,2.12834006899727,2.06847408441971,0.645484683583826,1.35426486594342,1.31769637679823,2.72906150057846,1.12361742222542,0.918251677112708,2.56743221660875,1.27867425159808,1.64925650093358,1.99463657621632,0.852449501065388,0.870627715885752,0.56738522469114,0,2.26123798731069,0,1.73751075764093,1.81619850790011,2.20966581592539,0.316462387440884,1.05627643155971,0.850417199860174,0.838634582033504,0.898629049171961,0.750884464207532,0.803627933485401,0.285012743741249,0.19891667719909,0.730656615058536,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,1.68152568894461,0.526768169550154,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,2.1167986808183,0.883817722424512,1.10766947291811,0.541607727530031,1.0247305578054,0.520237390239513,0.328875809207352,1.38175008892924,0.579606171470105,0.14828656316206,0.267540828089713,0,1.58633079776593,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.255973222308837,1.24930726552346,0.473554504088034,0,0.80642697289893,0,0.579297615531196,0,0.670700859703636,8.69465420536006,1.0843174571537,1.00267582127178,0.869079113764942,1.5905718941022,9.73269740605272,0.189069634328136,0,0.43917392846563,0.261958150995425,1.09288586487763,2.22470665670658,2.27183175558278,3.48259474598534,1.59549552622638,0.238490624305342,0,0,0.39752481473341,0,1.04142150482278,0,1.25849830862972,0.550236083880135,0,3.10100111003195,4.26919515224052,4.35136796594071,0,3.04108842287405,0.732186172644509,0.735326160691737,1.62028389576352,0.803697554556718,0.44905874525234,0.337834441449967,0,0,0.549605231791222,2.63560834872127,3.87780264148325,3.05265836499774,4.96971951695318,1.77282716330412,2.78059279707759,4.01571269048339,0.709336764396714,2.24271040056923,2.1349799145941,1.97334038733728,0.933633106199299,0.942974704487816,1.30769522490767,0.756787138224657,0.576175924479999,0,2.80944069147288,1.1409436430889,1.79338416662161,0.352303495931295,0.161872944368132,0.98315564691574,0.61246251376468,0.737005903870608,0.826606249406124,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.375355559615893,1.38532057742091,0.438977620880838,1.5324389789951,0.300476117813194,2.38207584636044,2.15267562826634,3.63047560991565,8.68920794754204,2.40072876867522,2.57631323096097,1.03056216018252,2.04728541964749,2.02531598689519,2.72823614451356,1.26216887122057,1.84099797284599,1.77810662500693,2.84007674013291,2.31729825923573,2.03472710772585,4.05847791642923,6.0004146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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13280 | |||
|TSSclassifier=S | |||
|UniProt=G3V5B3,G3V503 | |||
|association_with_transcript=-38bp_to_ENST00000554251,ENST00000556223_5end | |||
|coexpression_cluster_id=C3431 | |||
|description=CAGE_peak_5_at_ERO1L_5end | |||
|id=chr14:53162285..53162297,- | |||
|ontology_enrichment_celltype=CL:0002371!7.80e-11!591;CL:0000548!3.68e-09!679;CL:0000004!3.68e-09!679;CL:0000255!3.68e-09!679;CL:0000144!4.77e-09!625;CL:0000012!4.89e-09!682;CL:0000192!6.87e-09!42;CL:0000514!6.87e-09!42;CL:0000359!4.08e-08!32;CL:0000723!3.48e-07!436;CL:0000034!3.76e-07!444;CL:0000680!4.10e-07!57;CL:0000056!4.10e-07!57;CL:0000355!4.10e-07!57;CL:0000048!7.35e-07!430;CL:0000063!9.93e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.68e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.63e-09,32;CL:0000192,1.62e-08,43;CL:0000514,1.62e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.76e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.14e-11;14!DOID:120;5.03e-08;27!DOID:193;1.51e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.98e-11,14;DOID:120,6.12e-08,27;DOID:193,2.12e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000926!4.23e-07!448;UBERON:0004120!4.23e-07!448;UBERON:0006603!4.23e-07!448;UBERON:0004573!5.95e-07!33;UBERON:0004571!5.95e-07!33;UBERON:0000486!6.37e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.78e-07;33!UBERON:0004571;4.78e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.88e-08,33;UBERON:0004571,3.88e-08,33;UBERON:0001637,1.31e-07,42;UBERON:0003509,1.31e-07,42;UBERON:0004572,1.31e-07,42 | |||
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| |||
|short_description=p5@ERO1L | |||
}} |
Revision as of 04:46, 11 September 2013
Short description: | p5@ERO1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ERO1L_5end |
Coexpression cluster: | C3431_Small_Smooth_Prostate_esophagus_Urothelial_Gingival_renal |
Association with transcript: | -38bp_to_ENST00000554251, ENST00000556223_5end |
EntrezGene: | ERO1L |
HGNC: | 13280 |
UniProt: | G3V5B3G3V503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.63e-09 | 32 |
smooth muscle cell | 1.62e-08 | 43 |
smooth muscle myoblast | 1.62e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 3.88e-08 | 33 |
systemic arterial system | 3.88e-08 | 33 |
artery | 1.31e-07 | 42 |
arterial blood vessel | 1.31e-07 | 42 |
arterial system | 1.31e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.98e-11 | 14 |
female reproductive organ cancer | 6.12e-08 | 27 |
reproductive organ cancer | 2.12e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.