FFCP PHASE1:Hg19::chr14:50467993..50468012,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:50467993..50468012,-|id=chr14:50467993..50468012,-|ontology_enrichment_celltype=CL:0000542!5.02e-11!53;CL:0000051!5.02e-11!53;CL:0000838!2.05e-10!52;CL:0000945!6.84e-08!24;CL:0000826!6.84e-08!24|ontology_enrichment_celltype_v019=CL:0000945;4.45e-14;24!CL:0002127;3.17e-07;1!CL:0000911;3.17e-07;1!CL:0000814;3.17e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,4.80e-14,24;CL:0000826,4.80e-14,24;CL:0000838,3.33e-09,52;CL:0000542,5.36e-09,53;CL:0000051,5.36e-09,53;CL:0002127,2.66e-07,1;CL:0000914,2.66e-07,1;CL:0000911,2.66e-07,1;CL:0000814,2.66e-07,1;CL:0002042,2.66e-07,1;CL:0002039,2.66e-07,1;CL:0002040,2.66e-07,1;CL:0002041,2.66e-07,1|ontology_enrichment_development_v019=UBERON:0006298;8.23e-07;1!UBERON:0008801;8.23e-07;1|ontology_enrichment_disease=DOID:305!3.24e-13!106;DOID:299!1.46e-08!25;DOID:0050687!4.84e-08!143;DOID:14566!8.26e-07!239;DOID:162!9.47e-07!235|ontology_enrichment_disease_v019=DOID:4960;3.17e-07;1!DOID:0070004;3.17e-07;1|ontology_enrichment_disease_v019_2=DOID:4960,2.82e-07,1;DOID:0070004,2.82e-07,1|ontology_enrichment_uberon=UBERON:0001007!1.12e-09!155;UBERON:0001555!1.12e-09!155;UBERON:0007026!1.12e-09!155;UBERON:0004119!4.53e-09!169;UBERON:0000925!4.53e-09!169;UBERON:0006595!4.53e-09!169;UBERON:0004921!3.83e-08!129;UBERON:0004185!3.83e-08!129;UBERON:0000077!1.17e-07!130;UBERON:0001041!1.60e-07!98|ontology_enrichment_uberon_v019=UBERON:0001829;5.78e-12;2!UBERON:0001831;8.23e-07;1!UBERON:0001736;8.23e-07;1!UBERON:0001301;8.23e-07;1!UBERON:0001567;8.23e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.57e-12,2;UBERON:0001301,4.25e-07,1;UBERON:0001736,7.15e-07,1;UBERON:0006298,7.15e-07,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,4.35556412763322,3.7766271146975,4.80135766013443,0,0,0,0,0,0,0.619737604642413,0.142169232487422,0,0,0,0,0,0,0.515151135268373,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,1.63841583378639,0,0.853460445133014,1.20118796110804,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,0,0,0.83593247695339,0,0,0,1.11410456885174,0.883817722424512,0.664601683750863,0.812411591295047,2.0494611156108,1.69077151827842,0.986627427622057,1.65810010671509,0.579606171470105,0,0,0,0.906474741580529,0,0,0.253019692019503,0.318565414324097,0,1.90090408889675,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.408308342509787,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.614942192715568,0,0.329250856225877,0,0.301586917234893,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.358234090811393,0.581267877027924,0.383382679165211,0,0.176096868026452,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,2.16386124460217,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0.638063562472921,0.10115778085555,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0,0.658589785919804,0,0,0.288666338176536,0,0,2.2594512186427,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0.743212700502875,0,0,0.318852545457645,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.500547425135725,0.19538809540204,0.278406173895242,0,0,0,0,1.12284324244932,0,0,0.557216921387392,0.284136146806413,0.71623345421307,0,0.921482106297696,0,0,0,0,0,0,0.276283915531148,0,0,1.10776324914963,0,0,1.25314822272926,0,0,0,0,0,0,0,0.5208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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:50467993..50468012,- | |||
|id=chr14:50467993..50468012,- | |||
|ontology_enrichment_celltype=CL:0000542!5.02e-11!53;CL:0000051!5.02e-11!53;CL:0000838!2.05e-10!52;CL:0000945!6.84e-08!24;CL:0000826!6.84e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.45e-14;24!CL:0002127;3.17e-07;1!CL:0000911;3.17e-07;1!CL:0000814;3.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.80e-14,24;CL:0000826,4.80e-14,24;CL:0000838,3.33e-09,52;CL:0000542,5.36e-09,53;CL:0000051,5.36e-09,53;CL:0002127,2.66e-07,1;CL:0000914,2.66e-07,1;CL:0000911,2.66e-07,1;CL:0000814,2.66e-07,1;CL:0002042,2.66e-07,1;CL:0002039,2.66e-07,1;CL:0002040,2.66e-07,1;CL:0002041,2.66e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.23e-07;1!UBERON:0008801;8.23e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.24e-13!106;DOID:299!1.46e-08!25;DOID:0050687!4.84e-08!143;DOID:14566!8.26e-07!239;DOID:162!9.47e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.17e-07;1!DOID:0070004;3.17e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.82e-07,1;DOID:0070004,2.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.12e-09!155;UBERON:0001555!1.12e-09!155;UBERON:0007026!1.12e-09!155;UBERON:0004119!4.53e-09!169;UBERON:0000925!4.53e-09!169;UBERON:0006595!4.53e-09!169;UBERON:0004921!3.83e-08!129;UBERON:0004185!3.83e-08!129;UBERON:0000077!1.17e-07!130;UBERON:0001041!1.60e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.78e-12;2!UBERON:0001831;8.23e-07;1!UBERON:0001736;8.23e-07;1!UBERON:0001301;8.23e-07;1!UBERON:0001567;8.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.57e-12,2;UBERON:0001301,4.25e-07,1;UBERON:0001736,7.15e-07,1;UBERON:0006298,7.15e-07,1 | |||
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| |||
|short_description=p@chr14:50467993..50468012,- | |||
}} |
Revision as of 04:37, 11 September 2013
Short description: | p@chr14:50467993..50468012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:50467993..50468012, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.80e-14 | 24 |
pro-B cell | 4.80e-14 | 24 |
lymphoid lineage restricted progenitor cell | 3.33e-09 | 52 |
lymphocyte | 5.36e-09 | 53 |
common lymphoid progenitor | 5.36e-09 | 53 |
innate effector T cell | 2.66e-07 | 1 |
immature NK T cell | 2.66e-07 | 1 |
effector T cell | 2.66e-07 | 1 |
mature NK T cell | 2.66e-07 | 1 |
immature NK T cell stage IV | 2.66e-07 | 1 |
immature NK T cell stage I | 2.66e-07 | 1 |
immature NK T cell stage II | 2.66e-07 | 1 |
immature NK T cell stage III | 2.66e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.57e-12 | 2 |
epididymis | 4.25e-07 | 1 |
submandibular gland | 7.15e-07 | 1 |
submandibular gland primordium | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.82e-07 | 1 |
myeloma | 2.82e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.