FFCP PHASE1:Hg19::chr14:50361279..50361293,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=382|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=659|TSSclassifier=S|UniProt=|association_with_transcript=144bp_to_BC030291_5end|description=CAGE_peak_8_at_ARF6_5end|id=chr14:50361279..50361293,+|ontology_enrichment_celltype=CL:0002057!3.15e-17!42;CL:0002009!4.90e-17!65;CL:0000738!8.57e-17!140;CL:0002031!2.47e-16!124;CL:0000860!2.59e-16!45;CL:0002194!2.93e-16!63;CL:0000576!2.93e-16!63;CL:0000040!2.93e-16!63;CL:0000559!2.93e-16!63;CL:0002087!3.09e-16!119;CL:0002032!9.35e-16!165;CL:0000837!9.35e-16!165;CL:0000557!2.15e-15!71;CL:0000839!4.85e-15!70;CL:0000766!6.00e-15!76;CL:0000037!2.31e-14!172;CL:0000566!2.31e-14!172;CL:0000988!1.53e-13!182;CL:0000063!2.15e-13!578;CL:0000763!2.54e-13!112;CL:0000049!2.54e-13!112;CL:0000134!6.86e-11!358;CL:0000219!7.74e-11!390;CL:0000548!4.52e-10!679;CL:0000004!4.52e-10!679;CL:0000255!4.52e-10!679;CL:0002320!5.07e-10!365;CL:0000003!6.19e-10!722;CL:0000012!1.23e-09!682|ontology_enrichment_celltype_v019=CL:0000860;3.59e-26;33!CL:0002057;3.59e-26;33!CL:0000473;4.96e-21;39!CL:0000234;4.96e-21;39!CL:0000576;3.29e-13;48!CL:0000766;4.58e-10;69!CL:0002087;2.04e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,7.04e-24,48;CL:0000234,7.04e-24,48;CL:0000860,1.10e-23,42;CL:0002057,1.10e-23,42;CL:0000738,2.30e-21,136;CL:0002009,3.61e-21,61;CL:0002031,7.31e-21,120;CL:0002087,2.44e-20,115;CL:0000557,5.85e-20,67;CL:0002194,7.15e-20,59;CL:0000576,7.15e-20,59;CL:0000040,7.15e-20,59;CL:0000559,7.15e-20,59;CL:0002032,7.37e-20,161;CL:0000837,7.37e-20,161;CL:0000839,3.21e-18,66;CL:0000037,4.76e-18,168;CL:0000766,6.90e-18,72;CL:0000988,2.73e-17,177;CL:0000763,6.68e-16,108;CL:0000049,6.68e-16,108;CL:0000134,5.38e-10,354;CL:0002320,2.90e-09,361;CL:0000219,1.90e-08,386|ontology_enrichment_development_v019=CL:0002057;1.15e-17;42|ontology_enrichment_disease=DOID:162!8.70e-10!235;DOID:14566!1.28e-09!239;DOID:0050687!1.05e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.54e-15!80;UBERON:0001474!1.36e-13!86;UBERON:0004765!4.19e-12!101;UBERON:0001434!4.19e-12!101;UBERON:0002384!1.33e-10!375;UBERON:0002390!4.55e-10!102;UBERON:0003061!4.55e-10!102;UBERON:0002405!5.70e-08!115;UBERON:0002193!7.77e-08!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-20,76;UBERON:0001474,5.55e-19,82;UBERON:0004765,6.52e-16,90;UBERON:0002405,7.69e-15,93;UBERON:0002390,7.92e-15,98;UBERON:0003061,7.92e-15,98;UBERON:0001434,2.48e-14,100;UBERON:0002193,4.60e-12,108;UBERON:0002384,5.25e-10,371|phase1_expression=2.18014055124668,1.71280419112787,1.26858963686374,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0,0.982935746006035,0.697801167972428,0,0,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.85870796139317,0.547497700291537,0.502170558379211,0.382067028739756,0.164201178899891,0.314843125254717,0.393364276848904,0.767658796194425,0.619264493264304,0,0.30120591877825,0,1.47187681102573,0.853015394924529,0,0,0.401088894940283,1.73608696572681,1.79132379391939,0,0.77272670290256,2.76256653681173,4.1566353805769,6.30718559088322,3.95129362739664,6.57868620834921,3.71647645074124,2.8769239232215,3.84241059793651,1.89185783910868,3.44745680736619,3.87290810150296,1.35426486594342,7.34145124216158,3.0019676506363,3.59557575112135,3.67300670845083,2.56743221660875,3.83602275479425,1.9791078011203,5.78444607102732,3.83602275479425,4.93355705668593,1.70215567407342,6.22822248995575,4.01997864410789,10.429658368404,3.04064382587163,3.63239701580021,2.94622108790052,1.58231193720442,0.633765858935825,0.850417199860174,0.838634582033504,0.561643155732475,0.901061357049038,0.32145117339416,1.99508920618874,0.99458338599545,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,2.27685187643779,1.17447437874188,2.6759125968766,0,0,0.526768169550154,0.590129310341499,0.393010762749165,1.23360899399706,0.501559486172034,0.32592226663359,0,1.94826728407911,0.779873198196215,1.47302953737419,0.221533894583621,1.08321545506006,3.84273959177025,3.64166173167659,3.94650971048823,3.31620021343018,1.15921234294021,0.889719378972363,0.267540828089713,2.09071047609954,0.339928028092699,0,0.68725489096526,2.02415753615602,0.637130828648193,0,0,0,0.639933055772092,0,0.236777252044017,0.821127996921047,1.00803371612366,0.267440195783507,1.30341963494519,0,0.670700859703636,0.255725123687061,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0.472674085820339,0.443458794925128,0.527008714158756,0.0654895377488563,0.364295288292542,0.741568885568859,0.97364218096405,0.348259474598534,0.797747763113191,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0.735326160691737,0.81014194788176,0.267899184852239,0.673588117878509,0.450445921933289,0,0,0.549605231791222,0,0,1.3082821564276,2.4848597584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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=382 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=659 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=144bp_to_BC030291_5end | |||
|description=CAGE_peak_8_at_ARF6_5end | |||
|id=chr14:50361279..50361293,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.15e-17!42;CL:0002009!4.90e-17!65;CL:0000738!8.57e-17!140;CL:0002031!2.47e-16!124;CL:0000860!2.59e-16!45;CL:0002194!2.93e-16!63;CL:0000576!2.93e-16!63;CL:0000040!2.93e-16!63;CL:0000559!2.93e-16!63;CL:0002087!3.09e-16!119;CL:0002032!9.35e-16!165;CL:0000837!9.35e-16!165;CL:0000557!2.15e-15!71;CL:0000839!4.85e-15!70;CL:0000766!6.00e-15!76;CL:0000037!2.31e-14!172;CL:0000566!2.31e-14!172;CL:0000988!1.53e-13!182;CL:0000063!2.15e-13!578;CL:0000763!2.54e-13!112;CL:0000049!2.54e-13!112;CL:0000134!6.86e-11!358;CL:0000219!7.74e-11!390;CL:0000548!4.52e-10!679;CL:0000004!4.52e-10!679;CL:0000255!4.52e-10!679;CL:0002320!5.07e-10!365;CL:0000003!6.19e-10!722;CL:0000012!1.23e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-26;33!CL:0002057;3.59e-26;33!CL:0000473;4.96e-21;39!CL:0000234;4.96e-21;39!CL:0000576;3.29e-13;48!CL:0000766;4.58e-10;69!CL:0002087;2.04e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.04e-24,48;CL:0000234,7.04e-24,48;CL:0000860,1.10e-23,42;CL:0002057,1.10e-23,42;CL:0000738,2.30e-21,136;CL:0002009,3.61e-21,61;CL:0002031,7.31e-21,120;CL:0002087,2.44e-20,115;CL:0000557,5.85e-20,67;CL:0002194,7.15e-20,59;CL:0000576,7.15e-20,59;CL:0000040,7.15e-20,59;CL:0000559,7.15e-20,59;CL:0002032,7.37e-20,161;CL:0000837,7.37e-20,161;CL:0000839,3.21e-18,66;CL:0000037,4.76e-18,168;CL:0000766,6.90e-18,72;CL:0000988,2.73e-17,177;CL:0000763,6.68e-16,108;CL:0000049,6.68e-16,108;CL:0000134,5.38e-10,354;CL:0002320,2.90e-09,361;CL:0000219,1.90e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-17;42 | |||
|ontology_enrichment_disease=DOID:162!8.70e-10!235;DOID:14566!1.28e-09!239;DOID:0050687!1.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.54e-15!80;UBERON:0001474!1.36e-13!86;UBERON:0004765!4.19e-12!101;UBERON:0001434!4.19e-12!101;UBERON:0002384!1.33e-10!375;UBERON:0002390!4.55e-10!102;UBERON:0003061!4.55e-10!102;UBERON:0002405!5.70e-08!115;UBERON:0002193!7.77e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-20,76;UBERON:0001474,5.55e-19,82;UBERON:0004765,6.52e-16,90;UBERON:0002405,7.69e-15,93;UBERON:0002390,7.92e-15,98;UBERON:0003061,7.92e-15,98;UBERON:0001434,2.48e-14,100;UBERON:0002193,4.60e-12,108;UBERON:0002384,5.25e-10,371 | |||
|phase1_expression=2.18014055124668,1.71280419112787,1.26858963686374,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0,0.982935746006035,0.697801167972428,0,0,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.85870796139317,0.547497700291537,0.502170558379211,0.382067028739756,0.164201178899891,0.314843125254717,0.393364276848904,0.767658796194425,0.619264493264304,0,0.30120591877825,0,1.47187681102573,0.853015394924529,0,0,0.401088894940283,1.73608696572681,1.79132379391939,0,0.77272670290256,2.76256653681173,4.1566353805769,6.30718559088322,3.95129362739664,6.57868620834921,3.71647645074124,2.8769239232215,3.84241059793651,1.89185783910868,3.44745680736619,3.87290810150296,1.35426486594342,7.34145124216158,3.0019676506363,3.59557575112135,3.67300670845083,2.56743221660875,3.83602275479425,1.9791078011203,5.78444607102732,3.83602275479425,4.93355705668593,1.70215567407342,6.22822248995575,4.01997864410789,10.429658368404,3.04064382587163,3.63239701580021,2.94622108790052,1.58231193720442,0.633765858935825,0.850417199860174,0.838634582033504,0.561643155732475,0.901061357049038,0.32145117339416,1.99508920618874,0.99458338599545,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0,0,2.27685187643779,1.17447437874188,2.6759125968766,0,0,0.526768169550154,0.590129310341499,0.393010762749165,1.23360899399706,0.501559486172034,0.32592226663359,0,1.94826728407911,0.779873198196215,1.47302953737419,0.221533894583621,1.08321545506006,3.84273959177025,3.64166173167659,3.94650971048823,3.31620021343018,1.15921234294021,0.889719378972363,0.267540828089713,2.09071047609954,0.339928028092699,0,0.68725489096526,2.02415753615602,0.637130828648193,0,0,0,0.639933055772092,0,0.236777252044017,0.821127996921047,1.00803371612366,0.267440195783507,1.30341963494519,0,0.670700859703636,0.255725123687061,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0.472674085820339,0.443458794925128,0.527008714158756,0.0654895377488563,0.364295288292542,0.741568885568859,0.97364218096405,0.348259474598534,0.797747763113191,1.43094374583205,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,0.735326160691737,0.81014194788176,0.267899184852239,0.673588117878509,0.450445921933289,0,0,0.549605231791222,0,0,1.3082821564276,2.48485975847659,0.886413581652058,0.529636723252875,0.573673241497627,1.77334191099179,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.653847612453835,0.151357427644931,0,0.70296429550139,0.624320153660641,0,0.149448680551801,0.117434498643765,1.13311061057692,0.561803226808994,0.61246251376468,1.35117749042945,0.309977343527296,0,0.494533858557114,0,0,0.841680569770331,1.00094815897571,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0.567160915800105,0.358779271377724,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0.257640540045629,0.18611685633159,0.843881661206331,1.07180705677318,0.252433774244115,0.644349290496095,0.323292113637624,0.710019185033229,0.503760491138201,0.339121184620975,0.386521706326594,0.818238361772504,0.286804595389004,0.487894824518382,0.265059536642971,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0.928735856063958,1.44375896333917,0.236613600079688,0,0,0.661763836394364,0.435758888184812,0.949082476444386,0.269662616320329,0.196221465125346,1.15424147083917,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,1.18157981336281,0.441463099414651,0.983907508344908,0,0.109750285408626,0,1.10581869652794,1.38882667737794,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0.702012795417713,0.297262324577456,0.93733833986777,0,0.283550194484773,0.806026704325635,0.581267877027924,1.15014803749563,0,1.05658120815871,0.207328115540772,1.29707958075265,0.37872730027914,0.317489471460845,0,0,0,0.514137463516618,1.20137223137567,0.571652865261156,0.112131084345361,0,0.22001485746285,0.775630294546667,0,0.845302752556,0.797814349754612,0,0.514414748524284,5.67396528093113,0.266422179016099,0.428933980974443,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0.904318131178758,0,1.49959486773086,2.43247561282381,1.50677127429638,4.21667878966063,1.91699884393266,0,0,0.723906533337896,0.410952645100767,0.179060963239896,1.79336230389644,1.57624608161542,2.58753089831421,2.56686072559497,0,0,0,0.335032530668698,0.637938751653163,2.24702107184155,2.99161459204025,0.828831026872071,0.49076596687656,0,0.542530047399471,0.623912584592421,0.535286966391485,0.630809660135739,0.702848489956279,0,0,0,0,0,0.434418072340414,0.195801157462741,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.744323423456331,0.61384789315225,0,0.640695746278505,1.02341449813341,2.0911009748669,1.48418066444991,0.771048469013278,0.710246901252508,0.574890092096664,0,0.11621037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| |||
|short_description=p8@ARF6 | |||
}} |
Revision as of 04:37, 11 September 2013
Short description: | p8@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 144bp_to_BC030291_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.04e-24 | 48 |
phagocyte | 7.04e-24 | 48 |
classical monocyte | 1.10e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.10e-23 | 42 |
leukocyte | 2.30e-21 | 136 |
macrophage dendritic cell progenitor | 3.61e-21 | 61 |
hematopoietic lineage restricted progenitor cell | 7.31e-21 | 120 |
nongranular leukocyte | 2.44e-20 | 115 |
granulocyte monocyte progenitor cell | 5.85e-20 | 67 |
monopoietic cell | 7.15e-20 | 59 |
monocyte | 7.15e-20 | 59 |
monoblast | 7.15e-20 | 59 |
promonocyte | 7.15e-20 | 59 |
hematopoietic oligopotent progenitor cell | 7.37e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.37e-20 | 161 |
myeloid lineage restricted progenitor cell | 3.21e-18 | 66 |
hematopoietic stem cell | 4.76e-18 | 168 |
myeloid leukocyte | 6.90e-18 | 72 |
hematopoietic cell | 2.73e-17 | 177 |
myeloid cell | 6.68e-16 | 108 |
common myeloid progenitor | 6.68e-16 | 108 |
mesenchymal cell | 5.38e-10 | 354 |
connective tissue cell | 2.90e-09 | 361 |
motile cell | 1.90e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-20 | 76 |
bone element | 5.55e-19 | 82 |
skeletal element | 6.52e-16 | 90 |
immune system | 7.69e-15 | 93 |
hematopoietic system | 7.92e-15 | 98 |
blood island | 7.92e-15 | 98 |
skeletal system | 2.48e-14 | 100 |
hemolymphoid system | 4.60e-12 | 108 |
connective tissue | 5.25e-10 | 371 |
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