FFCP PHASE1:Hg19::chr14:23835464..23835478,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C89|description=CAGE_peak_at_chr14:23835464..23835478,-|id=chr14:23835464..23835478,-|ontology_enrichment_celltype=CL:0000133!6.32e-09!59;CL:0000221!9.26e-08!71;CL:0002322!7.69e-07!5|ontology_enrichment_celltype_v019=CL:0002581;5.53e-10;1!CL:0002319;5.27e-08;25!CL:0000333;7.76e-08;5|ontology_enrichment_celltype_v019_2=CL:0002581,4.85e-10,1;CL:0002319,5.48e-08,25|ontology_enrichment_development_v019=UBERON:0003056;9.35e-13;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;8.96e-10;22!DOID:2994;8.96e-10;22!DOID:171;2.49e-08;10!DOID:3093;3.20e-07;11|ontology_enrichment_disease_v019_2=DOID:3095,7.64e-10,22;DOID:2994,7.64e-10,22;DOID:171,1.72e-08,10;DOID:3093,3.04e-07,11;DOID:169,9.15e-07,6|ontology_enrichment_uberon=UBERON:0000924!6.77e-17!173;UBERON:0006601!6.77e-17!173;UBERON:0004121!2.55e-16!169;UBERON:0000073!7.06e-16!94;UBERON:0001016!7.06e-16!94;UBERON:0005743!5.77e-14!86;UBERON:0002346!3.62e-13!90;UBERON:0000153!3.74e-13!129;UBERON:0007811!3.74e-13!129;UBERON:0003075!1.18e-12!86;UBERON:0007284!1.18e-12!86;UBERON:0000033!1.69e-12!123;UBERON:0003056!1.18e-11!61;UBERON:0001017!1.58e-11!82;UBERON:0002616!3.59e-10!59;UBERON:0000955!1.91e-09!69;UBERON:0006238!1.91e-09!69;UBERON:0000020!2.16e-09!23;UBERON:0001049!2.65e-09!57;UBERON:0005068!2.65e-09!57;UBERON:0006241!2.65e-09!57;UBERON:0007135!2.65e-09!57;UBERON:0001032!8.73e-09!24;UBERON:0004456!8.73e-09!24;UBERON:0000970!8.83e-09!20;UBERON:0002104!3.78e-08!21;UBERON:0000019!7.00e-08!19;UBERON:0000047!7.00e-08!19;UBERON:0004088!7.00e-08!19;UBERON:0003072!7.00e-08!19;UBERON:0003071!7.00e-08!19;UBERON:0004128!7.00e-08!19;UBERON:0001456!9.35e-07!21|ontology_enrichment_uberon_v019=UBERON:0002038;5.53e-10;1!UBERON:0009661;5.53e-10;1!UBERON:0002950;5.53e-10;1!UBERON:0001891;5.53e-10;1!UBERON:0000966;5.30e-08;5!UBERON:0005388;5.30e-08;5!UBERON:0001802;5.30e-08;5!UBERON:0000013;7.76e-08;5!UBERON:0002410;7.76e-08;5!UBERON:0000970;3.53e-07;20!UBERON:0002104;7.65e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.79e-10,1;UBERON:0009661,5.79e-10,1;UBERON:0002950,5.79e-10,1;UBERON:0001891,5.79e-10,1;UBERON:0009616,5.79e-10,1;UBERON:0010286,5.79e-10,1;UBERON:0000013,5.89e-08,5;UBERON:0002410,5.89e-08,5;UBERON:0000966,6.85e-07,6;UBERON:0005388,6.85e-07,6;UBERON:0001802,6.85e-07,6;UBERON:0000970,7.09e-07,21;UBERON:0002104,7.09e-07,21|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0.853815942907168,1.19276791489337,0.813357600086629,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0,0.157702415033935,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0.391602314925481,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0.153461973288062,0,0,0,0,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.551346289938122,0.322260734604821,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0.421258456238981,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,1.51789269506286,0.34993472024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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_at_chr14:23835464..23835478,- | |||
|id=chr14:23835464..23835478,- | |||
|ontology_enrichment_celltype=CL:0000133!6.32e-09!59;CL:0000221!9.26e-08!71;CL:0002322!7.69e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.53e-10;1!CL:0002319;5.27e-08;25!CL:0000333;7.76e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.85e-10,1;CL:0002319,5.48e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.35e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;8.96e-10;22!DOID:2994;8.96e-10;22!DOID:171;2.49e-08;10!DOID:3093;3.20e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.64e-10,22;DOID:2994,7.64e-10,22;DOID:171,1.72e-08,10;DOID:3093,3.04e-07,11;DOID:169,9.15e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000924!6.77e-17!173;UBERON:0006601!6.77e-17!173;UBERON:0004121!2.55e-16!169;UBERON:0000073!7.06e-16!94;UBERON:0001016!7.06e-16!94;UBERON:0005743!5.77e-14!86;UBERON:0002346!3.62e-13!90;UBERON:0000153!3.74e-13!129;UBERON:0007811!3.74e-13!129;UBERON:0003075!1.18e-12!86;UBERON:0007284!1.18e-12!86;UBERON:0000033!1.69e-12!123;UBERON:0003056!1.18e-11!61;UBERON:0001017!1.58e-11!82;UBERON:0002616!3.59e-10!59;UBERON:0000955!1.91e-09!69;UBERON:0006238!1.91e-09!69;UBERON:0000020!2.16e-09!23;UBERON:0001049!2.65e-09!57;UBERON:0005068!2.65e-09!57;UBERON:0006241!2.65e-09!57;UBERON:0007135!2.65e-09!57;UBERON:0001032!8.73e-09!24;UBERON:0004456!8.73e-09!24;UBERON:0000970!8.83e-09!20;UBERON:0002104!3.78e-08!21;UBERON:0000019!7.00e-08!19;UBERON:0000047!7.00e-08!19;UBERON:0004088!7.00e-08!19;UBERON:0003072!7.00e-08!19;UBERON:0003071!7.00e-08!19;UBERON:0004128!7.00e-08!19;UBERON:0001456!9.35e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.53e-10;1!UBERON:0009661;5.53e-10;1!UBERON:0002950;5.53e-10;1!UBERON:0001891;5.53e-10;1!UBERON:0000966;5.30e-08;5!UBERON:0005388;5.30e-08;5!UBERON:0001802;5.30e-08;5!UBERON:0000013;7.76e-08;5!UBERON:0002410;7.76e-08;5!UBERON:0000970;3.53e-07;20!UBERON:0002104;7.65e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.79e-10,1;UBERON:0009661,5.79e-10,1;UBERON:0002950,5.79e-10,1;UBERON:0001891,5.79e-10,1;UBERON:0009616,5.79e-10,1;UBERON:0010286,5.79e-10,1;UBERON:0000013,5.89e-08,5;UBERON:0002410,5.89e-08,5;UBERON:0000966,6.85e-07,6;UBERON:0005388,6.85e-07,6;UBERON:0001802,6.85e-07,6;UBERON:0000970,7.09e-07,21;UBERON:0002104,7.09e-07,21 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0,0,0.61560529038394,0,0.313454721478088,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0.853815942907168,1.19276791489337,0.813357600086629,0.725627385107593,0.756962552626885,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0.336393253036082,0,0.07333828582095,0,3.57656445851882,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0,0.157702415033935,0,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0.391602314925481,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0.153461973288062,0,0,0,0,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.551346289938122,0.322260734604821,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0.421258456238981,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,1.51789269506286,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0.307160702099232,0,0.422008249231538,0,0,1.05562704063997,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,1.37897349296586,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.697118721393016,0.230850775511391,0,0.23056390438806,0.807818799687949,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0.484945082442097,0,1.12990370390266,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,1.44677833618517,0.550157746388935,0.83088067605837,0,0,0.182248669974074,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0.573409195690071,0.554645257684261,0.18628920882415,3.04366996859708,0,0,0,0,1.87333962322753,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,1.53473245564382,0,0.629063767423586,0.764467467344097,1.69732529954025,0,0.247871528518004,1.67593475391973,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0,0,0.0981477185010256,0,0,0.462102664601353,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0,0.354809480650555,0,0,0.271878931907327,0,0,0,0.39246546425257,0,0,0.913158720509496,0,0,1.92986669276972,3.00225862292181,0,0.347716544605159,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0.701818390386317,0,0,0,13.7425645931786,0,0,0.437119121007915,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.128915775947154,0,0.178553938605658,0,0,0.730336388246517,0,1.43339583151451,0,0.271965960763659,0.872701380680755,0.5290268405154,0,0,0,0,1.09265571963696,3.4208595273088,0.305966489225945,0.534434810531121,0,0,0.151557396436479,0,0,0,0.63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| |||
|short_description=p@chr14:23835464..23835478,- | |||
}} |
Revision as of 03:59, 11 September 2013
Short description: | p@chr14:23835464..23835478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:23835464..23835478, - |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.85e-10 | 1 |
neural cell | 5.48e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 5.79e-10 | 1 |
midbrain nucleus | 5.79e-10 | 1 |
regional part of midbrain | 5.79e-10 | 1 |
midbrain | 5.79e-10 | 1 |
presumptive midbrain | 5.79e-10 | 1 |
midbrain neural tube | 5.79e-10 | 1 |
sympathetic nervous system | 5.89e-08 | 5 |
autonomic nervous system | 5.89e-08 | 5 |
retina | 6.85e-07 | 6 |
photoreceptor array | 6.85e-07 | 6 |
posterior segment of eyeball | 6.85e-07 | 6 |
eye | 7.09e-07 | 21 |
visual system | 7.09e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.64e-10 | 22 |
germ cell cancer | 7.64e-10 | 22 |
neuroectodermal tumor | 1.72e-08 | 10 |
nervous system cancer | 3.04e-07 | 11 |
neuroendocrine tumor | 9.15e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.