FFCP PHASE1:Hg19::chr13:114781050..114781058,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1378|description=CAGE_peak_at_chr13:114781050..114781058,-|id=chr13:114781050..114781058,-|ontology_enrichment_celltype=CL:0000136!1.90e-23!15;CL:0000325!1.88e-09!39;CL:0002617!1.93e-08!2;CL:1000415!1.78e-07!2|ontology_enrichment_celltype_v019=CL:0000136;2.31e-42;13!CL:0002521;1.26e-08;3!CL:0002567;1.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000136,8.32e-37,15;CL:0002567,1.04e-08,3;CL:0002521,1.21e-08,3|ontology_enrichment_development_v019=UBERON:0005062;8.02e-23;4!UBERON:0007284;8.02e-23;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.10e-18!9;UBERON:0003688!7.22e-10!6;UBERON:0002358!7.22e-10!6;UBERON:0003684!7.22e-10!6;UBERON:0001178!7.22e-10!6;UBERON:0001557!2.63e-08!19;UBERON:0002294!8.23e-08!7;UBERON:0001173!8.23e-08!7;UBERON:0004912!8.23e-08!7|ontology_enrichment_uberon_v019=UBERON:0003978;4.83e-30;3!UBERON:0000946;4.83e-30;3!UBERON:0002146;3.67e-23;1!UBERON:0002134;3.67e-23;1!UBERON:0005208;3.67e-23;1!UBERON:0005623;3.67e-23;1!UBERON:0004145;3.67e-23;1!UBERON:0005946;3.67e-23;1!UBERON:0005965;3.67e-23;1!UBERON:0002078;3.67e-23;1!UBERON:0002081;2.74e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0010313;9.65e-10;10!UBERON:0004151;1.26e-08;3!UBERON:0002190;1.26e-08;3!UBERON:0001013;2.85e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.54e-30,3;UBERON:0009751,7.54e-30,3;UBERON:0000946,7.54e-30,3;UBERON:0002523,7.54e-30,3;UBERON:0005983,7.54e-30,3;UBERON:0002165,7.54e-30,3;UBERON:0002062,7.54e-30,3;UBERON:0007280,7.54e-30,3;UBERON:0002134,4.10e-23,1;UBERON:0005208,4.10e-23,1;UBERON:0005946,4.10e-23,1;UBERON:0005965,4.10e-23,1;UBERON:0002078,4.10e-23,1;UBERON:0002146,6.40e-23,1;UBERON:0005623,6.40e-23,1;UBERON:0004797,2.04e-13,7;UBERON:0002081,2.90e-12,2;UBERON:0002133,2.90e-12,2;UBERON:0010227,2.90e-12,2;UBERON:0010313,1.10e-09,10;UBERON:0002342,1.10e-09,10;UBERON:0005062,1.10e-09,10;UBERON:0002190,1.21e-08,3;UBERON:0004151,1.30e-08,3;UBERON:0004145,1.30e-08,3;UBERON:0001013,2.85e-07,14|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.220587945464788,0,0.71181185733329,0.404493924480493,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,1.14580212005842,1.43574604915363,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,3.7603484103405,1.22538230705385,4.26234419922746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.381882949668989,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0|short_description=p@chr13:114781050..114781058,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1378 | |||
|description=CAGE_peak_at_chr13:114781050..114781058,- | |||
|id=chr13:114781050..114781058,- | |||
|ontology_enrichment_celltype=CL:0000136!1.90e-23!15;CL:0000325!1.88e-09!39;CL:0002617!1.93e-08!2;CL:1000415!1.78e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.31e-42;13!CL:0002521;1.26e-08;3!CL:0002567;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.32e-37,15;CL:0002567,1.04e-08,3;CL:0002521,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.02e-23;4!UBERON:0007284;8.02e-23;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-18!9;UBERON:0003688!7.22e-10!6;UBERON:0002358!7.22e-10!6;UBERON:0003684!7.22e-10!6;UBERON:0001178!7.22e-10!6;UBERON:0001557!2.63e-08!19;UBERON:0002294!8.23e-08!7;UBERON:0001173!8.23e-08!7;UBERON:0004912!8.23e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.83e-30;3!UBERON:0000946;4.83e-30;3!UBERON:0002146;3.67e-23;1!UBERON:0002134;3.67e-23;1!UBERON:0005208;3.67e-23;1!UBERON:0005623;3.67e-23;1!UBERON:0004145;3.67e-23;1!UBERON:0005946;3.67e-23;1!UBERON:0005965;3.67e-23;1!UBERON:0002078;3.67e-23;1!UBERON:0002081;2.74e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0010313;9.65e-10;10!UBERON:0004151;1.26e-08;3!UBERON:0002190;1.26e-08;3!UBERON:0001013;2.85e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.54e-30,3;UBERON:0009751,7.54e-30,3;UBERON:0000946,7.54e-30,3;UBERON:0002523,7.54e-30,3;UBERON:0005983,7.54e-30,3;UBERON:0002165,7.54e-30,3;UBERON:0002062,7.54e-30,3;UBERON:0007280,7.54e-30,3;UBERON:0002134,4.10e-23,1;UBERON:0005208,4.10e-23,1;UBERON:0005946,4.10e-23,1;UBERON:0005965,4.10e-23,1;UBERON:0002078,4.10e-23,1;UBERON:0002146,6.40e-23,1;UBERON:0005623,6.40e-23,1;UBERON:0004797,2.04e-13,7;UBERON:0002081,2.90e-12,2;UBERON:0002133,2.90e-12,2;UBERON:0010227,2.90e-12,2;UBERON:0010313,1.10e-09,10;UBERON:0002342,1.10e-09,10;UBERON:0005062,1.10e-09,10;UBERON:0002190,1.21e-08,3;UBERON:0004151,1.30e-08,3;UBERON:0004145,1.30e-08,3;UBERON:0001013,2.85e-07,14 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,1.56711376919903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.220587945464788,0,0.71181185733329,0.404493924480493,0.588664395376038,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,1.14580212005842,1.43574604915363,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,3.7603484103405,1.22538230705385,4.26234419922746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.381882949668989,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr13:114781050..114781058,- | |||
}} |
Revision as of 01:38, 11 September 2013
Short description: | p@chr13:114781050..114781058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:114781050..114781058, - |
Coexpression cluster: | C1378_Mesenchymal_mature_Adipocyte_testicular_choriocarcinoma_chorionic_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.32e-37 | 15 |
light melanocyte | 1.04e-08 | 3 |
subcutaneous fat cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 7.54e-30 | 3 |
cardiac mesenchyme | 7.54e-30 | 3 |
cardial valve | 7.54e-30 | 3 |
tunica intima | 7.54e-30 | 3 |
heart layer | 7.54e-30 | 3 |
endocardium | 7.54e-30 | 3 |
endocardial cushion | 7.54e-30 | 3 |
presumptive endocardium | 7.54e-30 | 3 |
tricuspid valve | 4.10e-23 | 1 |
right atrium valve | 4.10e-23 | 1 |
outflow tract of atrium | 4.10e-23 | 1 |
outflow part of right atrium | 4.10e-23 | 1 |
right cardiac atrium | 4.10e-23 | 1 |
pulmonary valve | 6.40e-23 | 1 |
semi-lunar valve | 6.40e-23 | 1 |
blood vessel layer | 2.04e-13 | 7 |
cardiac atrium | 2.90e-12 | 2 |
atrioventricular valve | 2.90e-12 | 2 |
future cardiac atrium | 2.90e-12 | 2 |
neural crest-derived structure | 1.10e-09 | 10 |
neural crest | 1.10e-09 | 10 |
neural fold | 1.10e-09 | 10 |
subcutaneous adipose tissue | 1.21e-08 | 3 |
cardiac chamber | 1.30e-08 | 3 |
outflow tract | 1.30e-08 | 3 |
adipose tissue | 2.85e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.