FFCP PHASE1:Hg19::chr13:111358396..111358407,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79587|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25695|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000539269_5end|description=CAGE_peak_3_at_CARS2_5end|id=chr13:111358396..111358407,-|ontology_enrichment_celltype=CL:0000055!4.57e-17!180;CL:0000548!9.97e-17!679;CL:0000004!9.97e-17!679;CL:0000255!9.97e-17!679;CL:0000012!7.63e-16!682;CL:0002321!2.94e-13!248;CL:0000220!7.23e-13!246;CL:0000144!4.15e-11!625;CL:0000003!8.67e-09!722;CL:0002371!5.24e-08!591;CL:0000057!1.07e-07!75;CL:0000183!2.05e-07!59;CL:0000680!3.49e-07!57;CL:0000056!3.49e-07!57;CL:0000355!3.49e-07!57;CL:0000393!9.88e-07!60;CL:0000211!9.88e-07!60|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002321,4.43e-10,250|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.61e-08!239;DOID:162!1.29e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000486!9.43e-10!82;UBERON:0000914!2.02e-08!83;UBERON:0002329!2.02e-08!83;UBERON:0003077!2.02e-08!83;UBERON:0003059!2.02e-08!83;UBERON:0007282!2.02e-08!83;UBERON:0009618!2.02e-08!83;UBERON:0007285!2.02e-08!83;UBERON:0004290!5.63e-08!70|ontology_enrichment_uberon_v019=UBERON:0001737;4.08e-07;9!UBERON:0001557;4.08e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.48e-09,83;UBERON:0007503,1.09e-08,78;UBERON:0002329,2.32e-08,71;UBERON:0003059,2.32e-08,71;UBERON:0007282,2.32e-08,71;UBERON:0004290,2.32e-08,71;UBERON:0009618,2.32e-08,71;UBERON:0003077,4.14e-08,72;UBERON:0007285,4.14e-08,72;UBERON:0007524,7.25e-08,73;UBERON:0001737,7.80e-08,9|phase1_expression=0.726713517082227,0.856402095563933,1.12763523276777,1.0007329835313,0.446961094427288,0,0,1.89515962028049,0.261185628199839,1.72013755551056,2.09340350391728,0.873765488520689,0.527533956456907,0.990130823680373,1.65698687863958,0,1.80808358407193,1.46062018077475,0.487932798790507,2.33930010345897,1.42800483870977,0.940364164434263,1.14494394852423,1.09499540058307,0.251085279189606,0.152826811495903,0,0.236132343941038,0,0,0.309632246632152,0.919421224478927,0,0.739508020333575,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0.895661896959697,0.647787332037959,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0.736555271975129,0,0.211255286311942,0.850417199860174,0.419317291016752,0.112328631146495,0,0.48217676009124,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,1.70162670895322,2.21729397462564,1.58102614247627,0.130979075497713,2.18577172975525,1.48313777113772,1.29818957461873,0.522389211897802,1.19662164466979,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0.735326160691737,0.81014194788176,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0,0,0,1.74437620857014,0.993943903390637,0.25326102332916,1.98613771219828,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,1.55605517699883,0.404132016209064,0.326923806226917,1.96764655938411,1.15235184896,0.468642863667593,1.24864030732128,1.71141546463335,2.83952493048422,0.822041490506354,1.61872944368132,1.54495887372473,1.02077085627447,0.245668634623536,0.516628905878827,0,1.23633464639278,3.64064544775211,2.15585442544872,0.841680569770331,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,1.65261864797256,0.794025282120147,1.61450672119976,1.2813443329114,1.27159140695737,3.60109315301283,0.824420233907511,1.28820270022815,0.37223371266318,0.843881661206331,1.26668106709558,1.7670364197088,0.920498986422993,0.323292113637624,0,1.61203357164224,0.339121184620975,0.966304265816484,0.545492241181669,1.43402297694502,1.21973706129595,0.927708378250397,0.580969714347592,1.0366105501537,1.00928340350251,1.82488679537915,0,2.57296375277154,2.76269842704961,0.928735856063958,1.44375896333917,1.77460200059766,0.842923450390509,2.6511213287183,3.19852520923942,1.96091499683166,2.37270619111097,2.42696354688296,1.76599318612811,2.30848294167834,0,1.40241773803446,0,0,0,0,0,0,0.860919069801795,1.54411029268673,0.878002283269004,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.927443239800615,0.234817388471643,0.433099343283221,0,0,0,0,0.246217006087397,0.936017060556951,1.18904929830983,0,0.335964256397719,0.708875486211932,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0,4.37311228946907,4.3596006883328,2.27348686044945,1.03417372606222,0,0.8453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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79587 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25695 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539269_5end | |||
|description=CAGE_peak_3_at_CARS2_5end | |||
|id=chr13:111358396..111358407,- | |||
|ontology_enrichment_celltype=CL:0000055!4.57e-17!180;CL:0000548!9.97e-17!679;CL:0000004!9.97e-17!679;CL:0000255!9.97e-17!679;CL:0000012!7.63e-16!682;CL:0002321!2.94e-13!248;CL:0000220!7.23e-13!246;CL:0000144!4.15e-11!625;CL:0000003!8.67e-09!722;CL:0002371!5.24e-08!591;CL:0000057!1.07e-07!75;CL:0000183!2.05e-07!59;CL:0000680!3.49e-07!57;CL:0000056!3.49e-07!57;CL:0000355!3.49e-07!57;CL:0000393!9.88e-07!60;CL:0000211!9.88e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.43e-10,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.61e-08!239;DOID:162!1.29e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!9.43e-10!82;UBERON:0000914!2.02e-08!83;UBERON:0002329!2.02e-08!83;UBERON:0003077!2.02e-08!83;UBERON:0003059!2.02e-08!83;UBERON:0007282!2.02e-08!83;UBERON:0009618!2.02e-08!83;UBERON:0007285!2.02e-08!83;UBERON:0004290!5.63e-08!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.08e-07;9!UBERON:0001557;4.08e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.48e-09,83;UBERON:0007503,1.09e-08,78;UBERON:0002329,2.32e-08,71;UBERON:0003059,2.32e-08,71;UBERON:0007282,2.32e-08,71;UBERON:0004290,2.32e-08,71;UBERON:0009618,2.32e-08,71;UBERON:0003077,4.14e-08,72;UBERON:0007285,4.14e-08,72;UBERON:0007524,7.25e-08,73;UBERON:0001737,7.80e-08,9 | |||
|phase1_expression=0.726713517082227,0.856402095563933,1.12763523276777,1.0007329835313,0.446961094427288,0,0,1.89515962028049,0.261185628199839,1.72013755551056,2.09340350391728,0.873765488520689,0.527533956456907,0.990130823680373,1.65698687863958,0,1.80808358407193,1.46062018077475,0.487932798790507,2.33930010345897,1.42800483870977,0.940364164434263,1.14494394852423,1.09499540058307,0.251085279189606,0.152826811495903,0,0.236132343941038,0,0,0.309632246632152,0.919421224478927,0,0.739508020333575,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0.895661896959697,0.647787332037959,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0.736555271975129,0,0.211255286311942,0.850417199860174,0.419317291016752,0.112328631146495,0,0.48217676009124,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,1.30361867064741,0,0.486634870302636,1.70162670895322,2.21729397462564,1.58102614247627,0.130979075497713,2.18577172975525,1.48313777113772,1.29818957461873,0.522389211897802,1.19662164466979,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0.735326160691737,0.81014194788176,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0,0,0,1.74437620857014,0.993943903390637,0.25326102332916,1.98613771219828,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,1.55605517699883,0.404132016209064,0.326923806226917,1.96764655938411,1.15235184896,0.468642863667593,1.24864030732128,1.71141546463335,2.83952493048422,0.822041490506354,1.61872944368132,1.54495887372473,1.02077085627447,0.245668634623536,0.516628905878827,0,1.23633464639278,3.64064544775211,2.15585442544872,0.841680569770331,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,1.65261864797256,0.794025282120147,1.61450672119976,1.2813443329114,1.27159140695737,3.60109315301283,0.824420233907511,1.28820270022815,0.37223371266318,0.843881661206331,1.26668106709558,1.7670364197088,0.920498986422993,0.323292113637624,0,1.61203357164224,0.339121184620975,0.966304265816484,0.545492241181669,1.43402297694502,1.21973706129595,0.927708378250397,0.580969714347592,1.0366105501537,1.00928340350251,1.82488679537915,0,2.57296375277154,2.76269842704961,0.928735856063958,1.44375896333917,1.77460200059766,0.842923450390509,2.6511213287183,3.19852520923942,1.96091499683166,2.37270619111097,2.42696354688296,1.76599318612811,2.30848294167834,0,1.40241773803446,0,0,0,0,0,0,0.860919069801795,1.54411029268673,0.878002283269004,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.927443239800615,0.234817388471643,0.433099343283221,0,0,0,0,0.246217006087397,0.936017060556951,1.18904929830983,0,0.335964256397719,0.708875486211932,0.0895585227028483,0,0.766765358330422,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0,4.37311228946907,4.3596006883328,2.27348686044945,1.03417372606222,0,0.845302752556,1.32969058292435,0,1.02882949704857,1.41849132023278,1.5985330740966,0.285955987316295,0,0.823240336780769,0.977208552881205,0,0,3.01439377059586,2.61460037580088,2.29937879718731,0,0,0,1.19812427745791,5.7430967917057,0,0.723906533337896,2.05476322550383,2.32779252211864,0.112085143993527,0,0.215627574859517,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0.36807447515742,0,0.813795071099207,0.623912584592421,1.24900292158013,0.788512075169673,0.819989904948992,0.902838299183157,2.27407504055985,2.0694614258501,0,1.10621501125022,1.39013783148933,1.76221041716467,1.02943027143257,0,0.431428401637234,0.213455115606889,0.303127571446259,0,0,0.744323423456331,0.153461973288062,1.12264037773229,1.40953064181271,2.04682899626681,0.965123526861645,0,0.771048469013278,1.06537035187876,0.9033987161519,0,1.16210378459959,0.604297247958111,0.802025881213139,0.184161977871793,0.803701137152247,0,1.57349297951309,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0.680374821106063,0.431831832204279,0,0.812839312631559,2.00675909541941,1.27438136522519,1.66215201785745,1.34324852833307,0.219259876645935,0.261435451024901,0,0,0.976135183992909,0,1.37354197227515,0.990113999047056,0.574265537996172,1.95018073810956,1.6068392984416,0.386682873168488,1.23238893691716,1.38153307253517,1.92971201478343,1.6113036730241,0.580066775656914,1.61930592090592,0.623224249527161,0.495854746082934,0.576570202095319,1.02090169995667,0.910420027699949,0,0.94443704049192,1.3940745403212,0,1.06461206063404,0.869932992075073,0.37064843820784,1.43124886741991,7.44316738719335,1.58189712359363,2.66882271493355,2.55897791311334,0,0.318203247925937,2.3548459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| |||
|short_description=p3@CARS2 | |||
}} |
Revision as of 01:30, 11 September 2013
Short description: | p3@CARS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CARS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539269_5end |
EntrezGene: | CARS2 |
HGNC: | 25695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.43e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.48e-09 | 83 |
epithelial vesicle | 1.09e-08 | 78 |
somite | 2.32e-08 | 71 |
presomitic mesoderm | 2.32e-08 | 71 |
presumptive segmental plate | 2.32e-08 | 71 |
dermomyotome | 2.32e-08 | 71 |
trunk paraxial mesoderm | 2.32e-08 | 71 |
paraxial mesoderm | 4.14e-08 | 72 |
presumptive paraxial mesoderm | 4.14e-08 | 72 |
dense mesenchyme tissue | 7.25e-08 | 73 |
larynx | 7.80e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.