FFCP PHASE1:Hg19::chr13:111156118..111156132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1284|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=2203|TSSclassifier=W|UniProt=P08572|association_with_transcript=-427bp_to_J02760_5end|coexpression_cluster_id=C69|description=CAGE_peak_9_at_COL4A2_5end|id=chr13:111156118..111156132,+|ontology_enrichment_celltype=CL:0002057!2.99e-21!42;CL:0000860!1.87e-19!45;CL:0000763!3.30e-16!112;CL:0000049!3.30e-16!112;CL:0002194!1.74e-13!63;CL:0000576!1.74e-13!63;CL:0000040!1.74e-13!63;CL:0000559!1.74e-13!63;CL:0002009!6.63e-13!65;CL:0000839!1.33e-11!70;CL:0000557!2.30e-11!71;CL:0000766!2.85e-10!76;CL:0002032!4.51e-10!165;CL:0000837!4.51e-10!165;CL:0000037!2.55e-09!172;CL:0000566!2.55e-09!172;CL:0000988!4.71e-09!182;CL:0000219!2.22e-08!390;CL:0002320!2.89e-08!365;CL:0000134!4.12e-08!358|ontology_enrichment_celltype_v019=CL:0000860;4.14e-26;33!CL:0002057;4.14e-26;33!CL:0000473;2.23e-16;39!CL:0000234;2.23e-16;39!CL:0000576;4.01e-13;48!CL:0000766;3.52e-08;69!CL:0000763;7.07e-08;100|ontology_enrichment_celltype_v019_2=CL:0000763,3.58e-22,108;CL:0000049,3.58e-22,108;CL:0000860,1.30e-21,42;CL:0002057,1.30e-21,42;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000473,8.72e-19,48;CL:0000234,8.72e-19,48;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0002194,8.00e-15,59;CL:0000576,8.00e-15,59;CL:0000040,8.00e-15,59;CL:0000559,8.00e-15,59;CL:0002009,2.60e-14,61;CL:0000839,3.65e-13,66;CL:0000557,5.90e-13,67;CL:0000766,5.39e-12,72;CL:0002087,6.86e-11,115;CL:0002031,2.23e-10,120;CL:0000738,5.44e-09,136;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361|ontology_enrichment_development_v019=CL:0002057;1.69e-18;42!CL:0000049;2.18e-08;108|ontology_enrichment_disease=DOID:8692!2.52e-08!31;DOID:1036!3.20e-08!8;DOID:1240!1.78e-07!39;DOID:2531!2.84e-07!51;DOID:0060083!2.84e-07!51|ontology_enrichment_disease_v019=DOID:1240;1.60e-13;39!DOID:8692;2.39e-12;31!DOID:2531;7.33e-09;51!DOID:0060083;7.33e-09;51|ontology_enrichment_disease_v019_2=DOID:1240,5.57e-14,39;DOID:2531,8.50e-14,51;DOID:0060083,8.50e-14,51;DOID:8692,4.67e-13,31|ontology_enrichment_uberon=UBERON:0002371!1.69e-09!80;UBERON:0003124!5.70e-09!7;UBERON:0002384!7.48e-09!375;UBERON:0001474!1.76e-08!86;UBERON:0005631!5.23e-08!14;UBERON:0000158!5.23e-08!14;UBERON:0002390!4.22e-07!102;UBERON:0003061!4.22e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-11,76;UBERON:0001474,2.03e-10,82;UBERON:0004765,2.09e-09,90;UBERON:0002405,4.53e-09,93;UBERON:0002390,1.48e-08,98;UBERON:0003061,1.48e-08,98;UBERON:0001434,2.30e-08,100;UBERON:0002193,1.14e-07,108;UBERON:0002384,4.69e-07,371|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,2.05583944010913,0,0,2.0492856522328,0.945928919554341,0,3.22742341791913,0,0,1.36453075028923,0.224723484445085,0.306083892370903,2.56743221660875,0.639337125799041,0.659702600373432,1.39624560335142,0,0.290209238628584,1.13477044938228,0,0.251248665256743,3.12889751052121,0.434377689410233,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,1.14117339516596,0.313359791546046,0,0,1.2847046008296,1.00899853595524,0,0,0,0,0,1.75849285861836,0,0,0,0,0,0,0,0,21.1742430127209,0,0,0.296964680832639,0,0,0,0,119.482808814401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,1.41282230755522,0,0.225595660617181,0.392125068635479,1.00692952185506,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@COL4A2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2203 | |||
|TSSclassifier=W | |||
|UniProt=P08572 | |||
|association_with_transcript=-427bp_to_J02760_5end | |||
|coexpression_cluster_id=C69 | |||
|description=CAGE_peak_9_at_COL4A2_5end | |||
|id=chr13:111156118..111156132,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.99e-21!42;CL:0000860!1.87e-19!45;CL:0000763!3.30e-16!112;CL:0000049!3.30e-16!112;CL:0002194!1.74e-13!63;CL:0000576!1.74e-13!63;CL:0000040!1.74e-13!63;CL:0000559!1.74e-13!63;CL:0002009!6.63e-13!65;CL:0000839!1.33e-11!70;CL:0000557!2.30e-11!71;CL:0000766!2.85e-10!76;CL:0002032!4.51e-10!165;CL:0000837!4.51e-10!165;CL:0000037!2.55e-09!172;CL:0000566!2.55e-09!172;CL:0000988!4.71e-09!182;CL:0000219!2.22e-08!390;CL:0002320!2.89e-08!365;CL:0000134!4.12e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.14e-26;33!CL:0002057;4.14e-26;33!CL:0000473;2.23e-16;39!CL:0000234;2.23e-16;39!CL:0000576;4.01e-13;48!CL:0000766;3.52e-08;69!CL:0000763;7.07e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.58e-22,108;CL:0000049,3.58e-22,108;CL:0000860,1.30e-21,42;CL:0002057,1.30e-21,42;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000473,8.72e-19,48;CL:0000234,8.72e-19,48;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0002194,8.00e-15,59;CL:0000576,8.00e-15,59;CL:0000040,8.00e-15,59;CL:0000559,8.00e-15,59;CL:0002009,2.60e-14,61;CL:0000839,3.65e-13,66;CL:0000557,5.90e-13,67;CL:0000766,5.39e-12,72;CL:0002087,6.86e-11,115;CL:0002031,2.23e-10,120;CL:0000738,5.44e-09,136;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-18;42!CL:0000049;2.18e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!2.52e-08!31;DOID:1036!3.20e-08!8;DOID:1240!1.78e-07!39;DOID:2531!2.84e-07!51;DOID:0060083!2.84e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.60e-13;39!DOID:8692;2.39e-12;31!DOID:2531;7.33e-09;51!DOID:0060083;7.33e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.57e-14,39;DOID:2531,8.50e-14,51;DOID:0060083,8.50e-14,51;DOID:8692,4.67e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.69e-09!80;UBERON:0003124!5.70e-09!7;UBERON:0002384!7.48e-09!375;UBERON:0001474!1.76e-08!86;UBERON:0005631!5.23e-08!14;UBERON:0000158!5.23e-08!14;UBERON:0002390!4.22e-07!102;UBERON:0003061!4.22e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-11,76;UBERON:0001474,2.03e-10,82;UBERON:0004765,2.09e-09,90;UBERON:0002405,4.53e-09,93;UBERON:0002390,1.48e-08,98;UBERON:0003061,1.48e-08,98;UBERON:0001434,2.30e-08,100;UBERON:0002193,1.14e-07,108;UBERON:0002384,4.69e-07,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,2.05583944010913,0,0,2.0492856522328,0.945928919554341,0,3.22742341791913,0,0,1.36453075028923,0.224723484445085,0.306083892370903,2.56743221660875,0.639337125799041,0.659702600373432,1.39624560335142,0,0.290209238628584,1.13477044938228,0,0.251248665256743,3.12889751052121,0.434377689410233,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,1.14117339516596,0.313359791546046,0,0,1.2847046008296,1.00899853595524,0,0,0,0,0,1.75849285861836,0,0,0,0,0,0,0,0,21.1742430127209,0,0,0.296964680832639,0,0,0,0,119.482808814401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,1.41282230755522,0,0.225595660617181,0.392125068635479,1.00692952185506,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@COL4A2 | |||
}} |
Revision as of 01:29, 11 September 2013
Short description: | p9@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_COL4A2_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | -427bp_to_J02760_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | P08572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.58e-22 | 108 |
common myeloid progenitor | 3.58e-22 | 108 |
classical monocyte | 1.30e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-21 | 42 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
defensive cell | 8.72e-19 | 48 |
phagocyte | 8.72e-19 | 48 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
monopoietic cell | 8.00e-15 | 59 |
monocyte | 8.00e-15 | 59 |
monoblast | 8.00e-15 | 59 |
promonocyte | 8.00e-15 | 59 |
macrophage dendritic cell progenitor | 2.60e-14 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-13 | 66 |
granulocyte monocyte progenitor cell | 5.90e-13 | 67 |
myeloid leukocyte | 5.39e-12 | 72 |
nongranular leukocyte | 6.86e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.23e-10 | 120 |
leukocyte | 5.44e-09 | 136 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.58e-11 | 76 |
bone element | 2.03e-10 | 82 |
skeletal element | 2.09e-09 | 90 |
immune system | 4.53e-09 | 93 |
hematopoietic system | 1.48e-08 | 98 |
blood island | 1.48e-08 | 98 |
skeletal system | 2.30e-08 | 100 |
hemolymphoid system | 1.14e-07 | 108 |
connective tissue | 4.69e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.57e-14 | 39 |
hematologic cancer | 8.50e-14 | 51 |
immune system cancer | 8.50e-14 | 51 |
myeloid leukemia | 4.67e-13 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.