FFCP PHASE1:Hg19::chr13:76056112..76056160,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9882|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19165|TSSclassifier=S|UniProt=O60343|association_with_transcript=89bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end|description=CAGE_peak_6_at_TBC1D4_5end|id=chr13:76056112..76056160,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002543;3.04e-09;6|ontology_enrichment_celltype_v019_2=CL:0002543,5.70e-10,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.16e-13!115;UBERON:0000955!1.13e-09!69;UBERON:0006238!1.13e-09!69;UBERON:0000477!1.55e-08!286;UBERON:0001017!2.68e-08!82;UBERON:0001049!2.99e-08!57;UBERON:0005068!2.99e-08!57;UBERON:0006241!2.99e-08!57;UBERON:0007135!2.99e-08!57;UBERON:0000468!5.66e-08!659;UBERON:0002616!1.09e-07!59;UBERON:0005743!1.80e-07!86;UBERON:0003080!3.98e-07!42;UBERON:0000467!6.01e-07!625;UBERON:0000073!8.52e-07!94;UBERON:0001016!8.52e-07!94;UBERON:0000480!8.75e-07!626;UBERON:0000922!9.33e-07!612|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.64e-07,114|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,1.02000345622126,0,0.286235987131057,0.410623275218653,0.125542639594803,0.229240217243854,0.492603536699674,0.236132343941038,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.443458794925128,0.527008714158756,0.589405839739707,0,0,0,0.174129737299267,0,1.90792499444274,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.835979866147242,1.03366703667732,1.06729878806013,0,0,0.760272105718513,0.488124115096339,1.10298924103761,0,1.96459402224975,1.34717623575702,2.36484109014977,1.53316637465883,1.89853131913626,2.01521918323448,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0.822041490506354,0.323745888736263,1.54495887372473,0.61246251376468,0.737005903870608,0.413303124703062,0,0,0,0.718618141816238,0.841680569770331,0.500474079487857,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0,0.300091096084402,0.412210116953756,0,0.558350568994769,0.675105328965065,0.584622030967192,1.00973509697646,0.184099797284599,0,0.355009592516614,0.503760491138201,0,0.193260853163297,0.545492241181669,0,0.975789649036763,0.530119073285941,0.929551542956147,0.310983165046111,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0,0,0.828147600278907,0.505754070234305,1.20505514941741,0.661763836394364,0.217879444092406,1.18635309555548,0.539325232640658,0.588664395376038,0.769494313892781,1.4763109092493,0,0,0,0,0,1.18157981336281,0,0.737930631258681,0.171567810298526,0.658501712451753,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.761016608938393,0,0,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0.268675568108545,0.581267877027924,0.383382679165211,3.94130590316755,2.20121085033065,0.621984346622316,0.288239906833923,0.37872730027914,0.444485260045183,0.381988425558278,1.17217447210047,0,0.616964956219941,0.300343057843917,0,0.448524337381443,0,0.80672114403045,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.514414748524284,4.25547396069835,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,1.42636905040718,1.44781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.657017248110473,0,0.348631135379878,1.81289174387433,0.200506470303285,0.460404944679482,0,0.364182336013434,0,0,0.308061348417659,0,0,0.211103257785751,0,1.02056223165909,0.647747748306418,4.62681758070868,1.35473218771926,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0.3280146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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |||
|TSSclassifier=S | |||
|UniProt=O60343 | |||
|association_with_transcript=89bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end | |||
|description=CAGE_peak_6_at_TBC1D4_5end | |||
|id=chr13:76056112..76056160,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002543;3.04e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,5.70e-10,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-13!115;UBERON:0000955!1.13e-09!69;UBERON:0006238!1.13e-09!69;UBERON:0000477!1.55e-08!286;UBERON:0001017!2.68e-08!82;UBERON:0001049!2.99e-08!57;UBERON:0005068!2.99e-08!57;UBERON:0006241!2.99e-08!57;UBERON:0007135!2.99e-08!57;UBERON:0000468!5.66e-08!659;UBERON:0002616!1.09e-07!59;UBERON:0005743!1.80e-07!86;UBERON:0003080!3.98e-07!42;UBERON:0000467!6.01e-07!625;UBERON:0000073!8.52e-07!94;UBERON:0001016!8.52e-07!94;UBERON:0000480!8.75e-07!626;UBERON:0000922!9.33e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.64e-07,114 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,1.02000345622126,0,0.286235987131057,0.410623275218653,0.125542639594803,0.229240217243854,0.492603536699674,0.236132343941038,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.189069634328136,0.443458794925128,0.527008714158756,0.589405839739707,0,0,0,0.174129737299267,0,1.90792499444274,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.550236083880135,0.835979866147242,1.03366703667732,1.06729878806013,0,0,0.760272105718513,0.488124115096339,1.10298924103761,0,1.96459402224975,1.34717623575702,2.36484109014977,1.53316637465883,1.89853131913626,2.01521918323448,0,0,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0.311211035399766,0.134710672069688,0.163461903113459,0.605429710579726,0.576175924479999,0.234321431833797,0.624320153660641,0,0.298897361103602,0.822041490506354,0.323745888736263,1.54495887372473,0.61246251376468,0.737005903870608,0.413303124703062,0,0,0,0.718618141816238,0.841680569770331,0.500474079487857,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0,0.300091096084402,0.412210116953756,0,0.558350568994769,0.675105328965065,0.584622030967192,1.00973509697646,0.184099797284599,0,0.355009592516614,0.503760491138201,0,0.193260853163297,0.545492241181669,0,0.975789649036763,0.530119073285941,0.929551542956147,0.310983165046111,1.00928340350251,0.36497735907583,0,0.643240938192885,0,0,0,0.828147600278907,0.505754070234305,1.20505514941741,0.661763836394364,0.217879444092406,1.18635309555548,0.539325232640658,0.588664395376038,0.769494313892781,1.4763109092493,0,0,0,0,0,1.18157981336281,0,0.737930631258681,0.171567810298526,0.658501712451753,0,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.761016608938393,0,0,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0.268675568108545,0.581267877027924,0.383382679165211,3.94130590316755,2.20121085033065,0.621984346622316,0.288239906833923,0.37872730027914,0.444485260045183,0.381988425558278,1.17217447210047,0,0.616964956219941,0.300343057843917,0,0.448524337381443,0,0.80672114403045,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.514414748524284,4.25547396069835,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,1.2162378064119,0,0,0.239624855491583,0,1.42636905040718,1.44781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,0.347534457872331,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.657017248110473,0,0.348631135379878,1.81289174387433,0.200506470303285,0.460404944679482,0,0.364182336013434,0,0,0.308061348417659,0,0,0.211103257785751,0,1.02056223165909,0.647747748306418,4.62681758070868,1.35473218771926,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0,0.618246069886334,0.732555718546747,1.15513299888823,0,0.650060246036521,0,0.48335359146061,0.462145851343933,0.307007349452259,0.413509717453592,0.751941714077915,0.580066775656914,0.767039646744908,0.178064071293475,0.495854746082934,0,1.02090169995667,0.10115778085555,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,1.02359116524534,0.42793898803392,0,0.78494864019923,0.359744915166629,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0.92947049429925,0,0.717056761020258,0.294747123039363,0,0,0.422215270595328,0.658589785919804,0.75894634753143,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,2.01976898167023,0.213425530045242,0.478278818186467,2.19537308576098,0.191505370132367,0,0.324621940274555,0.842391534340376,0,0.47003968731907,5.01268954180134,0.169291777801603,0.321176150207399,0,0,1.03051603426729,0,0,0,1.56310476321632,0.278406173895242,0,0.270455678475983,3.66379164797602,4.22961015263549,0.561421621224659,0.73254089635947,0.121360521749513,0,0.852408440419239,0,0,0,0.994147647766298,0.844016498463076,1.224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| |||
|short_description=p6@TBC1D4 | |||
}} |
Revision as of 02:46, 11 September 2013
Short description: | p6@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TBC1D4_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000377625, ENST00000377636, ENST00000425511, ENST00000431480, NM_014832, uc001vjl.1, uc010aer.2, uc010aes.2_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | O60343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 5.70e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.64e-07 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.