FFCP PHASE1:Hg19::chr13:49227664..49227675,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1621|description=CAGE_peak_at_chr13:49227664..49227675,-|id=chr13:49227664..49227675,-|ontology_enrichment_celltype=CL:0000738!7.68e-47!140;CL:0002057!8.80e-44!42;CL:0000037!6.39e-42!172;CL:0000566!6.39e-42!172;CL:0002031!8.89e-41!124;CL:0000860!4.58e-40!45;CL:0002087!6.65e-39!119;CL:0002032!1.22e-38!165;CL:0000837!1.22e-38!165;CL:0000988!2.28e-38!182;CL:0000766!6.03e-35!76;CL:0000557!1.12e-31!71;CL:0000839!6.09e-29!70;CL:0002009!1.45e-28!65;CL:0000763!1.92e-27!112;CL:0000049!1.92e-27!112;CL:0002194!1.84e-26!63;CL:0000576!1.84e-26!63;CL:0000040!1.84e-26!63;CL:0000559!1.84e-26!63;CL:0000791!6.96e-19!18;CL:0000789!6.96e-19!18;CL:0002420!6.96e-19!18;CL:0002419!6.96e-19!18;CL:0000790!6.96e-19!18;CL:0002393!1.87e-13!9;CL:0002397!1.87e-13!9;CL:0000084!2.20e-12!25;CL:0000827!2.20e-12!25;CL:0000134!1.12e-11!358;CL:0000624!3.04e-11!6;CL:0000625!4.42e-11!11;CL:0002320!4.69e-11!365;CL:0000838!2.17e-10!52;CL:0000542!4.43e-10!53;CL:0000051!4.43e-10!53;CL:0000219!7.64e-10!390;CL:0000767!3.99e-07!3;CL:0000875!6.17e-07!3;CL:0002396!6.17e-07!3;CL:0000034!6.66e-07!444;CL:0000623!8.48e-07!3;CL:0000825!8.48e-07!3|ontology_enrichment_celltype_v019=CL:0000576;2.98e-28;48!CL:0000860;8.88e-26;33!CL:0002057;8.88e-26;33!CL:0000766;2.15e-20;69!CL:0000473;2.76e-19;39!CL:0000234;2.76e-19;39!CL:0002393;8.91e-15;6!CL:0002397;8.91e-15;6!CL:0000624;1.25e-14;6!CL:0000791;1.43e-13;18!CL:0000789;1.43e-13;18!CL:0002419;1.43e-13;18!CL:0002087;4.41e-13;104!CL:0000767;3.44e-12;3!CL:0000875;8.01e-12;3!CL:0002396;8.01e-12;3!CL:0000623;1.36e-11;3!CL:0000084;2.63e-09;25!CL:0000738;1.04e-08;136!CL:0000763;8.47e-08;100!CL:0000988;1.36e-07;177!CL:0000094;1.36e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,5.35e-48,42;CL:0002057,5.35e-48,42;CL:0000738,2.54e-42,136;CL:0002087,1.27e-41,115;CL:0000473,3.92e-41,48;CL:0000234,3.92e-41,48;CL:0000766,3.36e-37,72;CL:0002031,3.17e-35,120;CL:0002194,3.67e-34,59;CL:0000576,3.67e-34,59;CL:0000040,3.67e-34,59;CL:0000559,3.67e-34,59;CL:0000037,4.64e-34,168;CL:0002009,7.87e-33,61;CL:0000988,8.83e-32,177;CL:0002032,1.32e-30,161;CL:0000837,1.32e-30,161;CL:0000839,7.48e-30,66;CL:0000557,2.61e-29,67;CL:0002393,1.06e-24,9;CL:0002397,1.06e-24,9;CL:0000763,2.90e-22,108;CL:0000049,2.90e-22,108;CL:0000624,1.62e-14,6;CL:0000791,1.13e-13,18;CL:0000789,1.13e-13,18;CL:0002420,1.13e-13,18;CL:0002419,1.13e-13,18;CL:0000790,1.13e-13,18;CL:0000767,3.45e-12,3;CL:0000875,7.89e-12,3;CL:0002396,7.89e-12,3;CL:0000623,1.44e-11,3;CL:0000825,1.44e-11,3;CL:0000134,1.69e-10,354;CL:0002320,4.33e-10,361;CL:0000084,2.24e-09,25;CL:0000827,2.24e-09,25;CL:0000219,1.18e-08,386;CL:0000838,3.47e-08,52;CL:0000034,4.36e-08,441;CL:0000542,5.58e-08,53;CL:0000051,5.58e-08,53;CL:0000094,1.34e-07,8;CL:0000048,6.50e-07,427|ontology_enrichment_development_v019=CL:0002057;5.64e-34;42!CL:0000790;1.43e-13;18!CL:0000049;6.61e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.85e-30!80;UBERON:0002390!7.35e-29!102;UBERON:0003061!7.35e-29!102;UBERON:0001474!7.21e-27!86;UBERON:0002193!4.54e-26!112;UBERON:0004765!6.40e-21!101;UBERON:0001434!6.40e-21!101;UBERON:0002405!6.05e-20!115;UBERON:0002384!3.24e-10!375;UBERON:0002204!5.73e-08!167;UBERON:0003081!1.85e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.69e-27,76;UBERON:0002390,6.61e-27,98;UBERON:0003061,6.61e-27,98;UBERON:0001474,8.45e-25,82;UBERON:0002193,1.09e-23,108;UBERON:0002405,5.84e-23,93;UBERON:0004765,5.49e-22,90;UBERON:0001434,4.20e-19,100;UBERON:0002384,1.56e-09,371;UBERON:0003081,4.83e-09,203;UBERON:0002204,8.73e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1421351025744,11.1310525448192,11.7660253720218,0,0,0,0,0,4.69760702935756,0,1.80490002723128,5.4252717678963,0,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0,0,1.85823822537062,0,0.256160706529101,1.89185783910868,2.41321976515633,1.93645405075148,1.35426486594342,1.12945403725563,0.272906150057846,1.12361742222542,0.918251677112708,0.962787081228281,2.55734850319616,0,1.39624560335142,3.83602275479425,0.580418477257168,0,0,2.00998932205395,1.0429658368404,3.47502151528187,0.605399502633369,0.736555271975129,2.21523671208619,10.1402537429732,5.52771179909113,8.17668717482666,3.48218756554135,3.90459921387916,3.85741408072992,11.6855224933912,4.37616689837998,10.7771850721134,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,2.64342657158052,1.12101712596307,1.05353633910031,5.11445402295966,3.14408610199332,8.01845846098086,0,1.30368906653436,1.4203434172042,1.94826728407911,0.334231370655521,0.883817722424512,1.55073726208535,2.97884250141517,0,0.130059347559878,0,0.276350017785848,0.289803085735052,11.4180653634787,9.36392898313996,7.31748666634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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1621 | |||
|description=CAGE_peak_at_chr13:49227664..49227675,- | |||
|id=chr13:49227664..49227675,- | |||
|ontology_enrichment_celltype=CL:0000738!7.68e-47!140;CL:0002057!8.80e-44!42;CL:0000037!6.39e-42!172;CL:0000566!6.39e-42!172;CL:0002031!8.89e-41!124;CL:0000860!4.58e-40!45;CL:0002087!6.65e-39!119;CL:0002032!1.22e-38!165;CL:0000837!1.22e-38!165;CL:0000988!2.28e-38!182;CL:0000766!6.03e-35!76;CL:0000557!1.12e-31!71;CL:0000839!6.09e-29!70;CL:0002009!1.45e-28!65;CL:0000763!1.92e-27!112;CL:0000049!1.92e-27!112;CL:0002194!1.84e-26!63;CL:0000576!1.84e-26!63;CL:0000040!1.84e-26!63;CL:0000559!1.84e-26!63;CL:0000791!6.96e-19!18;CL:0000789!6.96e-19!18;CL:0002420!6.96e-19!18;CL:0002419!6.96e-19!18;CL:0000790!6.96e-19!18;CL:0002393!1.87e-13!9;CL:0002397!1.87e-13!9;CL:0000084!2.20e-12!25;CL:0000827!2.20e-12!25;CL:0000134!1.12e-11!358;CL:0000624!3.04e-11!6;CL:0000625!4.42e-11!11;CL:0002320!4.69e-11!365;CL:0000838!2.17e-10!52;CL:0000542!4.43e-10!53;CL:0000051!4.43e-10!53;CL:0000219!7.64e-10!390;CL:0000767!3.99e-07!3;CL:0000875!6.17e-07!3;CL:0002396!6.17e-07!3;CL:0000034!6.66e-07!444;CL:0000623!8.48e-07!3;CL:0000825!8.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.98e-28;48!CL:0000860;8.88e-26;33!CL:0002057;8.88e-26;33!CL:0000766;2.15e-20;69!CL:0000473;2.76e-19;39!CL:0000234;2.76e-19;39!CL:0002393;8.91e-15;6!CL:0002397;8.91e-15;6!CL:0000624;1.25e-14;6!CL:0000791;1.43e-13;18!CL:0000789;1.43e-13;18!CL:0002419;1.43e-13;18!CL:0002087;4.41e-13;104!CL:0000767;3.44e-12;3!CL:0000875;8.01e-12;3!CL:0002396;8.01e-12;3!CL:0000623;1.36e-11;3!CL:0000084;2.63e-09;25!CL:0000738;1.04e-08;136!CL:0000763;8.47e-08;100!CL:0000988;1.36e-07;177!CL:0000094;1.36e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.35e-48,42;CL:0002057,5.35e-48,42;CL:0000738,2.54e-42,136;CL:0002087,1.27e-41,115;CL:0000473,3.92e-41,48;CL:0000234,3.92e-41,48;CL:0000766,3.36e-37,72;CL:0002031,3.17e-35,120;CL:0002194,3.67e-34,59;CL:0000576,3.67e-34,59;CL:0000040,3.67e-34,59;CL:0000559,3.67e-34,59;CL:0000037,4.64e-34,168;CL:0002009,7.87e-33,61;CL:0000988,8.83e-32,177;CL:0002032,1.32e-30,161;CL:0000837,1.32e-30,161;CL:0000839,7.48e-30,66;CL:0000557,2.61e-29,67;CL:0002393,1.06e-24,9;CL:0002397,1.06e-24,9;CL:0000763,2.90e-22,108;CL:0000049,2.90e-22,108;CL:0000624,1.62e-14,6;CL:0000791,1.13e-13,18;CL:0000789,1.13e-13,18;CL:0002420,1.13e-13,18;CL:0002419,1.13e-13,18;CL:0000790,1.13e-13,18;CL:0000767,3.45e-12,3;CL:0000875,7.89e-12,3;CL:0002396,7.89e-12,3;CL:0000623,1.44e-11,3;CL:0000825,1.44e-11,3;CL:0000134,1.69e-10,354;CL:0002320,4.33e-10,361;CL:0000084,2.24e-09,25;CL:0000827,2.24e-09,25;CL:0000219,1.18e-08,386;CL:0000838,3.47e-08,52;CL:0000034,4.36e-08,441;CL:0000542,5.58e-08,53;CL:0000051,5.58e-08,53;CL:0000094,1.34e-07,8;CL:0000048,6.50e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;5.64e-34;42!CL:0000790;1.43e-13;18!CL:0000049;6.61e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.85e-30!80;UBERON:0002390!7.35e-29!102;UBERON:0003061!7.35e-29!102;UBERON:0001474!7.21e-27!86;UBERON:0002193!4.54e-26!112;UBERON:0004765!6.40e-21!101;UBERON:0001434!6.40e-21!101;UBERON:0002405!6.05e-20!115;UBERON:0002384!3.24e-10!375;UBERON:0002204!5.73e-08!167;UBERON:0003081!1.85e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.69e-27,76;UBERON:0002390,6.61e-27,98;UBERON:0003061,6.61e-27,98;UBERON:0001474,8.45e-25,82;UBERON:0002193,1.09e-23,108;UBERON:0002405,5.84e-23,93;UBERON:0004765,5.49e-22,90;UBERON:0001434,4.20e-19,100;UBERON:0002384,1.56e-09,371;UBERON:0003081,4.83e-09,203;UBERON:0002204,8.73e-09,167 | |||
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|short_description=p@chr13:49227664..49227675,- | |||
}} |
Revision as of 02:29, 11 September 2013
Short description: | p@chr13:49227664..49227675, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49227664..49227675, - |
Coexpression cluster: | C1621_Basophils_CD14CD16_CD14_CD4_CD34_Natural_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.69e-27 | 76 |
hematopoietic system | 6.61e-27 | 98 |
blood island | 6.61e-27 | 98 |
bone element | 8.45e-25 | 82 |
hemolymphoid system | 1.09e-23 | 108 |
immune system | 5.84e-23 | 93 |
skeletal element | 5.49e-22 | 90 |
skeletal system | 4.20e-19 | 100 |
connective tissue | 1.56e-09 | 371 |
lateral plate mesoderm | 4.83e-09 | 203 |
musculoskeletal system | 8.73e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.