FFCP PHASE1:Hg19::chr13:46961859..46961883,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80183|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20420|TSSclassifier=W|UniProt=Q9H714|association_with_transcript=-224bp_to_ENST00000378781,ENST00000378797,ENST00000429979,NM_025113,uc001vbe.3,uc001vbf.3,uc001vbg.3,uc010acl.2,uc010acm.2,uc010acn.2,uc010tfz.1_5end|coexpression_cluster_id=C498|description=CAGE_peak_5_at_KIAA0226L_5end|id=chr13:46961859..46961883,-|ontology_enrichment_celltype=CL:0000738!3.82e-29!140;CL:0000945!6.86e-29!24;CL:0000826!6.86e-29!24;CL:0000236!1.70e-25!14;CL:0000037!6.23e-22!172;CL:0000566!6.23e-22!172;CL:0002087!4.27e-20!119;CL:0000988!6.99e-20!182;CL:0002032!5.76e-17!165;CL:0000837!5.76e-17!165;CL:0002031!1.56e-15!124;CL:0000094!3.71e-13!8;CL:0000542!1.50e-12!53;CL:0000051!1.50e-12!53;CL:0000838!1.85e-11!52;CL:0000766!6.68e-11!76;CL:0002057!2.04e-09!42;CL:0000081!3.43e-09!11;CL:0000860!1.65e-08!45;CL:0000775!5.71e-08!3;CL:0000784!1.48e-07!3;CL:0002009!5.84e-07!65|ontology_enrichment_celltype_v019=CL:0000236;2.72e-70;13!CL:0000945;2.79e-58;24!CL:0000542;1.03e-21;53!CL:0000094;3.27e-21;8!CL:0000775;4.80e-21;3!CL:0000784;7.40e-20;3!CL:0000081;2.24e-15;11!CL:0000771;9.01e-15;2!CL:0000738;9.19e-09;136!CL:0000785;4.50e-08;1!CL:0000819;4.50e-08;1!CL:0002087;4.76e-07;104|ontology_enrichment_celltype_v019_2=CL:0000236,3.35e-65,14;CL:0000945,2.58e-58,24;CL:0000826,2.58e-58,24;CL:0000738,2.28e-32,136;CL:0000542,2.38e-28,53;CL:0000051,2.38e-28,53;CL:0000838,2.60e-25,52;CL:0000037,2.68e-25,168;CL:0000988,9.13e-24,177;CL:0000094,3.08e-21,8;CL:0000775,4.35e-21,3;CL:0002032,1.63e-20,161;CL:0000837,1.63e-20,161;CL:0000784,7.90e-20,3;CL:0002087,2.77e-18,115;CL:0002031,1.86e-15,120;CL:0000081,2.14e-15,11;CL:0000771,9.02e-15,2;CL:0000134,2.40e-09,354;CL:0002320,4.61e-09,361;CL:0000819,4.35e-08,1;CL:0000219,4.58e-08,386;CL:0000034,3.19e-07,441;CL:0000048,7.65e-07,427|ontology_enrichment_development_v019=CL:0000051;1.03e-21;53!UBERON:0001045;1.59e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;4.30e-16;10!DOID:0060073;4.50e-08;1!DOID:8675;4.50e-08;1!DOID:12603;8.51e-08;1|ontology_enrichment_disease_v019_2=DOID:0060058,4.66e-16,10;DOID:0060073,4.35e-08,1;DOID:8675,4.35e-08,1;DOID:12603,7.97e-08,1|ontology_enrichment_uberon=UBERON:0002390!5.80e-12!102;UBERON:0003061!5.80e-12!102;UBERON:0002193!4.69e-11!112;UBERON:0002371!5.00e-07!80|ontology_enrichment_uberon_v019=UBERON:0001154;1.59e-07;1!UBERON:0001153;1.59e-07;1!UBERON:0009854;1.59e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-08,371;UBERON:0001154,1.44e-07,1;UBERON:0001153,1.44e-07,1;UBERON:0001045,1.44e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,8.44392486325288,2.55904618477359,0,0.553995408531877,1.60435557976113,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,3.27683166757279,5.33705552318133,2.98711155796555,4.00395987036012,4.59801951963587,5.2883589822789,5.72432252721218,6.26134266020393,9.39579502993502,9.17455747500549,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,4.57595928624102,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7291475028908,5.9832291840805,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,0.822724546172388,0,0.540031437238115,0,0,0,0,3.34445715226294,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,1.65770349318689,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,6.93328199019531,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.899895566206002,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.227336094654718,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.875576689189638,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466|short_description=p5@KIAA0226L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20420 | |||
|TSSclassifier=W | |||
|UniProt=Q9H714 | |||
|association_with_transcript=-224bp_to_ENST00000378781,ENST00000378797,ENST00000429979,NM_025113,uc001vbe.3,uc001vbf.3,uc001vbg.3,uc010acl.2,uc010acm.2,uc010acn.2,uc010tfz.1_5end | |||
|coexpression_cluster_id=C498 | |||
|description=CAGE_peak_5_at_KIAA0226L_5end | |||
|id=chr13:46961859..46961883,- | |||
|ontology_enrichment_celltype=CL:0000738!3.82e-29!140;CL:0000945!6.86e-29!24;CL:0000826!6.86e-29!24;CL:0000236!1.70e-25!14;CL:0000037!6.23e-22!172;CL:0000566!6.23e-22!172;CL:0002087!4.27e-20!119;CL:0000988!6.99e-20!182;CL:0002032!5.76e-17!165;CL:0000837!5.76e-17!165;CL:0002031!1.56e-15!124;CL:0000094!3.71e-13!8;CL:0000542!1.50e-12!53;CL:0000051!1.50e-12!53;CL:0000838!1.85e-11!52;CL:0000766!6.68e-11!76;CL:0002057!2.04e-09!42;CL:0000081!3.43e-09!11;CL:0000860!1.65e-08!45;CL:0000775!5.71e-08!3;CL:0000784!1.48e-07!3;CL:0002009!5.84e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.72e-70;13!CL:0000945;2.79e-58;24!CL:0000542;1.03e-21;53!CL:0000094;3.27e-21;8!CL:0000775;4.80e-21;3!CL:0000784;7.40e-20;3!CL:0000081;2.24e-15;11!CL:0000771;9.01e-15;2!CL:0000738;9.19e-09;136!CL:0000785;4.50e-08;1!CL:0000819;4.50e-08;1!CL:0002087;4.76e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.35e-65,14;CL:0000945,2.58e-58,24;CL:0000826,2.58e-58,24;CL:0000738,2.28e-32,136;CL:0000542,2.38e-28,53;CL:0000051,2.38e-28,53;CL:0000838,2.60e-25,52;CL:0000037,2.68e-25,168;CL:0000988,9.13e-24,177;CL:0000094,3.08e-21,8;CL:0000775,4.35e-21,3;CL:0002032,1.63e-20,161;CL:0000837,1.63e-20,161;CL:0000784,7.90e-20,3;CL:0002087,2.77e-18,115;CL:0002031,1.86e-15,120;CL:0000081,2.14e-15,11;CL:0000771,9.02e-15,2;CL:0000134,2.40e-09,354;CL:0002320,4.61e-09,361;CL:0000819,4.35e-08,1;CL:0000219,4.58e-08,386;CL:0000034,3.19e-07,441;CL:0000048,7.65e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;1.03e-21;53!UBERON:0001045;1.59e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.30e-16;10!DOID:0060073;4.50e-08;1!DOID:8675;4.50e-08;1!DOID:12603;8.51e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.66e-16,10;DOID:0060073,4.35e-08,1;DOID:8675,4.35e-08,1;DOID:12603,7.97e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.80e-12!102;UBERON:0003061!5.80e-12!102;UBERON:0002193!4.69e-11!112;UBERON:0002371!5.00e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.59e-07;1!UBERON:0001153;1.59e-07;1!UBERON:0009854;1.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.12e-08,371;UBERON:0001154,1.44e-07,1;UBERON:0001153,1.44e-07,1;UBERON:0001045,1.44e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,8.44392486325288,2.55904618477359,0,0.553995408531877,1.60435557976113,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,1.75996244461323,3.27683166757279,5.33705552318133,2.98711155796555,4.00395987036012,4.59801951963587,5.2883589822789,5.72432252721218,6.26134266020393,9.39579502993502,9.17455747500549,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,2.14641561874808,4.57595928624102,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,23.2668158488995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7291475028908,5.9832291840805,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,0.822724546172388,0,0.540031437238115,0,0,0,0,3.34445715226294,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,1.65770349318689,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,6.93328199019531,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.899895566206002,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.227336094654718,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.875576689189638,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p5@KIAA0226L | |||
}} |
Revision as of 02:25, 11 September 2013
Short description: | p5@KIAA0226L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_KIAA0226L_5end |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | -224bp_to_ENST00000378781, ENST00000378797, ENST00000429979, NM_025113, uc001vbe.3, uc001vbf.3, uc001vbg.3, uc010acl.2, uc010acm.2, uc010acn.2, uc010tfz.1_5end |
EntrezGene: | KIAA0226L |
HGNC: | 20420 |
UniProt: | Q9H714 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.35e-65 | 14 |
lymphocyte of B lineage | 2.58e-58 | 24 |
pro-B cell | 2.58e-58 | 24 |
leukocyte | 2.28e-32 | 136 |
lymphocyte | 2.38e-28 | 53 |
common lymphoid progenitor | 2.38e-28 | 53 |
lymphoid lineage restricted progenitor cell | 2.60e-25 | 52 |
hematopoietic stem cell | 2.68e-25 | 168 |
hematopoietic cell | 9.13e-24 | 177 |
granulocyte | 3.08e-21 | 8 |
neutrophil | 4.35e-21 | 3 |
hematopoietic oligopotent progenitor cell | 1.63e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-20 | 161 |
plasmacytoid dendritic cell | 7.90e-20 | 3 |
nongranular leukocyte | 2.77e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.86e-15 | 120 |
blood cell | 2.14e-15 | 11 |
eosinophil | 9.02e-15 | 2 |
mesenchymal cell | 2.40e-09 | 354 |
connective tissue cell | 4.61e-09 | 361 |
B-1 B cell | 4.35e-08 | 1 |
motile cell | 4.58e-08 | 386 |
stem cell | 3.19e-07 | 441 |
multi fate stem cell | 7.65e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.12e-08 | 371 |
vermiform appendix | 1.44e-07 | 1 |
caecum | 1.44e-07 | 1 |
midgut | 1.44e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.66e-16 | 10 |
lymphatic system cancer | 4.35e-08 | 1 |
lymphosarcoma | 4.35e-08 | 1 |
acute leukemia | 7.97e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.