FFCP PHASE1:Hg19::chr13:46701318..46701335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3936|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=6528|TSSclassifier=S|UniProt=|association_with_transcript=-86bp_to_BC015001_5end|coexpression_cluster_id=C13|description=CAGE_peak_4_at_LCP1_5end|id=chr13:46701318..46701335,-|ontology_enrichment_celltype=CL:0000037!4.63e-79!172;CL:0000566!4.63e-79!172;CL:0002032!7.99e-76!165;CL:0000837!7.99e-76!165;CL:0000988!1.29e-75!182;CL:0000738!1.14e-72!140;CL:0002031!1.06e-59!124;CL:0002087!1.75e-59!119;CL:0000763!1.65e-50!112;CL:0000049!1.65e-50!112;CL:0000766!4.17e-42!76;CL:0000557!1.79e-38!71;CL:0002009!8.99e-37!65;CL:0000839!6.59e-36!70;CL:0002194!4.03e-35!63;CL:0000576!4.03e-35!63;CL:0000040!4.03e-35!63;CL:0000559!4.03e-35!63;CL:0002057!9.47e-34!42;CL:0000860!3.74e-30!45;CL:0000542!6.76e-21!53;CL:0000051!6.76e-21!53;CL:0000838!2.69e-20!52;CL:0000134!2.36e-16!358;CL:0002320!4.02e-15!365;CL:0000219!9.39e-13!390;CL:0000084!6.50e-11!25;CL:0000827!6.50e-11!25;CL:0000945!4.89e-09!24;CL:0000826!4.89e-09!24;CL:0000990!2.36e-08!8;CL:0002393!1.24e-07!9;CL:0002397!1.24e-07!9;CL:0000451!1.87e-07!10;CL:0000034!3.96e-07!444;CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18;CL:0000048!6.09e-07!430|ontology_enrichment_celltype_v019=CL:0000860;7.85e-36;33!CL:0002057;7.85e-36;33!CL:0000473;1.99e-35;39!CL:0000234;1.99e-35;39!CL:0000576;7.25e-26;48!CL:0000766;9.60e-26;69!CL:0000738;3.00e-19;136!CL:0002087;1.32e-18;104!CL:0000763;1.42e-16;100!CL:0000988;8.73e-16;177!CL:0000990;7.47e-10;8!CL:0000542;7.26e-09;53!CL:0000219;1.65e-08;193!CL:0000084;2.41e-08;25!CL:0000235;3.22e-08;6!CL:0000453;5.13e-08;5!CL:0000945;5.67e-08;24!CL:0000451;1.10e-07;10!CL:0000094;1.29e-07;8|ontology_enrichment_celltype_v019_2=CL:0000738,3.43e-84,136;CL:0000037,1.62e-83,168;CL:0000988,4.27e-82,177;CL:0002032,1.92e-81,161;CL:0000837,1.92e-81,161;CL:0002031,1.35e-67,120;CL:0002087,1.66e-66,115;CL:0000763,8.41e-62,108;CL:0000049,8.41e-62,108;CL:0000766,4.66e-59,72;CL:0000473,2.06e-54,48;CL:0000234,2.06e-54,48;CL:0000557,1.09e-53,67;CL:0002009,6.65e-51,61;CL:0000839,3.61e-50,66;CL:0002194,1.83e-48,59;CL:0000576,1.83e-48,59;CL:0000040,1.83e-48,59;CL:0000559,1.83e-48,59;CL:0000860,1.98e-47,42;CL:0002057,1.98e-47,42;CL:0000134,5.32e-23,354;CL:0002320,6.86e-22,361;CL:0000219,1.32e-18,386;CL:0000542,1.39e-16,53;CL:0000051,1.39e-16,53;CL:0000838,7.71e-16,52;CL:0000048,2.12e-13,427;CL:0000723,8.90e-13,433;CL:0000034,1.92e-12,441;CL:0000990,6.41e-10,8;CL:0002393,6.81e-09,9;CL:0002397,6.81e-09,9;CL:0000235,3.49e-08,6;CL:0000084,3.91e-08,25;CL:0000827,3.91e-08,25;CL:0000453,5.48e-08,5;CL:0000945,5.93e-08,24;CL:0000826,5.93e-08,24;CL:0000451,9.76e-08,10;CL:0000094,1.39e-07,8|ontology_enrichment_development_v019=CL:0002057;9.48e-34;42!CL:0000049;6.05e-16;108!CL:0000051;7.26e-09;53|ontology_enrichment_disease=DOID:2531!9.66e-16!51;DOID:0060083!9.66e-16!51;DOID:1240!1.53e-11!39;DOID:8692!1.06e-07!31;DOID:0060058!2.83e-07!10|ontology_enrichment_disease_v019=DOID:2531;4.39e-07;51!DOID:0060083;4.39e-07;51!DOID:0060058;6.04e-07;10|ontology_enrichment_disease_v019_2=DOID:2531,2.11e-10,51;DOID:0060083,2.11e-10,51;DOID:0060058,4.78e-07,10|ontology_enrichment_uberon=UBERON:0002390!2.29e-46!102;UBERON:0003061!2.29e-46!102;UBERON:0002193!2.76e-41!112;UBERON:0002371!2.52e-33!80;UBERON:0001474!4.51e-29!86;UBERON:0002405!6.21e-24!115;UBERON:0004765!7.46e-21!101;UBERON:0001434!7.46e-21!101;UBERON:0002384!6.42e-14!375;UBERON:0000178!3.39e-10!15;UBERON:0000179!3.39e-10!15;UBERON:0000463!3.39e-10!15;UBERON:0003081!7.93e-10!216|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-14;15!UBERON:0000179;2.28e-14;15!UBERON:0000463;2.28e-14;15!UBERON:0002390;1.71e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.23e-63,98;UBERON:0003061,6.23e-63,98;UBERON:0002193,1.78e-56,108;UBERON:0002371,1.89e-46,76;UBERON:0002405,5.97e-43,93;UBERON:0001474,1.46e-41,82;UBERON:0004765,4.43e-36,90;UBERON:0001434,1.71e-30,100;UBERON:0002384,5.82e-21,371;UBERON:0003081,7.89e-20,203;UBERON:0000178,2.48e-14,15;UBERON:0000179,2.48e-14,15;UBERON:0000463,2.48e-14,15;UBERON:0002204,1.32e-11,167;UBERON:0000926,1.49e-07,315;UBERON:0004120,1.49e-07,315;UBERON:0006603,1.49e-07,315|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6214633989652,7.30695246104517,7.39881344348585,1.18009283054671,1.53531759238885,1.70297735647684,0,0,0,0.697204805222715,1.56386155736164,0.587200878669695,0.553995408531877,7.01905566145496,2.38711957787437,0.895661896959697,0.32389366601898,1.80302897343931,4.36194716338694,2.26725566213286,1.69808842831471,6.97287110717054,2.87817521615278,2.47765096716083,8.34307937734236,4.86705342405291,8.27687804610048,9.99762474136194,7.74581620300591,9.47985406160392,6.21199720490596,6.5497476013883,6.96642801779762,9.48860066349798,3.53021929783703,3.83602275479425,1.9791078011203,3.59034583718937,1.70489900213078,14.2202526928006,5.10646702222026,8.09668923694247,10.0499466102697,5.7363121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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6528 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-86bp_to_BC015001_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_LCP1_5end | |||
|id=chr13:46701318..46701335,- | |||
|ontology_enrichment_celltype=CL:0000037!4.63e-79!172;CL:0000566!4.63e-79!172;CL:0002032!7.99e-76!165;CL:0000837!7.99e-76!165;CL:0000988!1.29e-75!182;CL:0000738!1.14e-72!140;CL:0002031!1.06e-59!124;CL:0002087!1.75e-59!119;CL:0000763!1.65e-50!112;CL:0000049!1.65e-50!112;CL:0000766!4.17e-42!76;CL:0000557!1.79e-38!71;CL:0002009!8.99e-37!65;CL:0000839!6.59e-36!70;CL:0002194!4.03e-35!63;CL:0000576!4.03e-35!63;CL:0000040!4.03e-35!63;CL:0000559!4.03e-35!63;CL:0002057!9.47e-34!42;CL:0000860!3.74e-30!45;CL:0000542!6.76e-21!53;CL:0000051!6.76e-21!53;CL:0000838!2.69e-20!52;CL:0000134!2.36e-16!358;CL:0002320!4.02e-15!365;CL:0000219!9.39e-13!390;CL:0000084!6.50e-11!25;CL:0000827!6.50e-11!25;CL:0000945!4.89e-09!24;CL:0000826!4.89e-09!24;CL:0000990!2.36e-08!8;CL:0002393!1.24e-07!9;CL:0002397!1.24e-07!9;CL:0000451!1.87e-07!10;CL:0000034!3.96e-07!444;CL:0000791!4.81e-07!18;CL:0000789!4.81e-07!18;CL:0002420!4.81e-07!18;CL:0002419!4.81e-07!18;CL:0000790!4.81e-07!18;CL:0000048!6.09e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.85e-36;33!CL:0002057;7.85e-36;33!CL:0000473;1.99e-35;39!CL:0000234;1.99e-35;39!CL:0000576;7.25e-26;48!CL:0000766;9.60e-26;69!CL:0000738;3.00e-19;136!CL:0002087;1.32e-18;104!CL:0000763;1.42e-16;100!CL:0000988;8.73e-16;177!CL:0000990;7.47e-10;8!CL:0000542;7.26e-09;53!CL:0000219;1.65e-08;193!CL:0000084;2.41e-08;25!CL:0000235;3.22e-08;6!CL:0000453;5.13e-08;5!CL:0000945;5.67e-08;24!CL:0000451;1.10e-07;10!CL:0000094;1.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.43e-84,136;CL:0000037,1.62e-83,168;CL:0000988,4.27e-82,177;CL:0002032,1.92e-81,161;CL:0000837,1.92e-81,161;CL:0002031,1.35e-67,120;CL:0002087,1.66e-66,115;CL:0000763,8.41e-62,108;CL:0000049,8.41e-62,108;CL:0000766,4.66e-59,72;CL:0000473,2.06e-54,48;CL:0000234,2.06e-54,48;CL:0000557,1.09e-53,67;CL:0002009,6.65e-51,61;CL:0000839,3.61e-50,66;CL:0002194,1.83e-48,59;CL:0000576,1.83e-48,59;CL:0000040,1.83e-48,59;CL:0000559,1.83e-48,59;CL:0000860,1.98e-47,42;CL:0002057,1.98e-47,42;CL:0000134,5.32e-23,354;CL:0002320,6.86e-22,361;CL:0000219,1.32e-18,386;CL:0000542,1.39e-16,53;CL:0000051,1.39e-16,53;CL:0000838,7.71e-16,52;CL:0000048,2.12e-13,427;CL:0000723,8.90e-13,433;CL:0000034,1.92e-12,441;CL:0000990,6.41e-10,8;CL:0002393,6.81e-09,9;CL:0002397,6.81e-09,9;CL:0000235,3.49e-08,6;CL:0000084,3.91e-08,25;CL:0000827,3.91e-08,25;CL:0000453,5.48e-08,5;CL:0000945,5.93e-08,24;CL:0000826,5.93e-08,24;CL:0000451,9.76e-08,10;CL:0000094,1.39e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;9.48e-34;42!CL:0000049;6.05e-16;108!CL:0000051;7.26e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!9.66e-16!51;DOID:0060083!9.66e-16!51;DOID:1240!1.53e-11!39;DOID:8692!1.06e-07!31;DOID:0060058!2.83e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.39e-07;51!DOID:0060083;4.39e-07;51!DOID:0060058;6.04e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.11e-10,51;DOID:0060083,2.11e-10,51;DOID:0060058,4.78e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.29e-46!102;UBERON:0003061!2.29e-46!102;UBERON:0002193!2.76e-41!112;UBERON:0002371!2.52e-33!80;UBERON:0001474!4.51e-29!86;UBERON:0002405!6.21e-24!115;UBERON:0004765!7.46e-21!101;UBERON:0001434!7.46e-21!101;UBERON:0002384!6.42e-14!375;UBERON:0000178!3.39e-10!15;UBERON:0000179!3.39e-10!15;UBERON:0000463!3.39e-10!15;UBERON:0003081!7.93e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-14;15!UBERON:0000179;2.28e-14;15!UBERON:0000463;2.28e-14;15!UBERON:0002390;1.71e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.23e-63,98;UBERON:0003061,6.23e-63,98;UBERON:0002193,1.78e-56,108;UBERON:0002371,1.89e-46,76;UBERON:0002405,5.97e-43,93;UBERON:0001474,1.46e-41,82;UBERON:0004765,4.43e-36,90;UBERON:0001434,1.71e-30,100;UBERON:0002384,5.82e-21,371;UBERON:0003081,7.89e-20,203;UBERON:0000178,2.48e-14,15;UBERON:0000179,2.48e-14,15;UBERON:0000463,2.48e-14,15;UBERON:0002204,1.32e-11,167;UBERON:0000926,1.49e-07,315;UBERON:0004120,1.49e-07,315;UBERON:0006603,1.49e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6214633989652,7.30695246104517,7.39881344348585,1.18009283054671,1.53531759238885,1.70297735647684,0,0,0,0.697204805222715,1.56386155736164,0.587200878669695,0.553995408531877,7.01905566145496,2.38711957787437,0.895661896959697,0.32389366601898,1.80302897343931,4.36194716338694,2.26725566213286,1.69808842831471,6.97287110717054,2.87817521615278,2.47765096716083,8.34307937734236,4.86705342405291,8.27687804610048,9.99762474136194,7.74581620300591,9.47985406160392,6.21199720490596,6.5497476013883,6.96642801779762,9.48860066349798,3.53021929783703,3.83602275479425,1.9791078011203,3.59034583718937,1.70489900213078,14.2202526928006,5.10646702222026,8.09668923694247,10.0499466102697,5.73631210262222,3.9093992046921,16.345786571101,7.36555271975129,10.4432587855492,8.45021145247767,8.92938059853183,1.88692780957538,4.04383072127382,7.65902153491682,4.018139667427,3.42015292489498,6.16641699317179,3.47061892152804,1.75996244461323,0,0,1.28019066769952,1.60158394814405,0,0.661044872784862,0,1.70763890732835,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0.196709770113833,3.14408610199332,2.2616164889946,3.00935691703221,0.651844533267181,1.89379122293893,0,3.67654507721073,2.06224135232386,3.54454231333794,1.89562704635511,3.84273959177025,2.86130564631732,3.61763390128087,3.31620021343018,4.92665245749589,1.4828656316206,0.802622484269139,1.04535523804977,2.49280553934646,1.53288197440768,0.68725489096526,3.03623630423403,0.318565414324097,0,0.950452044448374,1.20460095262218,1.4078527226986,0,1.65744076430812,0.821127996921047,1.00803371612366,3.4767225451856,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,3.8945687238562,3.65672448328461,9.04114131528283,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.929551542956147,0.621966330092223,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,3.97807250736704,4.01304138179566,0,0,0,0.358234090811393,0.290633938513962,0.766765358330422,1.97065295158377,2.20121085033065,1.4512968087854,1.58531948758658,1.13618190083742,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,6.02708509718552,23.1917333431335,0,0,0,0,0,0,3.25046917581229,0.788123040807709,4.74380664690938,2.56686072559497,0,0,0,0,0,24.717231790257,113.681354497529,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,5.1771408196468,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0.564862804660675,0,0,0,0,1.52234282769651,3.0585488285695,7.40541343326411,1.90585420366231,2.05681136543097,2.59389324477087,3.24018862342869,3.17250070517708,0,0,0.245040215981032,2.60124445176006,0.721346064882224,0.711418433484141,2.23196781820351,5.9873811429845,3.63860203251497,3.17510374085824,0,3.93116049358842,2.28234679033192,3.76031749855256,0,1.35433422241283,3.05117342697029,3.43059502224781,0.425846237690326,8.93113896364988,0.614481528616916,0,0.667396566847634,3.32159762183469,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0,1.17206543417515,0,0.557216921387392,0,0,0.296964680832639,0,0,0.140669416410513,0,2.14245036494787,0,0.19924798825107,1.93398740871803,0,0,1.23084805461069,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0.520855522170466,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.227884111694002,0.46112780877612,1.97466817701499,0.217294743844016,0,0.0915975934018623,0.533034776018635,8.17546385565892,0.784901281975124,1.49590513710141,0.225595660617181,0,1.1747511088309,0,0.317873157960757,0,0,0.141353071433941,0,0,0,0,1.18608451472249,1.97702302314405,2.08843899010911,0,0,0.234264445725339,3.46664099509765,0,0,0,0,0,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0,2.79562669187248,0,0,0,0,0.290967049465258,0,0.451961481561065,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,4.46908502274835,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,2.87889329023667,0,0,0.160753148465019,0,0,5.39937339723601,5.41661368190565,0,0,0,0,0,0.537862017998534,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.492555124496034,0,0,1.02586563574658,0,0,0,0,0,0.533937062838473,0,3.31391244277756,3.47316215268366,2.17372795087739,4.62811873847405,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@LCP1 | |||
}} |
Revision as of 02:23, 11 September 2013
Short description: | p4@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -86bp_to_BC015001_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.23e-63 | 98 |
blood island | 6.23e-63 | 98 |
hemolymphoid system | 1.78e-56 | 108 |
bone marrow | 1.89e-46 | 76 |
immune system | 5.97e-43 | 93 |
bone element | 1.46e-41 | 82 |
skeletal element | 4.43e-36 | 90 |
skeletal system | 1.71e-30 | 100 |
connective tissue | 5.82e-21 | 371 |
lateral plate mesoderm | 7.89e-20 | 203 |
blood | 2.48e-14 | 15 |
haemolymphatic fluid | 2.48e-14 | 15 |
organism substance | 2.48e-14 | 15 |
musculoskeletal system | 1.32e-11 | 167 |
mesoderm | 1.49e-07 | 315 |
mesoderm-derived structure | 1.49e-07 | 315 |
presumptive mesoderm | 1.49e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.11e-10 | 51 |
immune system cancer | 2.11e-10 | 51 |
lymphoma | 4.78e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.