FFCP PHASE1:Hg19::chr13:45011349..45011391,-: Difference between revisions
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{{FFCP | 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2,1.38251932362818,1.72090943528111,1.77498001095848,2.47118873801557,1.27016115057279,1.8328549483524,0.31020638566432,0,1.11855431797792,1.47225350422864,1.34109717480496,5.17943069750316,4.00384946739363,5.799072156691,2.4285549652957,2.33939463462106,3.58111395290463,1.18920090777569,1.1294608203896,5.82684738750774,2.71733118420012,0.540219106755613,2.84127428655144,0.940634592723046,2.45148321753905,0,2.74831853960923,1.18818560130834,2.5359343655004,0.339854229375634,1.31577485171795,1.4180735354187,0,0.892769693028288,6.35210769088245,5.77737840162011,1.46067277649303,1.37618785021362,1.86341458096887,4.41760374140917,3.33158301935482,3.49080552272302,3.1741610430924,1.48798007266701,1.84870251452567,0.432626562123789,2.77566134637174,2.513108155165,2.4072715192173,1.01988829741982,1.60330443159336,2.57305718697566,3.50990555009325,3.41004141982077,3.48353369203032,2.48750831837634,1.86179392551411,2.34557380091079,3.57096647195611,2.51896748360424,1.42771842880473,3.02756028967656,7.2557760437108,1.81905470062397,1.30630048738177,3.76456631193809,1.6164492723501,3.08405483188508,2.66128285236811,3.5003405502719,4.90945791037491,7.7228912914776,2.42528045687785,7.03922827210363,3.17827754875453,1.62758471326295,1.99727032255654,2.41528552309231,0.641136984606466|short_description=p4@TSC22D1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16826 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001243797_5end | |||
|description=CAGE_peak_4_at_TSC22D1_5end | |||
|id=chr13:45011349..45011391,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.24e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.57e-16!115;UBERON:0003056!6.42e-10!61;UBERON:0000033!8.62e-10!123;UBERON:0005743!1.02e-09!86;UBERON:0000468!1.05e-09!659;UBERON:0001017!1.20e-09!82;UBERON:0000153!1.35e-09!129;UBERON:0007811!1.35e-09!129;UBERON:0000922!1.59e-09!612;UBERON:0003075!7.58e-09!86;UBERON:0007284!7.58e-09!86;UBERON:0004121!8.69e-09!169;UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0000924!2.43e-08!173;UBERON:0006601!2.43e-08!173;UBERON:0000481!2.44e-08!347;UBERON:0001869!3.49e-08!32;UBERON:0002346!3.82e-08!90;UBERON:0002020!4.75e-08!34;UBERON:0003528!4.75e-08!34;UBERON:0001049!6.92e-08!57;UBERON:0005068!6.92e-08!57;UBERON:0006241!6.92e-08!57;UBERON:0007135!6.92e-08!57;UBERON:0001893!1.41e-07!34;UBERON:0003080!1.46e-07!42;UBERON:0002050!1.72e-07!605;UBERON:0005423!1.72e-07!605;UBERON:0000923!1.99e-07!604;UBERON:0005291!1.99e-07!604;UBERON:0006598!1.99e-07!604;UBERON:0002532!1.99e-07!604;UBERON:0002791!2.53e-07!33;UBERON:0002780!3.11e-07!41;UBERON:0001890!3.11e-07!41;UBERON:0006240!3.11e-07!41;UBERON:0000955!3.56e-07!69;UBERON:0006238!3.56e-07!69;UBERON:0002619!3.61e-07!22;UBERON:0002616!4.11e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.82e-07;22!UBERON:0001869;2.06e-07;32!UBERON:0002791;4.06e-07;32!UBERON:0001950;6.37e-07;20!UBERON:0003528;7.12e-07;34!UBERON:0002020;7.12e-07;34!UBERON:0000956;9.18e-07;25!UBERON:0000203;9.18e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.45e-15,114;UBERON:0003075,1.98e-09,82;UBERON:0007284,1.98e-09,82;UBERON:0003056,6.26e-09,61;UBERON:0001017,8.62e-09,81;UBERON:0004121,1.30e-08,171;UBERON:0000924,1.30e-08,171;UBERON:0006601,1.30e-08,171;UBERON:0002346,1.53e-08,86;UBERON:0001869,6.17e-08,32;UBERON:0003528,8.08e-08,34;UBERON:0002020,8.08e-08,34;UBERON:0002791,1.05e-07,32;UBERON:0001016,1.14e-07,89;UBERON:0001049,1.75e-07,56;UBERON:0005068,1.75e-07,56;UBERON:0006241,1.75e-07,56;UBERON:0007135,1.75e-07,56;UBERON:0001893,2.28e-07,34;UBERON:0000073,3.20e-07,53;UBERON:0002616,3.20e-07,53;UBERON:0010314,4.10e-07,132;UBERON:0002780,4.59e-07,41;UBERON:0001890,4.59e-07,41;UBERON:0003080,4.59e-07,41;UBERON:0006240,4.59e-07,41;UBERON:0002619,6.62e-07,22;UBERON:0010371,8.13e-07,104 | |||
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| |||
|short_description=p4@TSC22D1 | |||
}} |
Revision as of 02:19, 11 September 2013
Short description: | p4@TSC22D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TSC22D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001243797_5end |
EntrezGene: | TSC22D1 |
HGNC: | 16826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.45e-15 | 114 |
neural plate | 1.98e-09 | 82 |
presumptive neural plate | 1.98e-09 | 82 |
pre-chordal neural plate | 6.26e-09 | 61 |
central nervous system | 8.62e-09 | 81 |
ectoderm-derived structure | 1.30e-08 | 171 |
ectoderm | 1.30e-08 | 171 |
presumptive ectoderm | 1.30e-08 | 171 |
neurectoderm | 1.53e-08 | 86 |
cerebral hemisphere | 6.17e-08 | 32 |
brain grey matter | 8.08e-08 | 34 |
gray matter | 8.08e-08 | 34 |
regional part of telencephalon | 1.05e-07 | 32 |
nervous system | 1.14e-07 | 89 |
neural tube | 1.75e-07 | 56 |
neural rod | 1.75e-07 | 56 |
future spinal cord | 1.75e-07 | 56 |
neural keel | 1.75e-07 | 56 |
telencephalon | 2.28e-07 | 34 |
regional part of nervous system | 3.20e-07 | 53 |
regional part of brain | 3.20e-07 | 53 |
structure with developmental contribution from neural crest | 4.10e-07 | 132 |
regional part of forebrain | 4.59e-07 | 41 |
forebrain | 4.59e-07 | 41 |
anterior neural tube | 4.59e-07 | 41 |
future forebrain | 4.59e-07 | 41 |
regional part of cerebral cortex | 6.62e-07 | 22 |
ecto-epithelium | 8.13e-07 | 104 |
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