FFCP PHASE1:Hg19::chr13:31736097..31736108,-: Difference between revisions
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{{FFCP | 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35,0.31020638566432,0,0.671132590786754,0.392600934460972,1.09726132484042,0.647428837187895,1.02662806856247,0,0.485710993059139,0.935757853848423,0.596852325484105,1.30812099855325,0.90356865631168,0.329821550236287,0.301925687133347,0.308696632431779,0.437119121007915,1.41095188908457,0.980593287015622,1.17838273550813,0.785233868459781,5.34683520588755,2.5359343655004,1.0195626881269,0.845855261818682,1.22469987149797,2.09876427442351,1.2498775702396,1.05868461514708,0.481448200135009,0,3.21110498383179,5.73358332605805,4.25983217921598,3.12760854878208,3.05445483238264,0.5290268405154,0.371995018166751,0.462175628631418,0.865253124247578,1.51399709802095,1.42045243552804,0.126698501011437,1.93778776509765,4.80991329478009,2.75684698604535,2.25636785363138,4.01627100556669,0.803892390468535,1.65833887891756,6.10254675585182,1.49263787330687,1.66645102024618,2.0668451147522,2.17261500035503,0.672791175483681,1.84576759006678,1.41482032270754,0.870866991587845,1.71116650542641,0.5388164241167,3.37094365345579,1.66330178273007,1.87227517805241,1.70763753404345,0,0.449126010532934,2.34640942403454,0.611207220914332,0.406896178315738,5.99181096766961,1.20764276154616,0.961705476909699|short_description=p5@HSPH1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16969 | |||
|TSSclassifier=S | |||
|UniProt=Q92598 | |||
|association_with_transcript=8bp_to_NM_006644,uc001utj.2,uc001utk.2,uc010aaw.2_5end | |||
|description=CAGE_peak_5_at_HSPH1_5end | |||
|id=chr13:31736097..31736108,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.49e-15!41;UBERON:0001890!1.49e-15!41;UBERON:0006240!1.49e-15!41;UBERON:0003080!4.26e-15!42;UBERON:0001049!8.58e-14!57;UBERON:0005068!8.58e-14!57;UBERON:0006241!8.58e-14!57;UBERON:0007135!8.58e-14!57;UBERON:0000073!1.66e-13!94;UBERON:0001016!1.66e-13!94;UBERON:0001017!3.93e-13!82;UBERON:0001893!1.28e-12!34;UBERON:0005743!1.47e-12!86;UBERON:0002616!3.43e-12!59;UBERON:0002020!3.79e-12!34;UBERON:0003528!3.79e-12!34;UBERON:0002791!4.82e-12!33;UBERON:0001869!6.45e-12!32;UBERON:0000955!4.42e-11!69;UBERON:0006238!4.42e-11!69;UBERON:0004121!7.06e-11!169;UBERON:0000924!9.51e-11!173;UBERON:0006601!9.51e-11!173;UBERON:0000153!1.12e-09!129;UBERON:0007811!1.12e-09!129;UBERON:0003056!1.15e-09!61;UBERON:0000956!2.34e-09!25;UBERON:0000203!2.34e-09!25;UBERON:0003075!3.37e-09!86;UBERON:0007284!3.37e-09!86;UBERON:0002346!6.14e-09!90;UBERON:0000033!8.53e-09!123;UBERON:0007023!1.04e-08!115;UBERON:0002619!2.58e-08!22;UBERON:0001950!3.83e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.92e-13;41!UBERON:0001890;8.92e-13;41!UBERON:0002791;7.74e-12;32!UBERON:0001869;1.63e-11;32!UBERON:0001893;1.85e-11;34!UBERON:0003528;9.70e-11;34!UBERON:0002020;9.70e-11;34!UBERON:0000956;3.61e-10;25!UBERON:0000203;3.61e-10;25!UBERON:0000073;4.22e-10;53!UBERON:0002616;4.22e-10;53!UBERON:0002619;3.92e-09;22!UBERON:0001950;9.63e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.13e-17,41;UBERON:0001890,1.13e-17,41;UBERON:0003080,1.13e-17,41;UBERON:0006240,1.13e-17,41;UBERON:0001049,2.27e-16,56;UBERON:0005068,2.27e-16,56;UBERON:0006241,2.27e-16,56;UBERON:0007135,2.27e-16,56;UBERON:0001016,3.72e-16,89;UBERON:0000073,7.22e-16,53;UBERON:0002616,7.22e-16,53;UBERON:0001017,1.87e-14,81;UBERON:0001893,3.45e-14,34;UBERON:0002791,2.13e-13,32;UBERON:0001869,2.36e-13,32;UBERON:0003528,2.66e-13,34;UBERON:0002020,2.66e-13,34;UBERON:0000955,8.38e-13,68;UBERON:0006238,8.38e-13,68;UBERON:0004121,3.01e-12,171;UBERON:0000924,3.01e-12,171;UBERON:0006601,3.01e-12,171;UBERON:0003056,3.05e-11,61;UBERON:0000956,8.82e-11,25;UBERON:0000203,8.82e-11,25;UBERON:0003075,1.09e-10,82;UBERON:0007284,1.09e-10,82;UBERON:0002346,1.13e-10,86;UBERON:0010371,1.13e-10,104;UBERON:0002619,1.53e-09,22;UBERON:0001950,3.77e-08,20;UBERON:0007023,1.49e-07,114;UBERON:0010314,7.73e-07,132 | |||
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| |||
|short_description=p5@HSPH1 | |||
}} |
Revision as of 02:01, 11 September 2013
Short description: | p5@HSPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HSPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_006644, uc001utj.2, uc001utk.2, uc010aaw.2_5end |
EntrezGene: | HSPH1 |
HGNC: | 16969 |
UniProt: | Q92598 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.13e-17 | 41 |
forebrain | 1.13e-17 | 41 |
anterior neural tube | 1.13e-17 | 41 |
future forebrain | 1.13e-17 | 41 |
neural tube | 2.27e-16 | 56 |
neural rod | 2.27e-16 | 56 |
future spinal cord | 2.27e-16 | 56 |
neural keel | 2.27e-16 | 56 |
nervous system | 3.72e-16 | 89 |
regional part of nervous system | 7.22e-16 | 53 |
regional part of brain | 7.22e-16 | 53 |
central nervous system | 1.87e-14 | 81 |
telencephalon | 3.45e-14 | 34 |
regional part of telencephalon | 2.13e-13 | 32 |
cerebral hemisphere | 2.36e-13 | 32 |
brain grey matter | 2.66e-13 | 34 |
gray matter | 2.66e-13 | 34 |
brain | 8.38e-13 | 68 |
future brain | 8.38e-13 | 68 |
ectoderm-derived structure | 3.01e-12 | 171 |
ectoderm | 3.01e-12 | 171 |
presumptive ectoderm | 3.01e-12 | 171 |
pre-chordal neural plate | 3.05e-11 | 61 |
cerebral cortex | 8.82e-11 | 25 |
pallium | 8.82e-11 | 25 |
neural plate | 1.09e-10 | 82 |
presumptive neural plate | 1.09e-10 | 82 |
neurectoderm | 1.13e-10 | 86 |
ecto-epithelium | 1.13e-10 | 104 |
regional part of cerebral cortex | 1.53e-09 | 22 |
neocortex | 3.77e-08 | 20 |
adult organism | 1.49e-07 | 114 |
structure with developmental contribution from neural crest | 7.73e-07 | 132 |
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