FFCP PHASE1:Hg19::chr12:119419159..119419192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84530|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29389|TSSclassifier=S|UniProt=A7MD48|association_with_transcript=-107bp_to_ENST00000267260,NM_194286_5end|coexpression_cluster_id=C118|description=CAGE_peak_5_at_SRRM4_5end|id=chr12:119419159..119419192,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;9.39e-23;3!UBERON:0006601;4.96e-15;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.50e-85!57;UBERON:0005068!4.50e-85!57;UBERON:0006241!4.50e-85!57;UBERON:0007135!4.50e-85!57;UBERON:0001017!1.05e-76!82;UBERON:0005743!8.80e-76!86;UBERON:0000073!2.92e-73!94;UBERON:0001016!2.92e-73!94;UBERON:0000955!3.67e-71!69;UBERON:0006238!3.67e-71!69;UBERON:0002616!2.02e-70!59;UBERON:0003075!6.32e-64!86;UBERON:0007284!6.32e-64!86;UBERON:0002780!5.88e-61!41;UBERON:0001890!5.88e-61!41;UBERON:0006240!5.88e-61!41;UBERON:0002346!1.45e-60!90;UBERON:0003080!2.49e-59!42;UBERON:0002020!1.52e-56!34;UBERON:0003528!1.52e-56!34;UBERON:0001893!2.55e-56!34;UBERON:0001869!4.94e-56!32;UBERON:0001950!1.41e-54!20;UBERON:0002619!1.75e-54!22;UBERON:0002791!1.18e-53!33;UBERON:0000956!1.77e-47!25;UBERON:0000203!1.77e-47!25;UBERON:0007023!1.79e-45!115;UBERON:0003056!8.63e-44!61;UBERON:0000033!3.17e-39!123;UBERON:0000153!7.21e-37!129;UBERON:0007811!7.21e-37!129;UBERON:0004121!1.84e-35!169;UBERON:0000924!2.37e-34!173;UBERON:0006601!2.37e-34!173;UBERON:0003076!9.94e-26!15;UBERON:0003057!9.94e-26!15;UBERON:0000025!1.95e-20!194;UBERON:0000200!5.41e-19!6;UBERON:0004733!7.24e-19!12;UBERON:0002028!7.24e-19!12;UBERON:0007277!7.24e-19!12;UBERON:0001871!1.72e-18!7;UBERON:0004732!2.86e-17!13;UBERON:0002021!1.64e-15!5;UBERON:0001872!1.69e-15!5;UBERON:0004111!4.59e-15!241;UBERON:0002298!1.20e-12!8;UBERON:0000483!4.75e-12!309;UBERON:0002680!7.68e-12!9;UBERON:0001895!7.68e-12!9;UBERON:0010092!7.68e-12!9;UBERON:0000119!8.13e-12!312;UBERON:0000477!1.06e-11!286;UBERON:0000064!2.48e-11!219;UBERON:0002420!4.77e-11!9;UBERON:0007245!4.77e-11!9;UBERON:0010009!4.77e-11!9;UBERON:0010011!4.77e-11!9;UBERON:0000454!4.77e-11!9;UBERON:0002308!7.11e-11!9;UBERON:0000125!7.11e-11!9;UBERON:0002771!2.07e-10!3;UBERON:0000349!5.79e-10!5;UBERON:0000475!1.05e-09!365;UBERON:0000988!1.81e-09!3;UBERON:0001896!2.41e-09!3;UBERON:0005290!2.41e-09!3;UBERON:0010096!2.41e-09!3;UBERON:0002240!8.32e-09!3;UBERON:0001870!2.50e-07!2;UBERON:0003296!3.91e-07!4;UBERON:0010133!3.91e-07!4;UBERON:0001876!4.30e-07!2;UBERON:0000369!4.44e-07!4;UBERON:0002435!4.44e-07!4;UBERON:0000204!4.44e-07!4;UBERON:0010082!4.44e-07!4;UBERON:0001905!7.98e-07!2;UBERON:0002757!7.98e-07!2;UBERON:0010134!7.98e-07!2;UBERON:0002784!7.98e-07!2;UBERON:0005408!7.98e-07!2;UBERON:0001899!7.98e-07!2;UBERON:0002148!8.22e-07!2;UBERON:0009662!8.22e-07!2|ontology_enrichment_uberon_v019=UBERON:0001950;3.20e-95;20!UBERON:0002619;1.12e-86;22!UBERON:0000956;2.55e-76;25!UBERON:0000203;2.55e-76;25!UBERON:0001869;1.13e-65;32!UBERON:0001893;1.82e-60;34!UBERON:0002791;5.41e-58;32!UBERON:0003528;2.95e-55;34!UBERON:0002020;2.95e-55;34!UBERON:0000200;2.08e-43;6!UBERON:0002780;3.30e-41;41!UBERON:0001890;3.30e-41;41!UBERON:0000073;3.64e-39;53!UBERON:0002616;3.64e-39;53!UBERON:0002021;1.26e-35;5!UBERON:0000955;1.01e-29;68!UBERON:0001017;9.06e-27;75!UBERON:0001872;3.59e-23;5!UBERON:0001870;1.57e-22;3!UBERON:0001016;5.47e-21;83!UBERON:0001871;7.77e-17;6!UBERON:0002702;5.97e-16;2!UBERON:0002771;1.00e-15;2!UBERON:0002680;3.64e-13;9!UBERON:0001895;3.64e-13;9!UBERON:0007023;8.12e-13;114!UBERON:0002037;1.17e-11;6!UBERON:0004733;6.55e-10;12!UBERON:0002028;6.55e-10;12!UBERON:0011216;7.84e-10;132!UBERON:0004732;3.71e-09;13!UBERON:0002581;1.02e-08;1!UBERON:0002902;1.02e-08;1!UBERON:0003112;1.02e-08;1!UBERON:0011158;1.02e-08;1!UBERON:0009899;1.02e-08;1!UBERON:0003128;1.02e-08;1!UBERON:0001703;1.02e-08;1!UBERON:0002241;1.02e-08;1!UBERON:0001882;2.46e-08;1!UBERON:0002022;2.46e-08;1!UBERON:0007190;2.46e-08;1!UBERON:0005403;2.46e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.41e-95,20;UBERON:0002619,8.69e-87,22;UBERON:0000956,2.03e-76,25;UBERON:0000203,2.03e-76,25;UBERON:0001869,1.27e-74,32;UBERON:0000073,3.68e-72,53;UBERON:0002616,3.68e-72,53;UBERON:0001893,3.65e-70,34;UBERON:0001049,3.75e-68,56;UBERON:0005068,3.75e-68,56;UBERON:0006241,3.75e-68,56;UBERON:0007135,3.75e-68,56;UBERON:0002791,7.35e-67,32;UBERON:0000955,7.02e-65,68;UBERON:0006238,7.02e-65,68;UBERON:0002780,2.78e-64,41;UBERON:0001890,2.78e-64,41;UBERON:0003080,2.78e-64,41;UBERON:0006240,2.78e-64,41;UBERON:0003528,7.50e-63,34;UBERON:0002020,7.50e-63,34;UBERON:0001017,1.78e-58,81;UBERON:0001016,2.40e-52,89;UBERON:0003075,1.54e-45,82;UBERON:0007284,1.54e-45,82;UBERON:0000200,1.26e-43,6;UBERON:0002346,2.95e-43,86;UBERON:0003056,2.24e-42,61;UBERON:0007023,3.57e-38,114;UBERON:0002021,3.47e-35,5;UBERON:0010371,3.90e-35,104;UBERON:0010314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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29389 | |||
|TSSclassifier=S | |||
|UniProt=A7MD48 | |||
|association_with_transcript=-107bp_to_ENST00000267260,NM_194286_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_5_at_SRRM4_5end | |||
|id=chr12:119419159..119419192,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.39e-23;3!UBERON:0006601;4.96e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SRRM4 | |||
}} |
Revision as of 21:12, 10 September 2013
Short description: | p5@SRRM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SRRM4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | -107bp_to_ENST00000267260, NM_194286_5end |
EntrezGene: | SRRM4 |
HGNC: | 29389 |
UniProt: | A7MD48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.