FFCP PHASE1:Hg19::chr12:113658826..113658870,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25168 | |||
|TSSclassifier=S | |||
|UniProt=F8VZV9 | |||
|association_with_transcript=0bp_to_ENST00000546692_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_IQCD_5end | |||
|id=chr12:113658826..113658870,- | |||
|ontology_enrichment_celltype=CL:0000066!5.08e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
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| |||
|short_description=p2@IQCD | |||
}} |
Revision as of 20:59, 10 September 2013
Short description: | p2@IQCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_IQCD_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000546692_5end |
EntrezGene: | IQCD |
HGNC: | 25168 |
UniProt: | F8VZV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 7.28e-15 | 82 |
presumptive neural plate | 7.28e-15 | 82 |
pre-chordal neural plate | 3.07e-14 | 61 |
neurectoderm | 1.71e-13 | 86 |
regional part of nervous system | 3.91e-13 | 53 |
regional part of brain | 3.91e-13 | 53 |
neural tube | 5.33e-13 | 56 |
neural rod | 5.33e-13 | 56 |
future spinal cord | 5.33e-13 | 56 |
neural keel | 5.33e-13 | 56 |
central nervous system | 1.05e-12 | 81 |
nervous system | 2.71e-12 | 89 |
brain | 3.23e-12 | 68 |
future brain | 3.23e-12 | 68 |
ecto-epithelium | 1.51e-11 | 104 |
regional part of forebrain | 5.67e-11 | 41 |
forebrain | 5.67e-11 | 41 |
anterior neural tube | 5.67e-11 | 41 |
future forebrain | 5.67e-11 | 41 |
structure with developmental contribution from neural crest | 1.47e-10 | 132 |
adult organism | 4.10e-09 | 114 |
brain grey matter | 1.35e-08 | 34 |
gray matter | 1.35e-08 | 34 |
ectoderm-derived structure | 6.84e-08 | 171 |
ectoderm | 6.84e-08 | 171 |
presumptive ectoderm | 6.84e-08 | 171 |
telencephalon | 1.18e-07 | 34 |
organ system subdivision | 1.87e-07 | 223 |
regional part of telencephalon | 2.43e-07 | 32 |
cerebral hemisphere | 2.43e-07 | 32 |
tube | 3.00e-07 | 192 |
brainstem | 7.21e-07 | 6 |
epithelium | 8.42e-07 | 306 |
cell layer | 8.68e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-11 | 106 |
cell type cancer | 3.30e-09 | 143 |
adenocarcinoma | 1.89e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.