FFCP PHASE1:Hg19::chr12:113627532..113627537,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:113627532..113627537,-|id=chr12:113627532..113627537,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000313;1.30e-19;1!CL:0000047;1.72e-10;2!CL:0000159;1.72e-10;2!CL:0000322;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0000313,1.56e-19,1;CL:0000159,1.89e-10,2;CL:0000047,4.42e-10,8;CL:0000322,3.35e-07,3|ontology_enrichment_development_v019=UBERON:0005425;3.25e-19;1!UBERON:0003056;2.79e-07;3|ontology_enrichment_disease=DOID:14566!9.94e-10!239;DOID:162!1.06e-09!235;DOID:305!1.87e-09!106;DOID:0050686!2.25e-08!137;DOID:0050687!2.59e-08!143;DOID:299!6.15e-07!25|ontology_enrichment_disease_v019=DOID:4468;5.68e-37;2!DOID:2152;1.30e-19;1!DOID:3910;2.72e-10;2!DOID:299;3.72e-07;25|ontology_enrichment_disease_v019_2=DOID:4468,5.69e-37,2;DOID:2152,1.56e-19,1;DOID:3910,3.58e-10,2;DOID:299,3.80e-07,25|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004911;1.30e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0004909;1.72e-10;2!UBERON:0004903;2.72e-10;2!UBERON:0003714;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.56e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,5.01268954180134,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.44701316529778,0,0.63337622438398,0,0,0.755798243562828,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,1.01701460117107,0.236387681767936,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,1.05499032264014,2.93819054686466,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0.569219092059585,0,0.520679215005393,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.397429223405979,0.126621591911757,0.586654148204409,0.240476460754601,0,0.19980960958213,0.144090417154106,0,0.686379991447858,0,0,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0.955538938977433,2.12525320415805,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0|short_description=p@chr12:113627532..113627537,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:113627532..113627537,- | |||
|id=chr12:113627532..113627537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.30e-19;1!CL:0000047;1.72e-10;2!CL:0000159;1.72e-10;2!CL:0000322;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.56e-19,1;CL:0000159,1.89e-10,2;CL:0000047,4.42e-10,8;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.25e-19;1!UBERON:0003056;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!9.94e-10!239;DOID:162!1.06e-09!235;DOID:305!1.87e-09!106;DOID:0050686!2.25e-08!137;DOID:0050687!2.59e-08!143;DOID:299!6.15e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.68e-37;2!DOID:2152;1.30e-19;1!DOID:3910;2.72e-10;2!DOID:299;3.72e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.69e-37,2;DOID:2152,1.56e-19,1;DOID:3910,3.58e-10,2;DOID:299,3.80e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.30e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0004909;1.72e-10;2!UBERON:0004903;2.72e-10;2!UBERON:0003714;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0002173;2.72e-10;2!UBERON:0002186;2.72e-10;2!UBERON:0004821;2.79e-07;3!UBERON:0007499;2.79e-07;3!UBERON:0003215;2.79e-07;3!UBERON:0010368;2.79e-07;3!UBERON:0009911;2.79e-07;3!UBERON:0002299;2.79e-07;3!UBERON:0006524;2.79e-07;3!UBERON:0008874;2.79e-07;3!UBERON:0002169;2.79e-07;3!UBERON:0004894;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.56e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,5.01268954180134,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.44701316529778,0,0.63337622438398,0,0,0.755798243562828,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,1.01701460117107,0.236387681767936,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,1.05499032264014,2.93819054686466,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0.569219092059585,0,0.520679215005393,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.397429223405979,0.126621591911757,0.586654148204409,0.240476460754601,0,0.19980960958213,0.144090417154106,0,0.686379991447858,0,0,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0.955538938977433,2.12525320415805,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr12:113627532..113627537,- | |||
}} |
Revision as of 20:59, 10 September 2013
Short description: | p@chr12:113627532..113627537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:113627532..113627537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.56e-19 | 1 |
seromucus secreting cell | 1.89e-10 | 2 |
neuronal stem cell | 4.42e-10 | 8 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.56e-19 | 1 |
cranial nerve II | 2.71e-19 | 1 |
cranial nerve | 2.71e-19 | 1 |
nerve trunk | 2.71e-19 | 1 |
nerve connecting eye with brain | 2.71e-19 | 1 |
nerve | 2.71e-19 | 1 |
retinal neural layer | 2.71e-19 | 1 |
presumptive neural retina | 2.71e-19 | 1 |
epithelium of gonad | 1.89e-10 | 2 |
neural tissue | 2.49e-10 | 2 |
multi cell component structure | 2.49e-10 | 2 |
neuron projection bundle | 2.49e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.69e-37 | 2 |
ovary epithelial cancer | 1.56e-19 | 1 |
lung adenocarcinoma | 3.58e-10 | 2 |
adenocarcinoma | 3.80e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.