FFCP PHASE1:Hg19::chr12:113416340..113416363,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4939|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8087|TSSclassifier=S|UniProt=F8W1C5|association_with_transcript=0bp_to_ENST00000552756_5end|coexpression_cluster_id=C413|description=CAGE_peak_4_at_OAS2_5end|id=chr12:113416340..113416363,+|ontology_enrichment_celltype=CL:0002087!1.25e-31!119;CL:0000738!6.43e-29!140;CL:0002031!1.32e-26!124;CL:0002057!1.48e-22!42;CL:0002194!3.01e-21!63;CL:0000576!3.01e-21!63;CL:0000040!3.01e-21!63;CL:0000559!3.01e-21!63;CL:0000860!1.41e-19!45;CL:0002009!1.48e-19!65;CL:0000766!2.88e-19!76;CL:0000557!1.44e-18!71;CL:0000839!1.70e-18!70;CL:0000037!4.63e-18!172;CL:0000566!4.63e-18!172;CL:0002032!1.28e-16!165;CL:0000837!1.28e-16!165;CL:0000988!8.95e-16!182;CL:0000542!1.00e-09!53;CL:0000051!1.00e-09!53;CL:0000838!1.03e-09!52;CL:0000763!5.16e-08!112;CL:0000049!5.16e-08!112;CL:0000945!5.27e-07!24;CL:0000826!5.27e-07!24|ontology_enrichment_celltype_v019=CL:0000860;1.21e-20;33!CL:0002057;1.21e-20;33!CL:0000473;3.32e-19;39!CL:0000234;3.32e-19;39!CL:0000576;1.02e-18;48!CL:0000766;2.76e-12;69!CL:0002087;1.23e-10;104!CL:0000738;2.28e-08;136!CL:0000945;1.41e-07;24|ontology_enrichment_celltype_v019_2=CL:0002087,4.00e-37,115;CL:0000738,5.60e-33,136;CL:0002031,2.40e-31,120;CL:0000473,1.51e-29,48;CL:0000234,1.51e-29,48;CL:0002194,2.17e-29,59;CL:0000576,2.17e-29,59;CL:0000040,2.17e-29,59;CL:0000559,2.17e-29,59;CL:0000860,9.64e-28,42;CL:0002057,9.64e-28,42;CL:0002009,1.27e-27,61;CL:0000766,3.51e-25,72;CL:0000557,1.18e-24,67;CL:0000839,1.40e-24,66;CL:0000037,5.50e-23,168;CL:0002032,5.58e-21,161;CL:0000837,5.58e-21,161;CL:0000988,7.47e-20,177;CL:0000763,1.63e-12,108;CL:0000049,1.63e-12,108;CL:0000838,5.69e-09,52;CL:0000542,1.41e-08,53;CL:0000051,1.41e-08,53;CL:0000945,8.16e-08,24;CL:0000826,8.16e-08,24|ontology_enrichment_development_v019=CL:0002057;5.69e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.94e-25!112;UBERON:0002390!5.38e-23!102;UBERON:0003061!5.38e-23!102;UBERON:0002371!2.09e-17!80;UBERON:0001474!3.23e-14!86;UBERON:0002405!9.54e-14!115;UBERON:0004765!1.18e-13!101;UBERON:0001434!1.18e-13!101;UBERON:0003081!9.66e-08!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.60e-33,108;UBERON:0002390,4.38e-31,98;UBERON:0003061,4.38e-31,98;UBERON:0002405,3.32e-29,93;UBERON:0002371,5.69e-24,76;UBERON:0001474,2.24e-20,82;UBERON:0004765,1.90e-19,90;UBERON:0001434,3.58e-19,100;UBERON:0003081,1.06e-10,203|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,24.7579434623362,17.1590231950387,20.858357048125,10.2274711980715,2.30297638858328,4.4896675761662,0,0.6024118375565,0.369754010166788,5.50017124120142,1.56386155736164,1.76160263600908,1.10799081706375,2.20598892217156,3.90619567288533,8.06095707263728,4.53451132426571,5.6666624879521,2.61716829803216,1.88937971844405,3.15359279544161,3.71886459049095,1.23350366406548,3.09706370895104,44.3046284176112,24.5914278267937,42.0938369201682,12.0660988257816,4.51839278508678,4.06279459783025,4.1413314699373,2.45615535052061,5.16864014223695,34.8935637302829,17.9720255162612,24.9341479061626,36.2836430205388,36.302385687137,32.8193057910174,44.4020135101734,20.425868088881,37.3693349397345,27.6373531782418,27.1171117578505,32.5783267057675,61.7507492686036,38.6691517786943,75.0015858234896,20.7030180585703,20.4100127966442,18.0306435137203,13.9287502621654,16.8198119982487,16.7154610164963,11.4005097496499,14.3220007583345,16.0744455312878,0,7.09980194640771,3.55803701545422,2.56038133539904,4.00395987036012,3.4485146397269,1.98313461835459,5.72432252721218,1.70763890732835,1.17447437874188,0.382273228125229,1.32171328579026,2.24203425192614,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,3.51091640320424,1.30368906653436,0.473447805734733,0,4.34500781852177,3.24066498222321,4.43067789167242,6.77009659412539,3.0741916734162,5.85267064019452,9.53739846701322,6.90875044464621,4.92665245749589,2.07601188426885,1.33770414044857,3.1360657141493,2.60611488204402,1.91610246800961,2.74901956386104,7.08455137654608,1.91139248594458,1.95325036156926,2.85135613334512,3.46322773878877,2.8157054453972,2.49861453104692,3.55165878066025,3.28451198768419,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0,1.0843174571537,1.00267582127178,0.579386075843295,0.795285947051099,0,0,0.221729397462564,0,2.5540919722054,1.45718115317017,0.741568885568859,1.9472843619281,3.83085422058388,5.18536046023574,1.66943437013739,21.7358066096449,1.85728750664782,0.79504962946682,0,1.38856200643038,1.13061588384802,0.838998872419812,1.37559020970034,0.626984899610432,1.29208379584664,4.98072767761394,0.66944122552934,3.22263453687318,1.52054421143703,3.1728067481262,0.367663080345869,2.43042584364528,0.535798369704479,0.44905874525234,0.337834441449967,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4939 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8087 | |||
|TSSclassifier=S | |||
|UniProt=F8W1C5 | |||
|association_with_transcript=0bp_to_ENST00000552756_5end | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_4_at_OAS2_5end | |||
|id=chr12:113416340..113416363,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.25e-31!119;CL:0000738!6.43e-29!140;CL:0002031!1.32e-26!124;CL:0002057!1.48e-22!42;CL:0002194!3.01e-21!63;CL:0000576!3.01e-21!63;CL:0000040!3.01e-21!63;CL:0000559!3.01e-21!63;CL:0000860!1.41e-19!45;CL:0002009!1.48e-19!65;CL:0000766!2.88e-19!76;CL:0000557!1.44e-18!71;CL:0000839!1.70e-18!70;CL:0000037!4.63e-18!172;CL:0000566!4.63e-18!172;CL:0002032!1.28e-16!165;CL:0000837!1.28e-16!165;CL:0000988!8.95e-16!182;CL:0000542!1.00e-09!53;CL:0000051!1.00e-09!53;CL:0000838!1.03e-09!52;CL:0000763!5.16e-08!112;CL:0000049!5.16e-08!112;CL:0000945!5.27e-07!24;CL:0000826!5.27e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-20;33!CL:0002057;1.21e-20;33!CL:0000473;3.32e-19;39!CL:0000234;3.32e-19;39!CL:0000576;1.02e-18;48!CL:0000766;2.76e-12;69!CL:0002087;1.23e-10;104!CL:0000738;2.28e-08;136!CL:0000945;1.41e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.00e-37,115;CL:0000738,5.60e-33,136;CL:0002031,2.40e-31,120;CL:0000473,1.51e-29,48;CL:0000234,1.51e-29,48;CL:0002194,2.17e-29,59;CL:0000576,2.17e-29,59;CL:0000040,2.17e-29,59;CL:0000559,2.17e-29,59;CL:0000860,9.64e-28,42;CL:0002057,9.64e-28,42;CL:0002009,1.27e-27,61;CL:0000766,3.51e-25,72;CL:0000557,1.18e-24,67;CL:0000839,1.40e-24,66;CL:0000037,5.50e-23,168;CL:0002032,5.58e-21,161;CL:0000837,5.58e-21,161;CL:0000988,7.47e-20,177;CL:0000763,1.63e-12,108;CL:0000049,1.63e-12,108;CL:0000838,5.69e-09,52;CL:0000542,1.41e-08,53;CL:0000051,1.41e-08,53;CL:0000945,8.16e-08,24;CL:0000826,8.16e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.69e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.94e-25!112;UBERON:0002390!5.38e-23!102;UBERON:0003061!5.38e-23!102;UBERON:0002371!2.09e-17!80;UBERON:0001474!3.23e-14!86;UBERON:0002405!9.54e-14!115;UBERON:0004765!1.18e-13!101;UBERON:0001434!1.18e-13!101;UBERON:0003081!9.66e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.60e-33,108;UBERON:0002390,4.38e-31,98;UBERON:0003061,4.38e-31,98;UBERON:0002405,3.32e-29,93;UBERON:0002371,5.69e-24,76;UBERON:0001474,2.24e-20,82;UBERON:0004765,1.90e-19,90;UBERON:0001434,3.58e-19,100;UBERON:0003081,1.06e-10,203 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,24.7579434623362,17.1590231950387,20.858357048125,10.2274711980715,2.30297638858328,4.4896675761662,0,0.6024118375565,0.369754010166788,5.50017124120142,1.56386155736164,1.76160263600908,1.10799081706375,2.20598892217156,3.90619567288533,8.06095707263728,4.53451132426571,5.6666624879521,2.61716829803216,1.88937971844405,3.15359279544161,3.71886459049095,1.23350366406548,3.09706370895104,44.3046284176112,24.5914278267937,42.0938369201682,12.0660988257816,4.51839278508678,4.06279459783025,4.1413314699373,2.45615535052061,5.16864014223695,34.8935637302829,17.9720255162612,24.9341479061626,36.2836430205388,36.302385687137,32.8193057910174,44.4020135101734,20.425868088881,37.3693349397345,27.6373531782418,27.1171117578505,32.5783267057675,61.7507492686036,38.6691517786943,75.0015858234896,20.7030180585703,20.4100127966442,18.0306435137203,13.9287502621654,16.8198119982487,16.7154610164963,11.4005097496499,14.3220007583345,16.0744455312878,0,7.09980194640771,3.55803701545422,2.56038133539904,4.00395987036012,3.4485146397269,1.98313461835459,5.72432252721218,1.70763890732835,1.17447437874188,0.382273228125229,1.32171328579026,2.24203425192614,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,3.51091640320424,1.30368906653436,0.473447805734733,0,4.34500781852177,3.24066498222321,4.43067789167242,6.77009659412539,3.0741916734162,5.85267064019452,9.53739846701322,6.90875044464621,4.92665245749589,2.07601188426885,1.33770414044857,3.1360657141493,2.60611488204402,1.91610246800961,2.74901956386104,7.08455137654608,1.91139248594458,1.95325036156926,2.85135613334512,3.46322773878877,2.8157054453972,2.49861453104692,3.55165878066025,3.28451198768419,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0,1.0843174571537,1.00267582127178,0.579386075843295,0.795285947051099,0,0,0.221729397462564,0,2.5540919722054,1.45718115317017,0.741568885568859,1.9472843619281,3.83085422058388,5.18536046023574,1.66943437013739,21.7358066096449,1.85728750664782,0.79504962946682,0,1.38856200643038,1.13061588384802,0.838998872419812,1.37559020970034,0.626984899610432,1.29208379584664,4.98072767761394,0.66944122552934,3.22263453687318,1.52054421143703,3.1728067481262,0.367663080345869,2.43042584364528,0.535798369704479,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,1.06400514659507,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.747243402759005,0,0,0,0.816616685019573,0.122834317311768,0.826606249406124,38.0160914330257,9.1488763833066,1.82032272387605,0,0,0,1.10825646193673,0,1.83892677479412,6.61047459189026,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.969876340912871,0,0,0,2.89891279744945,4.36393792945335,2.29443676311203,0,0,0,0,0,0,18.7739438795779,8.36213219650751,2.76269842704961,0.928735856063958,4.33127689001751,0.354920400119532,0.505754070234305,0.723033089650446,0.441175890929576,0,0,0.134831308160164,0.392442930250692,0,2.21446636387394,0,0,0,0,0,0,0,1.35287282397425,0.171567810298526,0.329250856225877,0,1.80952150340936,2.68506490959736,2.93227474779292,0,0,0,0.117408694235822,12.8486138507356,5.55582615091933,2.28304982681518,0.790204397959275,0.858486162094873,10.3411142556707,6.55211942389866,2.52672975890838,4.68669169933885,13.4385702559088,14.1775097242386,0.179117045405697,0.871901815541886,0,1.47798971368783,0.44024217006613,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,3.81988425558278,9.37739577680376,1.71072446022705,0,3.00343057843917,8.28896654628677,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,1.20575750823834,0,0.499864955910285,8.51366464488333,10.0451418286425,0,0,0,0,1.88215698667853,0.205476322550383,0.179060963239896,1.34502172792233,1.77327684181734,0.862510299438069,1.66845947163673,0,0,0,0.167516265334349,0,0.749007023947182,0,7.87389475528467,0,0,0,0,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0.521301686808497,0.783204629850962,0.686286847621712,5.58273670531796,5.82428342210265,3.73546452312055,0,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0,0,5.5515489768956,1.42049380250502,2.46381468041427,11.4235974420397,3.1376802184189,0,1.00253235151642,0.0920809889358963,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0.211103257785751,1.13733384070897,1.53084334748864,0.863663664408557,0,0,0,1.01950509218015,0,0,0,0,0,0,0,2.7821073144885,0,0,5.74265537996172,0.650060246036521,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0,0.290033387828457,0,0.0890320356467374,0,0.576570202095319,0.638063562472921,0,0,0,0.6970372701606,40.3523990030676,1.59691809095107,0,0.18532421910392,0.572499546967965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| |||
|short_description=p4@OAS2 | |||
}} |
Revision as of 20:58, 10 September 2013
Short description: | p4@OAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_OAS2_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000552756_5end |
EntrezGene: | OAS2 |
HGNC: | 8087 |
UniProt: | F8W1C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.00e-37 | 115 |
leukocyte | 5.60e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 2.40e-31 | 120 |
defensive cell | 1.51e-29 | 48 |
phagocyte | 1.51e-29 | 48 |
monopoietic cell | 2.17e-29 | 59 |
monocyte | 2.17e-29 | 59 |
monoblast | 2.17e-29 | 59 |
promonocyte | 2.17e-29 | 59 |
classical monocyte | 9.64e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.64e-28 | 42 |
macrophage dendritic cell progenitor | 1.27e-27 | 61 |
myeloid leukocyte | 3.51e-25 | 72 |
granulocyte monocyte progenitor cell | 1.18e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.40e-24 | 66 |
hematopoietic stem cell | 5.50e-23 | 168 |
hematopoietic oligopotent progenitor cell | 5.58e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.58e-21 | 161 |
hematopoietic cell | 7.47e-20 | 177 |
myeloid cell | 1.63e-12 | 108 |
common myeloid progenitor | 1.63e-12 | 108 |
lymphoid lineage restricted progenitor cell | 5.69e-09 | 52 |
lymphocyte | 1.41e-08 | 53 |
common lymphoid progenitor | 1.41e-08 | 53 |
lymphocyte of B lineage | 8.16e-08 | 24 |
pro-B cell | 8.16e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.60e-33 | 108 |
hematopoietic system | 4.38e-31 | 98 |
blood island | 4.38e-31 | 98 |
immune system | 3.32e-29 | 93 |
bone marrow | 5.69e-24 | 76 |
bone element | 2.24e-20 | 82 |
skeletal element | 1.90e-19 | 90 |
skeletal system | 3.58e-19 | 100 |
lateral plate mesoderm | 1.06e-10 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.