FFCP PHASE1:Hg19::chr12:111512511..111512523,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr12:111512511..111512523,+|id=chr12:111512511..111512523,+|ontology_enrichment_celltype=CL:0000840!1.68e-16!5;CL:0001029!1.68e-16!5;CL:0000451!1.12e-13!10;CL:0000990!4.79e-11!8;CL:0000784!4.79e-09!3;CL:0000181!2.30e-08!12;CL:0000417!2.30e-08!12;CL:0000668!2.30e-08!12;CL:0000414!2.30e-08!12;CL:0000412!2.30e-08!12;CL:0000182!2.30e-08!12|ontology_enrichment_celltype_v019=CL:0000182;1.03e-15;12!CL:0000840;4.84e-14;5!CL:0000990;1.10e-09;8!CL:0000451;4.34e-08;10|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12;CL:0000840,4.84e-14,5;CL:0001029,4.84e-14,5;CL:0000990,1.10e-09,8;CL:0000451,4.34e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!9.73e-14!26;UBERON:0004733!5.84e-12!12;UBERON:0002028!5.84e-12!12;UBERON:0007277!5.84e-12!12;UBERON:0004732!5.03e-11!13;UBERON:0003076!1.58e-09!15;UBERON:0003057!1.58e-09!15;UBERON:0001896!1.39e-08!3;UBERON:0005290!1.39e-08!3;UBERON:0010096!1.39e-08!3;UBERON:0004177!4.03e-08!7;UBERON:0002107!6.27e-08!19;UBERON:0006925!6.27e-08!19;UBERON:0008836!6.27e-08!19;UBERON:0002368!1.21e-07!35;UBERON:0002298!5.51e-07!8;UBERON:0002336!6.57e-07!1;UBERON:0001018!6.57e-07!1;UBERON:0002473!6.57e-07!1;UBERON:0005340!6.57e-07!1;UBERON:0002316!6.57e-07!1;UBERON:0003544!6.57e-07!1;UBERON:0001020!6.57e-07!1;UBERON:0005970!6.57e-07!1;UBERON:0002437!6.57e-07!1;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1;UBERON:0008835!8.29e-07!22;UBERON:0003894!8.29e-07!22;UBERON:0002370!8.85e-07!4;UBERON:0005058!8.85e-07!4;UBERON:0009113!8.85e-07!4;UBERON:0003295!8.85e-07!4;UBERON:0005562!8.85e-07!4|ontology_enrichment_uberon_v019=UBERON:0002107;2.87e-17;19!UBERON:0006925;2.87e-17;19!UBERON:0002423;3.17e-13;25!UBERON:0002365;4.40e-11;31!UBERON:0002330;4.40e-11;31!UBERON:0002368;5.36e-09;33!UBERON:0000949;1.31e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.93e-17,19;UBERON:0006925,2.93e-17,19;UBERON:0008836,2.93e-17,19;UBERON:0008835,5.77e-15,22;UBERON:0003894,5.77e-15,22;UBERON:0009854,2.48e-14,23;UBERON:0007499,3.22e-13,25;UBERON:0009497,3.22e-13,25;UBERON:0000015,3.22e-13,25;UBERON:0002423,3.22e-13,25;UBERON:0006235,3.22e-13,25;UBERON:0004161,3.22e-13,25;UBERON:0009856,1.00e-12,26;UBERON:0002365,9.89e-11,31;UBERON:0002330,9.89e-11,31;UBERON:0002368,1.53e-09,35;UBERON:0000949,1.73e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,1.21890816109487,0.26591592103773,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,9.82827216677626,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.02520324971387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3534773196507,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:111512511..111512523,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:111512511..111512523,+ | |||
|id=chr12:111512511..111512523,+ | |||
|ontology_enrichment_celltype=CL:0000840!1.68e-16!5;CL:0001029!1.68e-16!5;CL:0000451!1.12e-13!10;CL:0000990!4.79e-11!8;CL:0000784!4.79e-09!3;CL:0000181!2.30e-08!12;CL:0000417!2.30e-08!12;CL:0000668!2.30e-08!12;CL:0000414!2.30e-08!12;CL:0000412!2.30e-08!12;CL:0000182!2.30e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.03e-15;12!CL:0000840;4.84e-14;5!CL:0000990;1.10e-09;8!CL:0000451;4.34e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12;CL:0000840,4.84e-14,5;CL:0001029,4.84e-14,5;CL:0000990,1.10e-09,8;CL:0000451,4.34e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!9.73e-14!26;UBERON:0004733!5.84e-12!12;UBERON:0002028!5.84e-12!12;UBERON:0007277!5.84e-12!12;UBERON:0004732!5.03e-11!13;UBERON:0003076!1.58e-09!15;UBERON:0003057!1.58e-09!15;UBERON:0001896!1.39e-08!3;UBERON:0005290!1.39e-08!3;UBERON:0010096!1.39e-08!3;UBERON:0004177!4.03e-08!7;UBERON:0002107!6.27e-08!19;UBERON:0006925!6.27e-08!19;UBERON:0008836!6.27e-08!19;UBERON:0002368!1.21e-07!35;UBERON:0002298!5.51e-07!8;UBERON:0002336!6.57e-07!1;UBERON:0001018!6.57e-07!1;UBERON:0002473!6.57e-07!1;UBERON:0005340!6.57e-07!1;UBERON:0002316!6.57e-07!1;UBERON:0003544!6.57e-07!1;UBERON:0001020!6.57e-07!1;UBERON:0005970!6.57e-07!1;UBERON:0002437!6.57e-07!1;UBERON:0001882!6.97e-07!1;UBERON:0005403!6.97e-07!1;UBERON:0008835!8.29e-07!22;UBERON:0003894!8.29e-07!22;UBERON:0002370!8.85e-07!4;UBERON:0005058!8.85e-07!4;UBERON:0009113!8.85e-07!4;UBERON:0003295!8.85e-07!4;UBERON:0005562!8.85e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.87e-17;19!UBERON:0006925;2.87e-17;19!UBERON:0002423;3.17e-13;25!UBERON:0002365;4.40e-11;31!UBERON:0002330;4.40e-11;31!UBERON:0002368;5.36e-09;33!UBERON:0000949;1.31e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.93e-17,19;UBERON:0006925,2.93e-17,19;UBERON:0008836,2.93e-17,19;UBERON:0008835,5.77e-15,22;UBERON:0003894,5.77e-15,22;UBERON:0009854,2.48e-14,23;UBERON:0007499,3.22e-13,25;UBERON:0009497,3.22e-13,25;UBERON:0000015,3.22e-13,25;UBERON:0002423,3.22e-13,25;UBERON:0006235,3.22e-13,25;UBERON:0004161,3.22e-13,25;UBERON:0009856,1.00e-12,26;UBERON:0002365,9.89e-11,31;UBERON:0002330,9.89e-11,31;UBERON:0002368,1.53e-09,35;UBERON:0000949,1.73e-07,45 | |||
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|short_description=p@chr12:111512511..111512523,+ | |||
}} |
Revision as of 20:53, 10 September 2013
Short description: | p@chr12:111512511..111512523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111512511..111512523, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
immature conventional dendritic cell | 4.84e-14 | 5 |
common dendritic progenitor | 4.84e-14 | 5 |
conventional dendritic cell | 1.10e-09 | 8 |
dendritic cell | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 2.93e-17 | 19 |
digestive gland | 2.93e-17 | 19 |
liver bud | 2.93e-17 | 19 |
hepatic diverticulum | 5.77e-15 | 22 |
liver primordium | 5.77e-15 | 22 |
digestive tract diverticulum | 2.48e-14 | 23 |
epithelial sac | 3.22e-13 | 25 |
epithelium of foregut-midgut junction | 3.22e-13 | 25 |
anatomical boundary | 3.22e-13 | 25 |
hepatobiliary system | 3.22e-13 | 25 |
foregut-midgut junction | 3.22e-13 | 25 |
septum transversum | 3.22e-13 | 25 |
sac | 1.00e-12 | 26 |
exocrine gland | 9.89e-11 | 31 |
exocrine system | 9.89e-11 | 31 |
endocrine gland | 1.53e-09 | 35 |
endocrine system | 1.73e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.