FFCP PHASE1:Hg19::chr12:111099305..111099321,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C74|description=CAGE_peak_at_chr12:111099305..111099321,-|id=chr12:111099305..111099321,-|ontology_enrichment_celltype=CL:0000037!5.14e-33!172;CL:0000566!5.14e-33!172;CL:0002032!3.25e-31!165;CL:0000837!3.25e-31!165;CL:0000988!1.19e-30!182;CL:0000945!8.72e-29!24;CL:0000826!8.72e-29!24;CL:0000738!2.96e-25!140;CL:0002031!3.99e-24!124;CL:0002087!6.16e-24!119;CL:0000542!7.87e-19!53;CL:0000051!7.87e-19!53;CL:0000838!5.63e-17!52;CL:0000763!1.66e-13!112;CL:0000049!1.66e-13!112;CL:0000134!1.32e-10!358;CL:0002320!3.28e-10!365;CL:0000236!2.59e-09!14;CL:0000839!3.49e-09!70;CL:0000557!5.24e-09!71;CL:0000219!8.10e-09!390;CL:0000785!1.07e-08!2;CL:0000955!1.07e-08!2;CL:0000818!1.07e-08!2;CL:0000954!1.07e-08!2;CL:0000816!1.07e-08!2;CL:0000766!3.40e-08!76;CL:0000048!8.17e-08!430;CL:0000723!1.44e-07!436;CL:0000034!3.00e-07!444;CL:0002194!8.70e-07!63;CL:0000576!8.70e-07!63;CL:0000040!8.70e-07!63;CL:0000559!8.70e-07!63|ontology_enrichment_celltype_v019=CL:0000945;1.72e-44;24!CL:0000542;2.99e-11;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.51e-44,24;CL:0000826,1.51e-44,24;CL:0000838,1.33e-20,52;CL:0000542,3.25e-20,53;CL:0000051,3.25e-20,53;CL:0002087,6.21e-12,115;CL:0002031,1.98e-11,120;CL:0000738,4.57e-10,136;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000037,4.20e-08,168;CL:0000988,1.12e-07,177|ontology_enrichment_development_v019=CL:0000051;2.99e-11;53|ontology_enrichment_disease=DOID:2531!1.44e-14!51;DOID:0060083!1.44e-14!51;DOID:0060058!1.26e-09!10;DOID:1240!8.10e-09!39;DOID:8692!1.01e-07!31|ontology_enrichment_disease_v019=DOID:630;1.33e-23;1!DOID:0050177;1.33e-23;1!DOID:0050427;1.33e-23;1!DOID:0060058;1.57e-20;10|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1;DOID:0060058,1.37e-20,10|ontology_enrichment_uberon=UBERON:0002106!1.35e-11!3;UBERON:0004854!1.35e-11!3;UBERON:0009034!1.35e-11!3;UBERON:0002095!1.35e-11!3;UBERON:0004782!1.35e-11!3;UBERON:0003281!1.35e-11!3;UBERON:0009664!1.35e-11!3;UBERON:0002296!1.35e-11!3;UBERON:0005602!1.35e-11!3;UBERON:0001179!1.35e-11!3;UBERON:0006293!1.35e-11!3;UBERON:0002390!2.35e-11!102;UBERON:0003061!2.35e-11!102;UBERON:0002193!4.92e-11!112;UBERON:0002384!1.14e-09!375;UBERON:0002405!1.59e-09!115;UBERON:0002371!9.00e-09!80;UBERON:0004177!2.54e-08!7;UBERON:0001474!6.55e-08!86|ontology_enrichment_uberon_v019=UBERON:0002106;8.31e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.80621296789881,1.96776953284198,0,0,0,0,0,0,1.78174561334694,1.84820002233648,0.293600439334847,0,0,0,0,0.971680998056939,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr12:111099305..111099321,- | |||
|id=chr12:111099305..111099321,- | |||
|ontology_enrichment_celltype=CL:0000037!5.14e-33!172;CL:0000566!5.14e-33!172;CL:0002032!3.25e-31!165;CL:0000837!3.25e-31!165;CL:0000988!1.19e-30!182;CL:0000945!8.72e-29!24;CL:0000826!8.72e-29!24;CL:0000738!2.96e-25!140;CL:0002031!3.99e-24!124;CL:0002087!6.16e-24!119;CL:0000542!7.87e-19!53;CL:0000051!7.87e-19!53;CL:0000838!5.63e-17!52;CL:0000763!1.66e-13!112;CL:0000049!1.66e-13!112;CL:0000134!1.32e-10!358;CL:0002320!3.28e-10!365;CL:0000236!2.59e-09!14;CL:0000839!3.49e-09!70;CL:0000557!5.24e-09!71;CL:0000219!8.10e-09!390;CL:0000785!1.07e-08!2;CL:0000955!1.07e-08!2;CL:0000818!1.07e-08!2;CL:0000954!1.07e-08!2;CL:0000816!1.07e-08!2;CL:0000766!3.40e-08!76;CL:0000048!8.17e-08!430;CL:0000723!1.44e-07!436;CL:0000034!3.00e-07!444;CL:0002194!8.70e-07!63;CL:0000576!8.70e-07!63;CL:0000040!8.70e-07!63;CL:0000559!8.70e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.72e-44;24!CL:0000542;2.99e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.51e-44,24;CL:0000826,1.51e-44,24;CL:0000838,1.33e-20,52;CL:0000542,3.25e-20,53;CL:0000051,3.25e-20,53;CL:0002087,6.21e-12,115;CL:0002031,1.98e-11,120;CL:0000738,4.57e-10,136;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000037,4.20e-08,168;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.99e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!1.44e-14!51;DOID:0060083!1.44e-14!51;DOID:0060058!1.26e-09!10;DOID:1240!8.10e-09!39;DOID:8692!1.01e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:630;1.33e-23;1!DOID:0050177;1.33e-23;1!DOID:0050427;1.33e-23;1!DOID:0060058;1.57e-20;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1;DOID:0060058,1.37e-20,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.35e-11!3;UBERON:0004854!1.35e-11!3;UBERON:0009034!1.35e-11!3;UBERON:0002095!1.35e-11!3;UBERON:0004782!1.35e-11!3;UBERON:0003281!1.35e-11!3;UBERON:0009664!1.35e-11!3;UBERON:0002296!1.35e-11!3;UBERON:0005602!1.35e-11!3;UBERON:0001179!1.35e-11!3;UBERON:0006293!1.35e-11!3;UBERON:0002390!2.35e-11!102;UBERON:0003061!2.35e-11!102;UBERON:0002193!4.92e-11!112;UBERON:0002384!1.14e-09!375;UBERON:0002405!1.59e-09!115;UBERON:0002371!9.00e-09!80;UBERON:0004177!2.54e-08!7;UBERON:0001474!6.55e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.80621296789881,1.96776953284198,0,0,0,0,0,0,1.78174561334694,1.84820002233648,0.293600439334847,0,0,0,0,0.971680998056939,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,6.39623397919545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586 | |||
|short_description=p@chr12:111099305..111099321,- | |||
}} |
Revision as of 20:51, 10 September 2013
Short description: | p@chr12:111099305..111099321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111099305..111099321, - |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.51e-44 | 24 |
pro-B cell | 1.51e-44 | 24 |
lymphoid lineage restricted progenitor cell | 1.33e-20 | 52 |
lymphocyte | 3.25e-20 | 53 |
common lymphoid progenitor | 3.25e-20 | 53 |
nongranular leukocyte | 6.21e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-11 | 120 |
leukocyte | 4.57e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.82e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-08 | 161 |
hematopoietic stem cell | 4.20e-08 | 168 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-23 | 1 |
monogenic disease | 1.34e-23 | 1 |
xeroderma pigmentosum | 1.34e-23 | 1 |
lymphoma | 1.37e-20 | 10 |
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