FFCP PHASE1:Hg19::chr12:109251373..109251417,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54434|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30579|TSSclassifier=S|UniProt=Q8WYL5|association_with_transcript=-7bp_to_ENST00000326495,ENST00000551165_5end|description=CAGE_peak_2_at_SSH1_5end|id=chr12:109251373..109251417,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=3.45188920614058,3.63970890614671,3.38290569830331,2.00146596706261,1.34088328328186,4.36169262050184,0,0,2.08948502559871,3.93174298402414,2.79120467188971,2.83973783769224,2.37390280405608,2.35156070624089,3.64537113300707,2.01697543935533,1.20538905604795,1.46062018077475,1.46379839637152,1.72369481307503,4.89601658986207,3.13454721478088,2.57612388417951,3.55873505189499,6.27713197974014,2.9801228241701,3.36612416744778,2.99100968991981,4.32700704533794,3.83829398097213,5.57338043937874,4.59710612239464,6.92773613189975,2.9580320813343,0.852139206383318,1.84820002233648,1.46800219667424,8.30993112797816,9.42558903109666,12.1526087600877,3.80656306207871,2.59114932815184,3.8636335145128,4.79814187972564,2.64513160582167,3.88134497900506,4.64858073811369,6.57868620834921,2.16794459626573,4.89077066947656,5.37937483711111,2.60130452877444,3.44745680736619,5.16387746867061,4.06279459783025,5.27078550719293,3.27487380069415,2.47195832889593,7.65209730927256,3.85114832491312,3.83602275479425,5.27762080298746,4.3882004676759,5.11469700639233,3.19230162491442,5.6738522469114,3.73693349397345,3.26623264833766,5.21482918420201,4.99534342821768,2.42159801053347,1.47311054395026,2.53169909952708,1.90129757680748,3.18906449947565,1.25795187305026,2.13424399178341,2.70318407114711,3.85741408072992,3.99017841237748,1.9891667719909,0.91332076882317,1.75996244461323,3.82297027883492,0.889509253863555,2.56038133539904,2.40237592221607,1.14950487990897,3.30522436392431,0,1.70763890732835,2.34894875748376,4.58727873750275,3.96513985737078,1.68152568894461,1.31692042387539,2.55722701147983,2.75107533924415,5.14003747498773,1.33749196312542,1.95553359980154,2.8406868344084,1.94826728407911,3.11949279278486,2.06224135232386,1.10766947291811,0.812411591295047,4.86747014957566,3.25148368899696,1.31550323682941,1.93445012450094,0.579606171470105,1.18629250529648,0.535081656179426,1.04535523804977,2.15287751125376,1.91610246800961,1.03088233644789,1.26509846009751,1.27426165729639,1.30216690771284,4.75226022224187,0.903450714466637,2.17577238962511,1.24930726552346,1.89421801635213,2.46338399076314,4.83856183739358,5.34880391567015,5.64815175142916,4.87613732627923,2.01210257911091,2.17366355134002,2.89151321907653,4.51204119572301,2.60723734129483,4.7717156823066,7.29952305453954,2.45790524626576,2.21729397462564,4.83091321312193,3.07800827419625,4.00724817121796,4.07862887062872,2.59637914923747,4.00498395788315,4.25465473660369,4.5313218618015,4.0039643754609,0.74291500265913,2.38514888840046,2.58070378531837,2.08284300964557,1.13061588384802,1.67799774483962,2.20094433552054,1.46296476575767,3.35941786920128,2.13459757612026,2.00832367658802,1.61131726843659,1.52054421143703,1.46437234528902,1.10298924103761,0.81014194788176,1.25019619597712,3.59246996201872,4.39184773884957,3.06633274931766,2.84779697870439,2.19842092716489,9.22462922052443,11.6334079244498,6.10531672999548,4.47274756525787,4.55869841992487,4.76673050927588,2.86836620748814,6.02936249737207,3.92474320099615,4.2699598291882,2.96001058100592,2.8008993185979,2.55950276932407,1.47115712802113,1.81628913173918,3.45705554687999,3.04617861383936,1.5608003841516,1.71141546463335,3.28787097213962,2.70099346880659,2.10434827678571,2.94946694074722,5.30800845262722,5.15904132709426,5.26961483996404,4.75201142912821,4.94533858557114,0.910161361938026,4.31170885089743,4.88174730466792,5.50521487436642,6.64953877162039,3.5118209670467,4.59731693698529,7.21142682751665,3.17610112848059,1.97328599257748,2.98980344345994,5.29829752898905,1.20036438433761,1.95799805553034,1.8034837803194,4.46680455195816,2.70042131586026,1.94874010322397,1.7670364197088,4.51044503347267,0.969876340912871,2.13005755509969,2.21654616100809,3.39121184620975,2.12586938479627,2.45471508531751,3.15485054927904,1.21973706129595,1.45782745153634,1.74290914304278,1.7622379352613,1.7662459561294,1.09493207722749,7.8224766164908,1.92972281457866,9.66944449467364,1.39310378409594,1.44375896333917,0.591534000199219,0.842923450390509,0.723033089650446,1.10293972732394,1.08939722046203,0.71181185733329,0.808987848960987,0.98110732562673,0.38474715694639,2.21446636387394,4.20725321410337,3.7041661019826,7.3504355692771,2.53510069643662,0.982827216677626,1.18157981336281,1.7658523976586,1.22988438543114,1.3725424823882,2.63400684980701,1.1240175325762,4.2222168412885,4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137,4.03732559472253,0.98339014767326,2.53397002022874,2.34574308406558,1.06886962106224,0.827054095813604,1.0028301571695,2.5006970412019,2.41167717140561,0.829169439458779,3.93045384275202,3.41174371041569,5.71354635512977,0.968833647540092,2.04846557176331,3.25182401483779,1.2729431655633,3.63810940124795,2.17716747896961,4.79126621519393,3.43495470374396,2.07994395638761,2.66128285236811,1.62806537221949,4.48254852686405,11.5843369372164,4.22178449900958,4.69281884806909,3.05603610457166,7.32413120968329,3.99454064511308,2.21401172950129,1.9234109538194|short_description=p2@SSH1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30579 | |||
|TSSclassifier=S | |||
|UniProt=Q8WYL5 | |||
|association_with_transcript=-7bp_to_ENST00000326495,ENST00000551165_5end | |||
|description=CAGE_peak_2_at_SSH1_5end | |||
|id=chr12:109251373..109251417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SSH1 | |||
}} |
Revision as of 20:45, 10 September 2013
Short description: | p2@SSH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SSH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000326495, ENST00000551165_5end |
EntrezGene: | SSH1 |
HGNC: | 30579 |
UniProt: | Q8WYL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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