FFCP PHASE1:Hg19::chr12:109232435..109232456,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:109232435..109232456,+|id=chr12:109232435..109232456,+|ontology_enrichment_celltype=CL:0002057!1.37e-19!42;CL:0000860!6.06e-19!45;CL:0000723!7.43e-15!436;CL:0000034!7.75e-15!444;CL:0000048!8.27e-15!430;CL:0002371!3.53e-13!591;CL:0002320!4.05e-12!365;CL:0000144!1.21e-11!625;CL:0000134!4.24e-11!358;CL:0000766!1.16e-10!76;CL:0000839!5.55e-10!70;CL:0002194!6.74e-10!63;CL:0000576!6.74e-10!63;CL:0000040!6.74e-10!63;CL:0000559!6.74e-10!63;CL:0000557!1.19e-09!71;CL:0000219!1.83e-09!390;CL:0002009!3.28e-09!65;CL:0000012!1.68e-08!682;CL:0000548!8.58e-08!679;CL:0000004!8.58e-08!679;CL:0000255!8.58e-08!679|ontology_enrichment_celltype_v019=CL:0000860;1.38e-26;33!CL:0002057;1.38e-26;33!CL:0000473;9.62e-18;39!CL:0000234;9.62e-18;39!CL:0000576;1.27e-15;48!CL:0000766;6.99e-13;69!CL:0000569;4.74e-10;4!CL:0000767;3.08e-08;3!CL:0002559;1.26e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,5.82e-29,42;CL:0002057,5.82e-29,42;CL:0000473,2.07e-24,48;CL:0000234,2.07e-24,48;CL:0000766,2.94e-21,72;CL:0000839,1.86e-18,66;CL:0002194,4.46e-18,59;CL:0000576,4.46e-18,59;CL:0000040,4.46e-18,59;CL:0000559,4.46e-18,59;CL:0000557,4.50e-18,67;CL:0000134,1.38e-17,354;CL:0002009,2.89e-17,61;CL:0000034,4.39e-17,441;CL:0002320,6.73e-17,361;CL:0000723,5.07e-16,433;CL:0000048,8.56e-16,427;CL:0000219,1.74e-14,386;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0000569,3.70e-10,4;CL:0000011,3.70e-10,4;CL:0000738,5.07e-09,136;CL:0002031,1.63e-08,120;CL:0000767,1.93e-08,3;CL:0002087,1.32e-07,115;CL:0002559,1.40e-07,5|ontology_enrichment_development_v019=CL:0002057;6.56e-21;42!CL:0000011;4.74e-10;4|ontology_enrichment_disease=DOID:2394!4.40e-08!14|ontology_enrichment_disease_v019=DOID:2394;1.51e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,8.31e-10,14|ontology_enrichment_uberon=UBERON:0002204!2.23e-15!167;UBERON:0004765!1.22e-12!101;UBERON:0001434!1.22e-12!101;UBERON:0002384!7.36e-12!375;UBERON:0002371!1.72e-10!80;UBERON:0001474!1.90e-10!86;UBERON:0002390!7.51e-08!102;UBERON:0003061!7.51e-08!102;UBERON:0002405!1.52e-07!115;UBERON:0002193!2.06e-07!112;UBERON:0000914!2.65e-07!83;UBERON:0002329!2.65e-07!83;UBERON:0003077!2.65e-07!83;UBERON:0003059!2.65e-07!83;UBERON:0007282!2.65e-07!83;UBERON:0009618!2.65e-07!83;UBERON:0007285!2.65e-07!83|ontology_enrichment_uberon_v019=UBERON:0002118;3.66e-08;5!UBERON:0002073;1.26e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-19,76;UBERON:0001474,9.15e-19,82;UBERON:0002384,1.08e-16,371;UBERON:0004765,2.36e-16,90;UBERON:0001434,5.59e-15,100;UBERON:0002405,2.30e-14,93;UBERON:0002390,3.13e-13,98;UBERON:0003061,3.13e-13,98;UBERON:0002193,2.72e-11,108;UBERON:0002204,8.98e-10,167;UBERON:0002118,2.29e-08,5;UBERON:0003081,6.70e-08,203;UBERON:0000926,9.30e-08,315;UBERON:0004120,9.30e-08,315;UBERON:0006603,9.30e-08,315;UBERON:0002073,1.40e-07,5;UBERON:0005086,1.40e-07,5|phase1_expression=0,0,0.281908808191942,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,10.6208354749204,1.91914699048606,10.8371286321253,0,0,0.739508020333575,0,0,0,11.0799081706375,3.00816671205213,2.82114131930607,0,0,0,0.290796477559129,0.377875943688809,0.970336244751265,0.697287110717054,1.6446715520873,3.09706370895104,2.8769239232215,5.63553554364021,10.1687358852092,4.13694816883942,0.645484683583826,1.35426486594342,1.88242339542605,0.818718450173537,2.9214052977861,5.20342617030534,4.49300637906531,1.91801137739712,1.31940520074686,2.59302754908121,2.98357325372886,0.580418477257168,1.13477044938228,0.622822248995575,4.27122730936464,2.60741459210101,5.2125322729228,0,1.47311054395026,2.53169909952708,0.211255286311942,0,0.419317291016752,1.12328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,3.36305137788922,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.511450247374121,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.759783069987479,12.4464629964426,2.58152958673932,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,1.1409436430889,1.04614076386261,0,0.161872944368132,0.280901613404497,0.204154171254893,0,0,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0,0.150238058906597,0.794025282120147,2.33206526395521,0,0,0,0,3.09168648054755,0.18611685633159,0.675105328965065,0,2.52433774244115,0.184099797284599,0,4.26011511019937,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,4.6436792803197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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:109232435..109232456,+ | |||
|id=chr12:109232435..109232456,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-19!42;CL:0000860!6.06e-19!45;CL:0000723!7.43e-15!436;CL:0000034!7.75e-15!444;CL:0000048!8.27e-15!430;CL:0002371!3.53e-13!591;CL:0002320!4.05e-12!365;CL:0000144!1.21e-11!625;CL:0000134!4.24e-11!358;CL:0000766!1.16e-10!76;CL:0000839!5.55e-10!70;CL:0002194!6.74e-10!63;CL:0000576!6.74e-10!63;CL:0000040!6.74e-10!63;CL:0000559!6.74e-10!63;CL:0000557!1.19e-09!71;CL:0000219!1.83e-09!390;CL:0002009!3.28e-09!65;CL:0000012!1.68e-08!682;CL:0000548!8.58e-08!679;CL:0000004!8.58e-08!679;CL:0000255!8.58e-08!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-26;33!CL:0002057;1.38e-26;33!CL:0000473;9.62e-18;39!CL:0000234;9.62e-18;39!CL:0000576;1.27e-15;48!CL:0000766;6.99e-13;69!CL:0000569;4.74e-10;4!CL:0000767;3.08e-08;3!CL:0002559;1.26e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.82e-29,42;CL:0002057,5.82e-29,42;CL:0000473,2.07e-24,48;CL:0000234,2.07e-24,48;CL:0000766,2.94e-21,72;CL:0000839,1.86e-18,66;CL:0002194,4.46e-18,59;CL:0000576,4.46e-18,59;CL:0000040,4.46e-18,59;CL:0000559,4.46e-18,59;CL:0000557,4.50e-18,67;CL:0000134,1.38e-17,354;CL:0002009,2.89e-17,61;CL:0000034,4.39e-17,441;CL:0002320,6.73e-17,361;CL:0000723,5.07e-16,433;CL:0000048,8.56e-16,427;CL:0000219,1.74e-14,386;CL:0000763,1.69e-11,108;CL:0000049,1.69e-11,108;CL:0000569,3.70e-10,4;CL:0000011,3.70e-10,4;CL:0000738,5.07e-09,136;CL:0002031,1.63e-08,120;CL:0000767,1.93e-08,3;CL:0002087,1.32e-07,115;CL:0002559,1.40e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.56e-21;42!CL:0000011;4.74e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!4.40e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.51e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.31e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.23e-15!167;UBERON:0004765!1.22e-12!101;UBERON:0001434!1.22e-12!101;UBERON:0002384!7.36e-12!375;UBERON:0002371!1.72e-10!80;UBERON:0001474!1.90e-10!86;UBERON:0002390!7.51e-08!102;UBERON:0003061!7.51e-08!102;UBERON:0002405!1.52e-07!115;UBERON:0002193!2.06e-07!112;UBERON:0000914!2.65e-07!83;UBERON:0002329!2.65e-07!83;UBERON:0003077!2.65e-07!83;UBERON:0003059!2.65e-07!83;UBERON:0007282!2.65e-07!83;UBERON:0009618!2.65e-07!83;UBERON:0007285!2.65e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;3.66e-08;5!UBERON:0002073;1.26e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-19,76;UBERON:0001474,9.15e-19,82;UBERON:0002384,1.08e-16,371;UBERON:0004765,2.36e-16,90;UBERON:0001434,5.59e-15,100;UBERON:0002405,2.30e-14,93;UBERON:0002390,3.13e-13,98;UBERON:0003061,3.13e-13,98;UBERON:0002193,2.72e-11,108;UBERON:0002204,8.98e-10,167;UBERON:0002118,2.29e-08,5;UBERON:0003081,6.70e-08,203;UBERON:0000926,9.30e-08,315;UBERON:0004120,9.30e-08,315;UBERON:0006603,9.30e-08,315;UBERON:0002073,1.40e-07,5;UBERON:0005086,1.40e-07,5 | |||
|phase1_expression=0,0,0.281908808191942,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,10.6208354749204,1.91914699048606,10.8371286321253,0,0,0.739508020333575,0,0,0,11.0799081706375,3.00816671205213,2.82114131930607,0,0,0,0.290796477559129,0.377875943688809,0.970336244751265,0.697287110717054,1.6446715520873,3.09706370895104,2.8769239232215,5.63553554364021,10.1687358852092,4.13694816883942,0.645484683583826,1.35426486594342,1.88242339542605,0.818718450173537,2.9214052977861,5.20342617030534,4.49300637906531,1.91801137739712,1.31940520074686,2.59302754908121,2.98357325372886,0.580418477257168,1.13477044938228,0.622822248995575,4.27122730936464,2.60741459210101,5.2125322729228,0,1.47311054395026,2.53169909952708,0.211255286311942,0,0.419317291016752,1.12328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,3.36305137788922,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.511450247374121,0,0,0,0,1.45990461090791,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.759783069987479,12.4464629964426,2.58152958673932,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,1.1409436430889,1.04614076386261,0,0.161872944368132,0.280901613404497,0.204154171254893,0,0,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0,0.150238058906597,0.794025282120147,2.33206526395521,0,0,0,0,3.09168648054755,0.18611685633159,0.675105328965065,0,2.52433774244115,0.184099797284599,0,4.26011511019937,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,4.64367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0.370353780634118,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,2.90259361757081,0.864719720501769,1.2624243342638,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.560655421726804,0,0.1466765716419,0,0,0,0,0,0,0,0,1.42977993658148,0,0,0.977208552881205,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0.716243852959582,0,1.57624608161542,0.646882724578552,1.15508732651774,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.587403472388222,0,0.620304078368662,0.647142602455851,0.853820462427555,0.303127571446259,0,0.30239029332968,0,1.84154367945675,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0.771048469013278,2.84098760501003,3.20295908453856,0.519254429183621,2.20799719073923,0,0,0,0,0,0,0,0.385076685522074,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.976135183992909,0,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0.308097234229289,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,1.40373983744043,0,0,7.870308670766,0.6970372701606,0,1.59691809095107,0.869932992075073,1.29726953372744,0.715624433709956,0.744316738719335,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.808729926293264,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,1.9676842561399,0.202910376962704,0,0,2.00775893085672,0.0982490410131212,0.7133421029625,0.354761064070598,1.26664581178598,0.658589785919804,0,0.349934720244983,0.192444225451024,2.01090682660736,0,0.188287601553558,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.83654246567162,0.461701551022782,1.02547850262301,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0.391969589657511,0.261177619741208,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0.387848869084652,0,0,0,0,0.471612915298998,0,0,0,0,0,1.08803560673895,0.7520696820681,0.612691153526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| |||
|short_description=p@chr12:109232435..109232456,+ | |||
}} |
Revision as of 20:44, 10 September 2013
Short description: | p@chr12:109232435..109232456, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109232435..109232456, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.82e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.82e-29 | 42 |
defensive cell | 2.07e-24 | 48 |
phagocyte | 2.07e-24 | 48 |
myeloid leukocyte | 2.94e-21 | 72 |
myeloid lineage restricted progenitor cell | 1.86e-18 | 66 |
monopoietic cell | 4.46e-18 | 59 |
monocyte | 4.46e-18 | 59 |
monoblast | 4.46e-18 | 59 |
promonocyte | 4.46e-18 | 59 |
granulocyte monocyte progenitor cell | 4.50e-18 | 67 |
mesenchymal cell | 1.38e-17 | 354 |
macrophage dendritic cell progenitor | 2.89e-17 | 61 |
stem cell | 4.39e-17 | 441 |
connective tissue cell | 6.73e-17 | 361 |
somatic stem cell | 5.07e-16 | 433 |
multi fate stem cell | 8.56e-16 | 427 |
motile cell | 1.74e-14 | 386 |
myeloid cell | 1.69e-11 | 108 |
common myeloid progenitor | 1.69e-11 | 108 |
cardiac mesenchymal cell | 3.70e-10 | 4 |
migratory trunk neural crest cell | 3.70e-10 | 4 |
leukocyte | 5.07e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.63e-08 | 120 |
basophil | 1.93e-08 | 3 |
nongranular leukocyte | 1.32e-07 | 115 |
hair follicle cell | 1.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-19 | 76 |
bone element | 9.15e-19 | 82 |
connective tissue | 1.08e-16 | 371 |
skeletal element | 2.36e-16 | 90 |
skeletal system | 5.59e-15 | 100 |
immune system | 2.30e-14 | 93 |
hematopoietic system | 3.13e-13 | 98 |
blood island | 3.13e-13 | 98 |
hemolymphoid system | 2.72e-11 | 108 |
musculoskeletal system | 8.98e-10 | 167 |
right ovary | 2.29e-08 | 5 |
lateral plate mesoderm | 6.70e-08 | 203 |
mesoderm | 9.30e-08 | 315 |
mesoderm-derived structure | 9.30e-08 | 315 |
presumptive mesoderm | 9.30e-08 | 315 |
hair follicle | 1.40e-07 | 5 |
hair follicle placode | 1.40e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.31e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.