FFCP PHASE1:Hg19::chr12:93964746..93964767,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8835|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19382|TSSclassifier=S|UniProt=A8K3D1|association_with_transcript=0bp_to_ENST00000536696_5end|description=CAGE_peak_5_at_SOCS2_5end|id=chr12:93964746..93964767,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;1.90e-08;31|ontology_enrichment_disease_v019_2=DOID:8692,2.55e-09,31;DOID:1240,1.70e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000922;8.40e-07;49|ontology_enrichment_uberon_v019_2=|phase1_expression=1.09007027562334,0.642301571672949,1.12763523276777,0,1.34088328328186,0,0,0,1.30592814099919,1.22866968250754,0,0.436882744260345,0.791300934685361,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,0.626909442956176,1.43117993565528,0.136874425072884,0.376627918784408,0.152826811495903,0,0.0787107813136792,10.2274711980715,1.15148819429164,1.08371286321253,0.919421224478927,0.30120591877825,0.739508020333575,0,0,3.81680571135301,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,2.80254281490768,1.58030450865046,0.590129310341499,0,0.822405995998037,11.5358681819568,2.28145586643513,0.473447805734733,0,3.45372416344038,0.883817722424512,1.55073726208535,1.35401931882508,5.25174410875268,6.89314542067355,4.43982342429925,4.69795030235942,2.60822777161547,1.18629250529648,1.07016331235885,0,4.64568305060021,2.29932296161153,2.06176467289578,1.51811815211702,2.22995790026868,3.25541726928209,3.8018081777935,2.25862678616659,1.53583933385302,2.49861453104692,3.07810427657222,3.28451198768419,0.604820229674197,0.267440195783507,0.868946423296794,0,0.670700859703636,0.255725123687061,1.80719576192283,1.00267582127178,1.30361867064741,0,1.94653948121054,0.283604451492204,0.221729397462564,0.087834785693126,0.916853528483988,1.45718115317017,0.741568885568859,0.97364218096405,0.870648686496336,0.531831842075461,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0,1.29208379584664,1.06729878806013,1.67360306382335,0.805658634218294,1.52054421143703,2.4406205754817,0,0.81014194788176,0.446498641420399,0.22452937262617,1.12611480483322,1.53316637465883,0,0,1.31780417436063,0,1.74437620857014,0.993943903390637,0,0.264818361626438,0,0,0.560677600142307,0,0,0.933633106199299,0.404132016209064,0.163461903113459,0.605429710579726,1.72852777344,1.87457145467037,0.624320153660641,0,0.149448680551801,1.05691048779388,0.161872944368132,0.561803226808994,1.83738754129404,0.982674538494144,2.78979609174567,2.37600571456411,2.96720315134268,0,0,2.52504170931099,2.12701483782339,3.3247693858102,1.31693286264251,1.22595118319608,3.30523729594513,0.340296549480063,0.179389635688862,0.213557388818567,1.05965950579781,0.600182192168805,0.515262646192195,0.515281080091258,1.67505170698431,0.843881661206331,0.68205903612839,0.504867548488229,1.10459878370759,0.484938170456436,1.42003837006646,0.302256294682921,1.18692414617341,0.773043412653187,0.272746120590835,0.286804595389004,0.853815942907168,2.12047629314376,1.2781333715647,0.725627385107593,1.7662459561294,0,0,0,1.38134921352481,0,0,0,0,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0.738155454624648,1.40241773803446,1.2347220339942,0,0,0.982827216677626,1.77236972004421,0,0.491953754172454,0,1.64625428112938,1.1240175325762,0.603173834469785,0.462942225792648,0.325808305310325,3.11980435583874,0,0.579652024875384,0.117408694235822,0.433099343283221,0.925971025153221,0.951270761172991,5.53143078571493,2.57545848628462,0,0.234004265139238,0.148631162288728,0.93733833986777,0.671928512795438,1.70130116690864,1.88072897675981,2.3250715081117,0.383382679165211,0.985326475791887,4.4024217006613,2.48793738648926,3.89123874225796,4.4184851699233,1.52394946301206,1.90994212779139,1.17217447210047,0,1.7480673759565,1.8020583470635,0.857479297891735,0.336393253036082,0,0.51336800074665,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.57191197463259,2.17048642156577,0.823240336780769,0.977208552881205,0.710783897485092,0,0,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,2.4658731678576,0.788123040807709,0.862510299438069,1.28343036279748,1.01637849688985,1.30139853857622,1.54657762555539,2.84777651068393,3.82763250991898,0.749007023947182,0,0,0.36807447515742,0.500170521059677,0.271265023699736,1.24782516918484,1.42743191037729,0.630809660135739,2.22568688486155,0,0,0,0.664225598535437,0.184369168541703,0.695068915744663,0,0,0.206768026122887,0.8628568032744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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19382 | |||
|TSSclassifier=S | |||
|UniProt=A8K3D1 | |||
|association_with_transcript=0bp_to_ENST00000536696_5end | |||
|description=CAGE_peak_5_at_SOCS2_5end | |||
|id=chr12:93964746..93964767,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.90e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.55e-09,31;DOID:1240,1.70e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.40e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@SOCS2 | |||
}} |
Revision as of 01:02, 11 September 2013
Short description: | p5@SOCS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SOCS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536696_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | A8K3D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.55e-09 | 31 |
leukemia | 1.70e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.