FFCP PHASE1:Hg19::chr12:91398796..91398808,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1833|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3053|TSSclassifier=W|UniProt=Q99645,F8VSI4|association_with_transcript=0bp_to_ENST00000261172,ENST00000551767,NM_004950,uc001tbk.2_5end|coexpression_cluster_id=C216|description=CAGE_peak_2_at_EPYC_5end|id=chr12:91398796..91398808,-|ontology_enrichment_celltype=CL:0002541!1.34e-11!3;CL:1001319!1.16e-08!1;CL:1000600!1.16e-08!1;CL:0000062!3.74e-07!11;CL:0000375!3.74e-07!11;CL:0000335!3.74e-07!11|ontology_enrichment_celltype_v019=CL:0002541;3.33e-27;3!CL:0000062;1.02e-20;9!CL:0000153;9.87e-10;9!CL:0000447;9.87e-10;9!CL:0000214;7.50e-08;3|ontology_enrichment_celltype_v019_2=CL:0002541,3.11e-27,3;CL:0000062,4.34e-17,11;CL:0000375,4.34e-17,11;CL:0000335,4.34e-17,11;CL:0000153,1.01e-09,9;CL:0000447,1.01e-09,9;CL:0000214,7.76e-08,3|ontology_enrichment_development_v019=UBERON:0003124;1.88e-21;1!CL:0000335;4.34e-17;11|ontology_enrichment_disease=DOID:5662!4.19e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!4.40e-16!2;UBERON:0000476!1.34e-11!3;UBERON:0000920!1.34e-11!3;UBERON:0003124!6.94e-11!7;UBERON:0005631!2.86e-09!14;UBERON:0000158!2.86e-09!14;UBERON:0004645!1.16e-08!1;UBERON:0001256!1.16e-08!1;UBERON:0001259!1.16e-08!1|ontology_enrichment_uberon_v019=UBERON:0003124;3.33e-27;3!UBERON:0000920;3.33e-27;3!UBERON:0001474;1.05e-10;18!UBERON:0005631;7.22e-09;10!UBERON:0000158;7.22e-09;10!UBERON:0001434;1.63e-08;36!UBERON:0000478;4.25e-08;24!UBERON:0006915;7.50e-08;3!UBERON:0007616;7.50e-08;3!UBERON:0002217;7.50e-08;3!UBERON:0002018;7.50e-08;3!UBERON:0004765;1.36e-07;26|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.11e-27,3;UBERON:0003124,3.76e-26,7;UBERON:0005631,1.90e-13,14;UBERON:0000158,1.90e-13,14;UBERON:0000478,4.20e-08,24;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.75169719801128,10.8967663133829,14.6866909858647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65602783356607,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0.458146384663663,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.2824530800685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0794029276486,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713520544665411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p2@EPYC}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3053 | |||
|TSSclassifier=W | |||
|UniProt=Q99645,F8VSI4 | |||
|association_with_transcript=0bp_to_ENST00000261172,ENST00000551767,NM_004950,uc001tbk.2_5end | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_2_at_EPYC_5end | |||
|id=chr12:91398796..91398808,- | |||
|ontology_enrichment_celltype=CL:0002541!1.34e-11!3;CL:1001319!1.16e-08!1;CL:1000600!1.16e-08!1;CL:0000062!3.74e-07!11;CL:0000375!3.74e-07!11;CL:0000335!3.74e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.33e-27;3!CL:0000062;1.02e-20;9!CL:0000153;9.87e-10;9!CL:0000447;9.87e-10;9!CL:0000214;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.11e-27,3;CL:0000062,4.34e-17,11;CL:0000375,4.34e-17,11;CL:0000335,4.34e-17,11;CL:0000153,1.01e-09,9;CL:0000447,1.01e-09,9;CL:0000214,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.88e-21;1!CL:0000335;4.34e-17;11 | |||
|ontology_enrichment_disease=DOID:5662!4.19e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.40e-16!2;UBERON:0000476!1.34e-11!3;UBERON:0000920!1.34e-11!3;UBERON:0003124!6.94e-11!7;UBERON:0005631!2.86e-09!14;UBERON:0000158!2.86e-09!14;UBERON:0004645!1.16e-08!1;UBERON:0001256!1.16e-08!1;UBERON:0001259!1.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.33e-27;3!UBERON:0000920;3.33e-27;3!UBERON:0001474;1.05e-10;18!UBERON:0005631;7.22e-09;10!UBERON:0000158;7.22e-09;10!UBERON:0001434;1.63e-08;36!UBERON:0000478;4.25e-08;24!UBERON:0006915;7.50e-08;3!UBERON:0007616;7.50e-08;3!UBERON:0002217;7.50e-08;3!UBERON:0002018;7.50e-08;3!UBERON:0004765;1.36e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.11e-27,3;UBERON:0003124,3.76e-26,7;UBERON:0005631,1.90e-13,14;UBERON:0000158,1.90e-13,14;UBERON:0000478,4.20e-08,24;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.75169719801128,10.8967663133829,14.6866909858647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65602783356607,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0.458146384663663,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.2824530800685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0794029276486,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713520544665411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@EPYC | |||
}} |
Revision as of 00:55, 11 September 2013
Short description: | p2@EPYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EPYC_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 0bp_to_ENST00000261172, ENST00000551767, NM_004950, uc001tbk.2_5end |
EntrezGene: | EPYC |
HGNC: | 3053 |
UniProt: | Q99645F8VSI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.11e-27 | 3 |
osteoblast | 4.34e-17 | 11 |
osteoprogenitor cell | 4.34e-17 | 11 |
mesenchyme condensation cell | 4.34e-17 | 11 |
GAG secreting cell | 1.01e-09 | 9 |
carbohydrate secreting cell | 1.01e-09 | 9 |
synovial cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.11e-27 | 3 |
chorion | 3.76e-26 | 7 |
extraembryonic membrane | 1.90e-13 | 14 |
membranous layer | 1.90e-13 | 14 |
extraembryonic structure | 4.20e-08 | 24 |
stratified squamous epithelium | 7.76e-08 | 3 |
layer of synovial tissue | 7.76e-08 | 3 |
synovial joint | 7.76e-08 | 3 |
synovial membrane of synovial joint | 7.76e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.