FFCP PHASE1:Hg19::chr12:78959588..78959592,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C267|description=CAGE_peak_at_chr12:78959588..78959592,+|id=chr12:78959588..78959592,+|ontology_enrichment_celltype=CL:0002557!5.62e-19!1;CL:0002195!2.72e-10!2;CL:0002571!2.72e-10!2|ontology_enrichment_celltype_v019=CL:0000083;5.56e-26;4!CL:0000182;1.33e-09;12|ontology_enrichment_celltype_v019_2=CL:0000083,5.56e-26,4;CL:0000182,1.33e-09,12;CL:0000223,4.33e-08,58|ontology_enrichment_development_v019=UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13|ontology_enrichment_disease=DOID:1799!8.95e-20!1;DOID:10165!8.95e-20!1;DOID:1798!8.95e-20!1|ontology_enrichment_disease_v019=DOID:1799;9.37e-99;1!DOID:10165;9.37e-99;1!DOID:1798;9.37e-99;1!DOID:1793;5.56e-26;4!DOID:170;7.67e-18;6|ontology_enrichment_disease_v019_2=DOID:1799,9.37e-99,1;DOID:10165,9.37e-99,1;DOID:1798,9.37e-99,1;DOID:1793,5.56e-26,4;DOID:170,7.67e-18,6|ontology_enrichment_uberon=UBERON:0004145!7.02e-25!3;UBERON:0002134!1.30e-19!1;UBERON:0005208!1.30e-19!1;UBERON:0005946!1.30e-19!1;UBERON:0005965!1.30e-19!1;UBERON:0002078!1.30e-19!1;UBERON:0002081!1.72e-10!2;UBERON:0002133!1.72e-10!2;UBERON:0007497!3.58e-10!2;UBERON:0003643!3.58e-10!2;UBERON:0003504!3.58e-10!2;UBERON:0003469!3.58e-10!2;UBERON:0003496!3.58e-10!2;UBERON:0004797!3.58e-10!2;UBERON:0002012!3.58e-10!2;UBERON:0008886!3.58e-10!2;UBERON:0007303!3.58e-10!2;UBERON:0002061!3.58e-10!2;UBERON:0005432!3.58e-10!2;UBERON:0004363!3.58e-10!2;UBERON:0003978!2.05e-07!3;UBERON:0009751!2.05e-07!3;UBERON:0004151!2.05e-07!3;UBERON:0000946!2.05e-07!3;UBERON:0002523!2.05e-07!3;UBERON:0005983!2.05e-07!3;UBERON:0002165!2.05e-07!3;UBERON:0002062!2.05e-07!3;UBERON:0007280!2.05e-07!3;UBERON:0010188!3.35e-07!3;UBERON:0002539!3.35e-07!3;UBERON:0008816!3.35e-07!3|ontology_enrichment_uberon_v019=UBERON:0001264;2.73e-11;10!UBERON:0000949;3.68e-09;43!UBERON:0002075;7.18e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.73e-11,10;UBERON:0000949,4.55e-10,45;UBERON:0002075,7.18e-07,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6667748909597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:78959588..78959592,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_at_chr12:78959588..78959592,+ | |||
|id=chr12:78959588..78959592,+ | |||
|ontology_enrichment_celltype=CL:0002557!5.62e-19!1;CL:0002195!2.72e-10!2;CL:0002571!2.72e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000083;5.56e-26;4!CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,5.56e-26,4;CL:0000182,1.33e-09,12;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | |||
|ontology_enrichment_disease=DOID:1799!8.95e-20!1;DOID:10165!8.95e-20!1;DOID:1798!8.95e-20!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.37e-99;1!DOID:10165;9.37e-99;1!DOID:1798;9.37e-99;1!DOID:1793;5.56e-26;4!DOID:170;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.37e-99,1;DOID:10165,9.37e-99,1;DOID:1798,9.37e-99,1;DOID:1793,5.56e-26,4;DOID:170,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0004145!7.02e-25!3;UBERON:0002134!1.30e-19!1;UBERON:0005208!1.30e-19!1;UBERON:0005946!1.30e-19!1;UBERON:0005965!1.30e-19!1;UBERON:0002078!1.30e-19!1;UBERON:0002081!1.72e-10!2;UBERON:0002133!1.72e-10!2;UBERON:0007497!3.58e-10!2;UBERON:0003643!3.58e-10!2;UBERON:0003504!3.58e-10!2;UBERON:0003469!3.58e-10!2;UBERON:0003496!3.58e-10!2;UBERON:0004797!3.58e-10!2;UBERON:0002012!3.58e-10!2;UBERON:0008886!3.58e-10!2;UBERON:0007303!3.58e-10!2;UBERON:0002061!3.58e-10!2;UBERON:0005432!3.58e-10!2;UBERON:0004363!3.58e-10!2;UBERON:0003978!2.05e-07!3;UBERON:0009751!2.05e-07!3;UBERON:0004151!2.05e-07!3;UBERON:0000946!2.05e-07!3;UBERON:0002523!2.05e-07!3;UBERON:0005983!2.05e-07!3;UBERON:0002165!2.05e-07!3;UBERON:0002062!2.05e-07!3;UBERON:0007280!2.05e-07!3;UBERON:0010188!3.35e-07!3;UBERON:0002539!3.35e-07!3;UBERON:0008816!3.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.73e-11;10!UBERON:0000949;3.68e-09;43!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.73e-11,10;UBERON:0000949,4.55e-10,45;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6667748909597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:78959588..78959592,+ | |||
}} |
Revision as of 00:33, 11 September 2013
Short description: | p@chr12:78959588..78959592, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:78959588..78959592, + |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 5.56e-26 | 4 |
hepatocyte | 1.33e-09 | 12 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.73e-11 | 10 |
endocrine system | 4.55e-10 | 45 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.37e-99 | 1 |
endocrine pancreas cancer | 9.37e-99 | 1 |
pancreatic endocrine carcinoma | 9.37e-99 | 1 |
pancreatic cancer | 5.56e-26 | 4 |
endocrine gland cancer | 7.67e-18 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.